Changes for page CFEL TapeDrive: Serial Crystallography
Last modified by chatzies on 2025-11-27 11:35
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... ... @@ -1,8 +1,12 @@ 1 1 {{layout}} 2 2 {{layout-section ac:type="single"}} 3 3 {{layout-cell}} 4 -[[image:attach:TapeDrive_beschriftet-tile.jpg||height="250"]] 5 5 5 + 6 +{{toc/}} 7 + 8 +[[image:attach:TapeDrive_beschriftet-tile.jpg||height="400"]] 9 + 6 6 \\ 7 7 8 8 \\ ... ... @@ -212,81 +212,23 @@ 212 212 213 213 \\ 214 214 215 -=== {{id name="14.SerialCrystallography:CFELTapeDrive-"/}}** 216 -** === 217 -{{/layout-cell}} 218 -{{/layout-section}} 219 +=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.6Nozzleexchange"/}}**14.6 Nozzle exchange** === 219 219 220 -{{layout-section ac:type="single"}} 221 -{{layout-cell}} 222 -=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.7Chopper"/}}**14.7 Chopper** === 221 +\\ 223 223 224 -star t chopperguifromterminal:223 +=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.7Datacollection"/}}**14.7 Data collection** === 225 225 226 -(% class="code" %) 227 -((( 228 - cd /gpfs/local/shared/ChopperControl 229 -))) 230 - 231 -(% class="code" %) 232 -((( 233 - python chopperControl.py 234 -))) 235 -{{/layout-cell}} 236 -{{/layout-section}} 237 - 238 -{{layout-section ac:type="two_equal"}} 239 -{{layout-cell}} 240 - [[image:attach:20211212_233140.jpg||height="250"]] 241 -{{/layout-cell}} 242 - 243 -{{layout-cell}} 244 -**Chopper → no Chopper** 245 - 246 -* decrease frequency by max. 10 Hz steps\\ 247 -** click arrow down 10x, "Set", arrow down 10x, "Set", .... 248 -* at frequency = 10 Hz, click "Stop" 249 -* set "Hole" to <none> (% style="color: rgb(255,0,0);" %)//Takes some minutes// 250 - 251 -(% style="color: rgb(0,0,0);" %)**no Chopper → Chopper** 252 - 253 -* (% style="color: rgb(0,0,0);" %)set "Hole" to <Inner hole (largest)> (% style="color: rgb(255,0,0);" %)//Takes some minutes// 254 -* (% style="color: rgb(0,0,0);" %)increase frequency by max. 10 Hz steps 255 -** (% style="color: rgb(0,0,0);" %)click arrow up 10x, "Set", arrow up 10x, "Set", ..... 256 -* (% style="color: rgb(0,0,0);" %)//usually 133 Hz, results in exposure time of 3.7 ms// 257 -{{/layout-cell}} 258 -{{/layout-section}} 259 - 260 -{{layout-section ac:type="single"}} 261 -{{layout-cell}} 262 -=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.8Datacollection"/}}**14.8 Data collection** === 263 - 264 264 Once the hutch is interlocked, set remote control to the TapeDrive laptop by opening a terminal and executing the following command: 265 265 266 -(% class="code" %) 267 -((( 268 - xfreerdp +clipboard /size:1920x1080 /u:Cfelusr /v:cfeld-pcx22611 269 - password: written on control laptop (changes every 6 months) 270 -))) 227 + xfreerdp +clipboard /size:1920x1080 /u:Cfelusr /v:cfeld-pcx22611 228 + password: //written on control laptop (changes every 6 months)// 271 271 272 272 //>>usually the terminal is open, just repeat previous command with arrow up, enter and type in the password// 273 273 274 274 \\ 275 275 276 -Click "Start" icon in kamzik. 277 - 278 -[[image:attach:kamzik_run-tile.jpg||height="400"]] 279 - 280 ----- 281 -{{/layout-cell}} 282 -{{/layout-section}} 283 - 284 -{{layout-section ac:type="two_equal"}} 285 -{{layout-cell}} 286 286 **Check list:** 287 287 288 -(% style="color: rgb(255,0,0);" %)//always after entering the hutch!// 289 - 290 290 * Open BS1 (//CrystalControl)// 291 291 * Put collimator in (//CrystalControl)// 292 292 * Check beamstop position = 27 000 (//Atk panel p11/motor/eh.3.09)// ... ... @@ -296,33 +296,44 @@ 296 296 297 297 \\ 298 298 299 -**Set run parameters and go 🏃💥** 245 +**Start run in kamzik 246 +** 300 300 301 -1. Set your desired No. of frames 302 -1. Match exposure time with chopper setting 303 -1. Check trigger setting and match to chopper setting 304 -1. Set detector distance to 200.0 mm, confirm with //enter// and click "<Call>" button next to it. 305 -1. To start the run, click "<Call>" next to //exposure time// 248 +Click "Start" icon in kamzik. 306 306 307 - \\250 +[[image:attach:kamzik_run-tile.jpg||height="400"]] 308 308 309 -(% style="color: rgb(153,51,102);" %)**//Current bug~://** 252 +---- 253 +{{/layout-cell}} 254 +{{/layout-section}} 310 310 311 -(% style="color: rgb(0,0,0);" %)You need to "Stop" run in kamzik manually after all images have been acquired. This moves the shield up and closes the fast shutter. Afterwards you can start a new run by clicking "<Call>". 256 +{{layout-section ac:type="two_equal"}} 257 +{{layout-cell}} 258 +(% class="task-list" %) 259 +((( 260 +{{task reference="/Tasks/Task_16" status="InProgress"}} 261 +Set your desired No. of frames 262 +{{/task}} 312 312 264 +{{task reference="/Tasks/Task_17" status="InProgress"}} 265 +Match exposure time with chopper setting 266 +{{/task}} 313 313 314 -(% style="color: rgb(0,0,0);" %)Check progress in terminal with: 268 +{{task reference="/Tasks/Task_18" status="InProgress"}} 269 +Check trigger setting and match to chopper setting 270 +{{/task}} 315 315 316 -(% class="code" %) 317 -((( 318 - cd /gpfs/current/raw/scan_frames 319 - watch "ls -lrt <run number>/ | tail" 320 -\\\\\\\\ 272 +{{task reference="/Tasks/Task_19" status="InProgress"}} 273 +Set detector distance to 200.0 mm, confirm with //enter// and click "<Call>" button next to it. 274 +{{/task}} 275 + 276 +{{task reference="/Tasks/Task_20" status="InProgress"}} 277 +To start the run, click "<Call>" next to //exposure time// 278 +{{/task}} 321 321 ))) 322 322 {{/layout-cell}} 323 323 324 324 {{layout-cell}} 325 -(% class="wrapped relative-table" style="width: 100.0%;" %) 326 326 |=((( 327 327 Parameter 328 328 )))|=((( ... ... @@ -380,9 +380,7 @@ 380 380 )))|(% colspan="1" %)((( 381 381 read out of diode 382 382 )))|(% colspan="1" %)((( 383 -**~~ 0 !!! higher values indicate missaligned beam stop!!! 384 -Call local contact 385 -** 340 +**~~ 0 !!! higher values indicate missaligned beam stop!!!** 386 386 ))) 387 387 {{/layout-cell}} 388 388 {{/layout-section}} ... ... @@ -389,35 +389,16 @@ 389 389 390 390 {{layout-section ac:type="single"}} 391 391 {{layout-cell}} 392 -- ---347 +=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.8Troubleshooting"/}}14.8 Troubleshooting === 393 393 394 -=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.9Troubleshooting"/}}14.9 Troubleshooting === 395 - 396 396 * ((( 397 397 ==== {{id name="14.SerialCrystallography:CFELTapeDrive-Tapestopped"/}}Tape stopped ==== 398 - 399 -* Tape roll empty? 400 -* motor connected (icon green)? 401 401 ))) 402 - 403 -\\ 404 - 405 405 * ((( 406 406 ==== {{id name="14.SerialCrystallography:CFELTapeDrive-Nozzlemotorsarenotresponding"/}}Nozzle motors are not responding ==== 407 - 408 -* displayed in green=connected? 409 -* nozzle holder colliding somewhere? 410 -* motor limits reached? → position displayed in red 411 411 ))) 412 - 413 -\\ 414 - 415 415 * ((( 416 416 ==== {{id name="14.SerialCrystallography:CFELTapeDrive-Sampleflowisnotrespondingtohigherpressure"/}}Sample flow is not responding to higher pressure ==== 417 - 418 -* channel turned on? 419 -* Sample empty? 420 -* Nozzle or lines clogged? → flush with water, change nozzle 421 421 ))) 422 422 {{/layout-cell}} 423 423 {{/layout-section}}
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... ... @@ -1,1 +1,1 @@ 1 -2368245 931 +236824566 - URL
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... ... @@ -1,1 +1,1 @@ 1 -https://confluence.desy.de/spaces/11/pages/2368245 93/14. Serial Crystallography: CFEL TapeDrive1 +https://confluence.desy.de/spaces/11/pages/236824566/14. Serial Crystallography: CFEL TapeDrive