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Last modified by chatzies on 2025-11-27 11:35
From version 64.1
edited by ahenkel
on 2022-04-19 14:21
Change comment: There is no comment for this version
To version 76.1
edited by ahenkel
on 2022-11-02 16:25
Change comment: There is no comment for this version

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... ... @@ -214,12 +214,15 @@
214 214  * (% style="color: rgb(0,0,0);" %)set "Hole" to <Inner hole (largest)> (% style="color: rgb(255,0,0);" %)//Takes some minutes//
215 215  * (% style="color: rgb(0,0,0);" %)increase frequency by max. 10 Hz steps
216 216  ** (% style="color: rgb(0,0,0);" %)click arrow up 10x, "Set", arrow up 10x, "Set", .....
217 -* (% style="color: rgb(0,0,0);" %)//usually 133 Hz, results in exposure time of 3.7 ms//
217 +* (% style="color: rgb(0,0,0);" %)//usually 130 Hz, results in exposure time of 3.7 ms (technical exposure will always be 7.7 ms, since max. frame rate is 130 Hz
218 +//
218 218  {{/layout-cell}}
219 219  {{/layout-section}}
220 220  
221 221  {{layout-section ac:type="single"}}
222 222  {{layout-cell}}
224 +----
225 +
223 223  == {{id name="14.SerialCrystallography:CFELTapeDrive-14.6Datacollection"/}}**14.6 Data collection** ==
224 224  
225 225  Once the hutch is interlocked, set remote control to the TapeDrive laptop by opening a terminal and executing the following command:
... ... @@ -226,7 +226,7 @@
226 226  
227 227  (% class="code" %)
228 228  (((
229 - xfreerdp +clipboard /size:1920x1080 /u:Cfelusr /v:cfeld-pcx22611
232 + xfreerdp +clipboard /size:1920x1080 /u:cfelusr /v:cfeld-tapetop
230 230   password: written on control laptop (changes every 6 months)
231 231  )))
232 232  
... ... @@ -242,60 +242,41 @@
242 242  
243 243  (% style="color: rgb(255,0,0);" %)//always after entering the hutch!//
244 244  
245 -(% style="color: rgb(0,0,0);" %)Click "Safety" icon in kamzik.
248 +(% style="color: rgb(0,0,0);" %)Click "Run" icon in kamzik.
246 246  
247 -* Put collimator in
248 -** Click "<Call>" next to //collimator_in//
250 +* Put detector distance 200 in //prepare_for_measurement (      )
251 +//
252 +* Click "<Call>" next to //prepare_for_measurement
253 +//This will:\\
254 +** drive the collimator in //IN// position
255 +** drive detector to 200 mm
249 249  
250 250  \\
251 251  
252 252  * Open beam shutter BS1 in //CrystalControl //or// P11 XRayFeed //
253 -{{/layout-cell}}
254 254  
255 -{{layout-cell}}
256 -[[image:attach:kamzik_safety.PNG||height="400"]]
257 -{{/layout-cell}}
258 -{{/layout-section}}
261 +\\
259 259  
260 -{{layout-section ac:type="single"}}
261 -{{layout-cell}}
262 -----
263 +//**Set run parameters and go 🏃💥**//
263 263  
264 -Click "Start/Run" icon in kamzik.
265 -
266 -[[image:attach:kamzik_run-tile.jpg||height="400"]]
267 -
268 -----
269 -{{/layout-cell}}
270 -{{/layout-section}}
271 -
272 -{{layout-section ac:type="two_equal"}}
273 -{{layout-cell}}
274 -**Set run parameters and go 🏃💥**
275 -
276 276  1. Set your desired No. of frames
277 -1. Match exposure time with chopper setting
266 +1. Enter the protein ID of your crystal sample
267 +1. Match exposure time with chopper setting or set desired exposure time
278 278  1. Check trigger setting and match to chopper setting
279 -1. Set detector distance to 200.0 mm, confirm with //enter// and click "<Call>" button next to it.
280 -1. To start the run, click "<Call>" next to //exposure time//
269 +no chopper → external triffer //off
270 +// chopper → external trigger// on
271 +//
272 +1. To start the run, click "<Call>" next to //start_run (exposure    )//
273 +{{/layout-cell}}
281 281  
282 -\\
283 -
284 -\\
285 -
286 -**After data collection/Before entering the exp. hutch:**
287 -
288 -1. Go to "Safety" in kamzik.
289 -1. Click "<Call>" next to //prepare_to_open_hutch. //This will automatically:
290 -11. Drive the collimator out
291 -11. Drive the detector back to 1500 mm
292 -1. Close beam shutter BS1 and break door interlock in //P11 XRayFeed //(monitor top left).
293 -
294 -[[image:attach:Screenshot from 2022-04-04 19-36-29.png||height="400"]]
275 +{{layout-cell}}
276 +[[image:attach:Kamzik_run(2).PNG]]
295 295  {{/layout-cell}}
278 +{{/layout-section}}
296 296  
280 +{{layout-section ac:type="single"}}
297 297  {{layout-cell}}
298 -(% class="wrapped relative-table" style="width: 100.0%;" %)
282 +(% class="relative-table wrapped" style="width: 55.9569%;" %)
299 299  |=(((
300 300  Parameter
301 301  )))|=(((
... ... @@ -306,7 +306,7 @@
306 306  |(((
307 307  Images number
308 308  )))|(((
309 -Set number of frames you want to collect
293 +number of frames you want to collect
310 310  )))|(% colspan="1" %)(((
311 311  usually 100k - 200k, but adjust according to hitrate
312 312  
... ... @@ -319,10 +319,7 @@
319 319  
320 320  \\
321 321  )))|(% colspan="1" %)(((
322 -chopper at 133 Hz → 3.7 ms
323 -
324 -chopper at 66 Hz   → 7.7 ms
325 -
306 +with chopper         → opening time displayed in chopper GUI
326 326  no chopper            → 7.7 ms
327 327  
328 328  ----
... ... @@ -342,15 +342,45 @@
342 342  \\
343 343  )))
344 344  |(% colspan="1" %)(((
345 -move_detector (distance)
326 +protein ID
346 346  )))|(% colspan="1" %)(((
347 -Set detector distance
328 +protein ID of crystal sample (see AMARCORD)
348 348  )))|(% colspan="1" %)(((
349 -200.0 mm   (% style="color: rgb(255,0,0);" %)confirm with //enter//, click "<Call>"
330 +\\
350 350  )))
332 +
333 +----
351 351  {{/layout-cell}}
352 352  {{/layout-section}}
353 353  
337 +{{layout-section ac:type="two_equal"}}
338 +{{layout-cell}}
339 +**After data collection/Before entering the exp. hutch:**
340 +
341 +1. Go to "Safety" in kamzik.
342 +1. Click "<Call>" next to //prepare_to_open_hutch. //This will automatically:
343 +11. Drive the collimator out
344 +11. Drive the detector back to 1500 mm
345 +1. Close beam shutter BS1 and break door interlock in //P11 XRayFeed //(monitor top left).
346 +
347 +[[image:attach:Screenshot from 2022-04-04 19-36-29.png]]
348 +{{/layout-cell}}
349 +
350 +{{layout-cell}}
351 +\\
352 +
353 +\\
354 +
355 +\\
356 +
357 +\\
358 +
359 +\\
360 +
361 +[[image:attach:safety_kamzik.PNG]]
362 +{{/layout-cell}}
363 +{{/layout-section}}
364 +
354 354  {{layout-section ac:type="single"}}
355 355  {{layout-cell}}
356 356  ----
... ... @@ -411,6 +411,7 @@
411 411  )))
412 412  )))
413 413  )))
425 +* After the Simplon server is back up, close all kamzik windows and restart (first server, then client)
414 414  )))
415 415  {{/layout-cell}}
416 416  {{/layout-section}}
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Confluence.Code.ConfluencePageClass[0]
Id
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1 -254726572
1 +235031805
URL
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1 -https://confluence.desy.de/spaces/11/pages/254726572/14. Serial Crystallography: CFEL TapeDrive
1 +https://confluence.desy.de/spaces/11/pages/235031805/14. Serial Crystallography: CFEL TapeDrive