Changes for page CFEL TapeDrive: Serial Crystallography
Last modified by chatzies on 2025-11-27 11:35
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... ... @@ -218,76 +218,21 @@ 218 218 219 219 === {{id name="14.SerialCrystallography:CFELTapeDrive-14.6Nozzleexchange"/}}**14.6 Nozzle exchange** === 220 220 221 - === {{id name="14.SerialCrystallography:CFELTapeDrive-14.7Chopper"/}}**14.7 Chopper** ===221 +\\ 222 222 223 -star t chopperguifromterminal:223 +=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.7Datacollection"/}}**14.7 Data collection** === 224 224 225 -(% class="code" %) 226 -((( 227 - cd /gpfs/local/shared/ChopperControl 228 -))) 229 - 230 -(% class="code" %) 231 -((( 232 - python chopperControl.py 233 -))) 234 - 235 ----- 236 -{{/layout-cell}} 237 -{{/layout-section}} 238 - 239 -{{layout-section ac:type="two_equal"}} 240 -{{layout-cell}} 241 - [[image:attach:20211212_233140.jpg||height="250"]] 242 -{{/layout-cell}} 243 - 244 -{{layout-cell}} 245 -**Chopper → no Chopper** 246 - 247 -* decrease frequency by max. 10 Hz steps\\ 248 -** click arrow down 10x, "Set", arrow down 10x, "Set", .... 249 -* at frequency = 10 Hz, click "Stop" 250 -* set "Hole" to <none> (% style="color: rgb(255,0,0);" %)//Takes some minutes// 251 - 252 -(% style="color: rgb(0,0,0);" %)**no Chopper → Chopper** 253 - 254 -* (% style="color: rgb(0,0,0);" %)set "Hole" to <Inner hole (largest)> (% style="color: rgb(255,0,0);" %)//Takes some minutes// 255 -* (% style="color: rgb(0,0,0);" %)increase frequency by max. 10 Hz steps 256 -** (% style="color: rgb(0,0,0);" %)click arrow up 10x, "Set", arrow up 10x, "Set", ..... 257 -* (% style="color: rgb(0,0,0);" %)//usually 133 Hz, results in exposure time of 3.7 ms// 258 -{{/layout-cell}} 259 -{{/layout-section}} 260 - 261 -{{layout-section ac:type="single"}} 262 -{{layout-cell}} 263 -=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.8Datacollection"/}}**14.8 Data collection** === 264 - 265 265 Once the hutch is interlocked, set remote control to the TapeDrive laptop by opening a terminal and executing the following command: 266 266 267 -(% class="code" %) 268 -((( 269 - xfreerdp +clipboard /size:1920x1080 /u:Cfelusr /v:cfeld-pcx22611 270 - password: written on control laptop (changes every 6 months) 271 -))) 227 + xfreerdp +clipboard /size:1920x1080 /u:Cfelusr /v:cfeld-pcx22611 228 + password: //written on control laptop (changes every 6 months)// 272 272 273 273 //>>usually the terminal is open, just repeat previous command with arrow up, enter and type in the password// 274 274 275 275 \\ 276 276 277 -Click "Start" icon in kamzik. 278 - 279 -[[image:attach:kamzik_run-tile.jpg||height="400"]] 280 - 281 ----- 282 -{{/layout-cell}} 283 -{{/layout-section}} 284 - 285 -{{layout-section ac:type="two_equal"}} 286 -{{layout-cell}} 287 287 **Check list:** 288 288 289 -(% style="color: rgb(255,0,0);" %)//always after entering the hutch!// 290 - 291 291 * Open BS1 (//CrystalControl)// 292 292 * Put collimator in (//CrystalControl)// 293 293 * Check beamstop position = 27 000 (//Atk panel p11/motor/eh.3.09)// ... ... @@ -297,33 +297,52 @@ 297 297 298 298 \\ 299 299 300 -**Set run parameters and go 🏃💥** 245 +**Start run in kamzik 246 +** 301 301 302 -1. Set your desired No. of frames 303 -1. Match exposure time with chopper setting 304 -1. Check trigger setting and match to chopper setting 305 -1. Set detector distance to 200.0 mm, confirm with //enter// and click "<Call>" button next to it. 306 -1. To start the run, click "<Call>" next to //exposure time// 248 +Click "Start" icon in kamzik. 307 307 250 +[[image:attach:kamzik_run-tile.jpg||height="400"]] 251 + 252 +---- 253 +{{/layout-cell}} 254 +{{/layout-section}} 255 + 256 +{{layout-section ac:type="two_equal"}} 257 +{{layout-cell}} 308 308 \\ 309 309 310 -(% style="color: rgb(153,51,102);" %)**//Current bug~://** 260 +(% class="task-list" %) 261 +((( 262 +{{task reference="/Tasks/Task_16" status="InProgress"}} 263 +(% class="task-list" %) 264 +((( 265 +{{task reference="/Tasks/Task_22" status="InProgress"}} 266 +Set your desired No. of frames 267 +{{/task}} 311 311 312 -(% style="color: rgb(0,0,0);" %)You need to "Stop" run in kamzik manually after all images have been acquired. This moves the shield up and closes the fast shutter. Afterwards you can start a new run by clicking "<Call>". 269 +{{task reference="/Tasks/Task_17" status="InProgress"}} 270 +Match exposure time with chopper setting 271 +{{/task}} 313 313 273 +{{task reference="/Tasks/Task_18" status="InProgress"}} 274 +Check trigger setting and match to chopper setting 275 +{{/task}} 314 314 315 -(% style="color: rgb(0,0,0);" %)Check progress in terminal with: 277 +{{task reference="/Tasks/Task_19" status="InProgress"}} 278 +Set detector distance to 200.0 mm, confirm with //enter// and click "<Call>" button next to it. 279 +{{/task}} 316 316 317 -(% class="code" %) 318 -((( 319 - cd /gpfs/current/raw/scan_frames 320 - watch "ls -lrt <run number>/ | tail" 321 -\\\\\\\\ 281 +{{task reference="/Tasks/Task_20" status="InProgress"}} 282 +To start the run, click "<Call>" next to //exposure time// 283 +{{/task}} 322 322 ))) 285 +{{/task}} 286 +))) 323 323 {{/layout-cell}} 324 324 325 325 {{layout-cell}} 326 -(% class="wrapped relative-table"style="width: 100.0%;" %)290 +(% class="wrapped" %) 327 327 |=((( 328 328 Parameter 329 329 )))|=((( ... ... @@ -381,9 +381,7 @@ 381 381 )))|(% colspan="1" %)((( 382 382 read out of diode 383 383 )))|(% colspan="1" %)((( 384 -**~~ 0 !!! higher values indicate missaligned beam stop!!! 385 -Call local contact 386 -** 348 +**~~ 0 !!! higher values indicate missaligned beam stop!!!** 387 387 ))) 388 388 {{/layout-cell}} 389 389 {{/layout-section}} ... ... @@ -390,35 +390,16 @@ 390 390 391 391 {{layout-section ac:type="single"}} 392 392 {{layout-cell}} 393 -- ---355 +=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.8Troubleshooting"/}}14.8 Troubleshooting === 394 394 395 -=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.9Troubleshooting"/}}14.9 Troubleshooting === 396 - 397 397 * ((( 398 398 ==== {{id name="14.SerialCrystallography:CFELTapeDrive-Tapestopped"/}}Tape stopped ==== 399 - 400 -* Tape roll empty? 401 -* motor connected (icon green)? 402 402 ))) 403 - 404 -\\ 405 - 406 406 * ((( 407 407 ==== {{id name="14.SerialCrystallography:CFELTapeDrive-Nozzlemotorsarenotresponding"/}}Nozzle motors are not responding ==== 408 - 409 -* displayed in green=connected? 410 -* nozzle holder colliding somewhere? 411 -* motor limits reached? → position displayed in red 412 412 ))) 413 - 414 -\\ 415 - 416 416 * ((( 417 417 ==== {{id name="14.SerialCrystallography:CFELTapeDrive-Sampleflowisnotrespondingtohigherpressure"/}}Sample flow is not responding to higher pressure ==== 418 - 419 -* channel turned on? 420 -* Sample empty? 421 -* Nozzle or lines clogged? → flush with water, change nozzle 422 422 ))) 423 423 {{/layout-cell}} 424 424 {{/layout-section}}
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... ... @@ -1,1 +1,1 @@ 1 -2368245 891 +236824567 - URL
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... ... @@ -1,1 +1,1 @@ 1 -https://confluence.desy.de/spaces/11/pages/2368245 89/14. Serial Crystallography: CFEL TapeDrive1 +https://confluence.desy.de/spaces/11/pages/236824567/14. Serial Crystallography: CFEL TapeDrive