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Changes for page 05. Data processing

Last modified by tabermah on 2024-12-11 11:17
From version 14.1
edited by hakanj
on 2020-12-18 14:57
Change comment: There is no comment for this version
To version 15.1
edited by hakanj
on 2020-12-18 14:59
Change comment: There is no comment for this version

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3 -**10.1. Automatic data processing**
3 +**11.1. Automatic data processing**
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5 5  Unless you un-check the option for the specific acquisition run, autoprocessing will be executed. For standard rotational data autoprocessing is via XDSAPP (Sparta et al. (2016) //J. Apple. Cryst.// **49**, 1085-1092) for strategy calculation we use Mosflm (Leslie //Acta D//**62** (2006) 48-57) and Spotfinder ((% style="color: rgb(0,0,0);text-decoration: none;" %)Zhang et al. (2006). (% style="text-decoration: none;text-align: left;" %)//J. Appl. Cryst.//(% style="color: rgb(0,0,0);text-decoration: none;" %) (% style="text-decoration: none;text-align: left;" %)**39**(% style="color: rgb(0,0,0);text-decoration: none;" %), 112–119)(%%) for producing the heatmap for the grid scans. The results are compiled into HTML-files to give you a convenient way of checking them. The output files are in the processed folders of the corresponding datasets.  A self refreshing index of all results is created in the beamtimes processed folder. During the beamtime you can open it from file::~/~//gpfs/current/processed/index.html in a browser. The HTML-file is also contained in your data backup.
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9 -**10.3. Manual data processing onsite**
9 +**11.2. Manual data processing onsite**
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11 11  Open a terminal (see session 3.2) and type ssh haspp11eval01. Please do not use the control computers of the beamline (haspp11user01-04) for data processing.
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22 -**10.4. Manual data processing after your beamtime or during remote session**
22 +**11.3. Manual data processing after your beamtime or during remote session**
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24 24  Manual data processing after the beamtime or during a remote session is only available for registered [[DESY Science Accounts>>doc:FSEC.Science Accounts.WebHome||shape="rect"]].
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1 -188798288
1 +200517675
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1 -https://confluence.desy.de/spaces/11/pages/188798288/11. Data processing
1 +https://confluence.desy.de/spaces/11/pages/200517675/11. Data processing