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Last modified by chatzies on 2025-11-27 11:35
From version 52.1
edited by ahenkel
on 2022-04-04 19:46
Change comment: There is no comment for this version
To version 46.1
edited by ahenkel
on 2021-12-12 23:53
Change comment: There is no comment for this version

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... ... @@ -9,8 +9,6 @@
9 9  
10 10  \\
11 11  
12 -----
13 -
14 14  == {{id name="14.SerialCrystallography:CFELTapeDrive-14.1Samplecharacteristicsandpreparation"/}}**14.1 Sample characteristics and preparation** ==
15 15  
16 16  suspension of microcrystals, **at least** 200 µL with 20% crystal density(more is always better), size range: 2-30 µm, **tip:** bring some mother liquor for washing, filtering, diluting etc.
... ... @@ -23,8 +23,6 @@
23 23  
24 24  \\
25 25  
26 -----
27 -
28 28  == {{id name="14.SerialCrystallography:CFELTapeDrive-14.2ConnectingsampletoElveFlow,sampleexchange"/}}**14.2 Connecting sample to ElveFlow, sample exchange
29 29  ** ==
30 30  
... ... @@ -44,8 +44,6 @@
44 44  
45 45  \\
46 46  
47 -----
48 -
49 49  == {{id name="14.SerialCrystallography:CFELTapeDrive-14.3TapeDriveoperation"/}}**14.3 TapeDrive operation
50 50  ** ==
51 51  
... ... @@ -145,10 +145,8 @@
145 145  
146 146  \\
147 147  
148 -----
142 +== {{id name="14.SerialCrystallography:CFELTapeDrive-14.5Taperollexchange"/}}**14.5 Tape roll exchange** ==
149 149  
150 -== {{id name="14.SerialCrystallography:CFELTapeDrive-14.4Taperollexchange"/}}**14.4 Tape roll exchange** ==
151 -
152 152  The tape stops automatically at 98% used length, if you need to change the rolls for orther reasons, stop the tape (velocity = 0.0 mm/s).
153 153  
154 154  * Remove the (almost) empty feeder roll by pulling it upwards.
... ... @@ -170,17 +170,15 @@
170 170  
171 171  \\
172 172  
173 -**
174 -**
165 +=== {{id name="14.SerialCrystallography:CFELTapeDrive-"/}}**
166 +** ===
175 175  {{/layout-cell}}
176 176  {{/layout-section}}
177 177  
178 178  {{layout-section ac:type="single"}}
179 179  {{layout-cell}}
180 -----
172 +== {{id name="14.SerialCrystallography:CFELTapeDrive-14.7Chopper"/}}**14.7 Chopper** ==
181 181  
182 -== {{id name="14.SerialCrystallography:CFELTapeDrive-14.5Chopper"/}}**14.5 Chopper** ==
183 -
184 184  start chopper gui from terminal:
185 185  
186 186  (% class="code" %)
... ... @@ -191,7 +191,6 @@
191 191  (% class="code" %)
192 192  (((
193 193   python chopperControl.py
194 -\\\\
195 195  )))
196 196  {{/layout-cell}}
197 197  {{/layout-section}}
... ... @@ -218,9 +218,9 @@
218 218  {{/layout-cell}}
219 219  {{/layout-section}}
220 220  
221 -{{layout-section ac:type="two_equal"}}
210 +{{layout-section ac:type="single"}}
222 222  {{layout-cell}}
223 -== {{id name="14.SerialCrystallography:CFELTapeDrive-14.6Datacollection"/}}**14.6 Data collection** ==
212 +== {{id name="14.SerialCrystallography:CFELTapeDrive-14.8Datacollection"/}}**14.8 Data collection** ==
224 224  
225 225  Once the hutch is interlocked, set remote control to the TapeDrive laptop by opening a terminal and executing the following command:
226 226  
... ... @@ -230,43 +230,33 @@
230 230   password: written on control laptop (changes every 6 months)
231 231  )))
232 232  
233 - //>>usually the terminal is open, just repeat previous command with arrow up, enter and type in the password//
222 + //>>usually the terminal is open, just repeat previous command with arrow up, enter and type in the password//
234 234  
235 235  \\
236 236  
237 -**Check list:**
226 +Click "Start" icon in kamzik.
238 238  
239 -(% style="color: rgb(255,0,0);" %)//always after entering the hutch!//
228 +[[image:attach:kamzik_run-tile.jpg||height="400"]]
240 240  
241 -(% style="color: rgb(0,0,0);" %)Click "Safety" icon in kamzik.
242 -
243 -* Put collimator in
244 -** Click "<Call>" next to //collimator_in//
245 -
246 -\\
247 -
248 -* Open beam shutter BS1 in //CrystalControl//
230 +----
249 249  {{/layout-cell}}
250 -
251 -{{layout-cell}}
252 -[[image:attach:kamzik_safety.PNG||height="400"]]
253 -{{/layout-cell}}
254 254  {{/layout-section}}
255 255  
256 -{{layout-section ac:type="single"}}
234 +{{layout-section ac:type="two_equal"}}
257 257  {{layout-cell}}
258 -----
236 +**Check list:**
259 259  
260 -Click "Start/Run" icon in kamzik.
238 +(% style="color: rgb(255,0,0);" %)//always after entering the hutch!//
261 261  
262 -[[image:attach:kamzik_run-tile.jpg||height="400"]]
240 +* Open BS1  (//CrystalControl)//
241 +* Put collimator in (//CrystalControl)//
242 +* Check beamstop position = 27 000 (//Atk panel p11/motor/eh.3.09)//
243 +* Open fast shutter (//CrystalControl)//
244 +* Check diode voltage ~~ 0.0 (//kamzik Run/Diode voltage)//
245 +* Close fast shutter (//CrystalControl)//
263 263  
264 -----
265 -{{/layout-cell}}
266 -{{/layout-section}}
247 +\\
267 267  
268 -{{layout-section ac:type="two_equal"}}
269 -{{layout-cell}}
270 270  **Set run parameters and go 🏃💥**
271 271  
272 272  1. Set your desired No. of frames
... ... @@ -277,17 +277,19 @@
277 277  
278 278  \\
279 279  
280 -\\
259 +(% style="color: rgb(153,51,102);" %)**//Current bug~://**
281 281  
282 -**After data collection/Before entering the exp. hutch:**
261 +(% style="color: rgb(0,0,0);" %)You need to "Stop" run in kamzik manually after all images have been acquired. This moves the shield up and closes the fast shutter. Afterwards you can start a new run by clicking "<Call>".
283 283  
284 -1. Go to "Safety" in kamzik.
285 -1. Click "<Call>" next to //prepare_to_open_hutch. //This will automatically:
286 -11. Drive the collimator out
287 -11. Drive the detector back to 1500 mm
288 -1. Close beam shutter BS1 and break door interlock in //P11 XRayFeed //(monitor top left).
289 289  
290 -[[image:attach:Screenshot from 2022-04-04 19-36-29.png||height="400"]]
264 +(% style="color: rgb(0,0,0);" %)Check progress in terminal with:
265 +
266 +(% class="code" %)
267 +(((
268 + cd /gpfs/current/raw/scan_frames
269 + watch "ls -lrt <run number>/ | tail"
270 +\\\\\\\\
271 +)))
291 291  {{/layout-cell}}
292 292  
293 293  {{layout-cell}}
... ... @@ -360,7 +360,7 @@
360 360  {{layout-cell}}
361 361  ----
362 362  
363 -== {{id name="14.SerialCrystallography:CFELTapeDrive-14.7Troubleshooting"/}}**14.7 Troubleshooting** ==
344 +== {{id name="14.SerialCrystallography:CFELTapeDrive-14.9Troubleshooting"/}}**14.9 Troubleshooting** ==
364 364  
365 365  * (((
366 366  ==== {{id name="14.SerialCrystallography:CFELTapeDrive-Tapestopped"/}}Tape stopped ====
... ... @@ -388,41 +388,6 @@
388 388  * Sample empty?
389 389  * Nozzle or lines clogged? → flush with water, change nozzle
390 390  )))
391 -
392 -\\
393 -
394 -* (((
395 -==== {{id name="14.SerialCrystallography:CFELTapeDrive-Simplonfilewriter/eigerstreamissues"/}}Simplon filewriter/eiger stream issues ====
396 -
397 -* First, restart kamzik (server+client) and see if this solves the issue
398 -* If not, restart the Simplon server (in Astor → haspp11exp03, right click on Simplon/EH.1 and restart)
399 -* (((
400 -If nothing works, kill the Simplon process and then start the server again:* (((
401 -(% class="code" %)
402 -(((
403 -ssh haspp11exp03
404 -)))
405 -)))
406 -* (((
407 -(% class="code" %)
408 -(((
409 -ps -ef | grep Simplon
410 -)))
411 -)))
412 -* (((
413 -(% class="code" %)
414 -(((
415 -kill -9 simplon_process_id
416 -)))
417 -)))
418 -)))
419 -)))
420 420  {{/layout-cell}}
421 421  {{/layout-section}}
422 -
423 -{{layout-section ac:type="single"}}
424 -{{layout-cell}}
425 -\\
426 -{{/layout-cell}}
427 -{{/layout-section}}
428 428  {{/layout}}
Confluence.Code.ConfluencePageClass[0]
Id
... ... @@ -1,1 +1,1 @@
1 -250178640
1 +236824598
URL
... ... @@ -1,1 +1,1 @@
1 -https://confluence.desy.de/spaces/11/pages/250178640/14. Serial Crystallography: CFEL TapeDrive
1 +https://confluence.desy.de/spaces/11/pages/236824598/14. Serial Crystallography: CFEL TapeDrive