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Last modified by chatzies on 2025-11-27 11:35
From version 67.1
edited by ahenkel
on 2022-05-07 18:33
Change comment: There is no comment for this version
To version 76.1
edited by ahenkel
on 2022-11-02 16:25
Change comment: There is no comment for this version

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... ... @@ -214,7 +214,7 @@
214 214  * (% style="color: rgb(0,0,0);" %)set "Hole" to <Inner hole (largest)> (% style="color: rgb(255,0,0);" %)//Takes some minutes//
215 215  * (% style="color: rgb(0,0,0);" %)increase frequency by max. 10 Hz steps
216 216  ** (% style="color: rgb(0,0,0);" %)click arrow up 10x, "Set", arrow up 10x, "Set", .....
217 -* (% style="color: rgb(0,0,0);" %)//usually 133 Hz, results in exposure time of 3.7 ms (technical exposure will always be 7.7 ms, since max. frame rate is 133 Hz
217 +* (% style="color: rgb(0,0,0);" %)//usually 130 Hz, results in exposure time of 3.7 ms (technical exposure will always be 7.7 ms, since max. frame rate is 130 Hz
218 218  //
219 219  {{/layout-cell}}
220 220  {{/layout-section}}
... ... @@ -221,6 +221,8 @@
221 221  
222 222  {{layout-section ac:type="single"}}
223 223  {{layout-cell}}
224 +----
225 +
224 224  == {{id name="14.SerialCrystallography:CFELTapeDrive-14.6Datacollection"/}}**14.6 Data collection** ==
225 225  
226 226  Once the hutch is interlocked, set remote control to the TapeDrive laptop by opening a terminal and executing the following command:
... ... @@ -227,7 +227,7 @@
227 227  
228 228  (% class="code" %)
229 229  (((
230 - xfreerdp +clipboard /size:1920x1080 /u:Cfelusr /v:cfeld-pcx22611
232 + xfreerdp +clipboard /size:1920x1080 /u:cfelusr /v:cfeld-tapetop
231 231   password: written on control laptop (changes every 6 months)
232 232  )))
233 233  
... ... @@ -245,58 +245,39 @@
245 245  
246 246  (% style="color: rgb(0,0,0);" %)Click "Run" icon in kamzik.
247 247  
248 -* Put collimator in
249 -** Put detector distance 200 in //prepare_for_measurement (      )
250 +* Put detector distance 200 in //prepare_for_measurement (      )
250 250  //
251 -** Click "<Call>" next to //prepare_for_measurement//
252 +* Click "<Call>" next to //prepare_for_measurement
253 +//This will:\\
254 +** drive the collimator in //IN// position
255 +** drive detector to 200 mm
252 252  
253 253  \\
254 254  
255 255  * Open beam shutter BS1 in //CrystalControl //or// P11 XRayFeed //
256 -{{/layout-cell}}
257 257  
258 -{{layout-cell}}
259 -[[image:attach:kamzik_safety.PNG||height="400"]]
260 -{{/layout-cell}}
261 -{{/layout-section}}
261 +\\
262 262  
263 -{{layout-section ac:type="single"}}
264 -{{layout-cell}}
265 -----
263 +//**Set run parameters and go 🏃💥**//
266 266  
267 -[[image:attach:kamzik_run-tile.jpg||height="400"]]
268 -
269 -----
270 -{{/layout-cell}}
271 -{{/layout-section}}
272 -
273 -{{layout-section ac:type="two_equal"}}
274 -{{layout-cell}}
275 -**Set run parameters and go 🏃💥**
276 -
277 277  1. Set your desired No. of frames
266 +1. Enter the protein ID of your crystal sample
278 278  1. Match exposure time with chopper setting or set desired exposure time
279 279  1. Check trigger setting and match to chopper setting
280 -1. To start the run, click "<Call>" next to //start_run (exposure    )
269 +no chopper → external triffer //off
270 +// chopper → external trigger// on
281 281  //
272 +1. To start the run, click "<Call>" next to //start_run (exposure    )//
273 +{{/layout-cell}}
282 282  
283 -\\
284 -
285 -\\
286 -
287 -**After data collection/Before entering the exp. hutch:**
288 -
289 -1. Go to "Safety" in kamzik.
290 -1. Click "<Call>" next to //prepare_to_open_hutch. //This will automatically:
291 -11. Drive the collimator out
292 -11. Drive the detector back to 1500 mm
293 -1. Close beam shutter BS1 and break door interlock in //P11 XRayFeed //(monitor top left).
294 -
295 -[[image:attach:Screenshot from 2022-04-04 19-36-29.png||height="400"]]
275 +{{layout-cell}}
276 +[[image:attach:Kamzik_run(2).PNG]]
296 296  {{/layout-cell}}
278 +{{/layout-section}}
297 297  
280 +{{layout-section ac:type="single"}}
298 298  {{layout-cell}}
299 -(% class="wrapped relative-table" style="width: 100.0%;" %)
282 +(% class="relative-table wrapped" style="width: 55.9569%;" %)
300 300  |=(((
301 301  Parameter
302 302  )))|=(((
... ... @@ -307,7 +307,7 @@
307 307  |(((
308 308  Images number
309 309  )))|(((
310 -Set number of frames you want to collect
293 +number of frames you want to collect
311 311  )))|(% colspan="1" %)(((
312 312  usually 100k - 200k, but adjust according to hitrate
313 313  
... ... @@ -320,10 +320,7 @@
320 320  
321 321  \\
322 322  )))|(% colspan="1" %)(((
323 -chopper at 133 Hz → 7.7 ms (opening time will be 3.7)
324 -
325 -chopper at 66 Hz   → 7.7 ms
326 -
306 +with chopper         → opening time displayed in chopper GUI
327 327  no chopper            → 7.7 ms
328 328  
329 329  ----
... ... @@ -343,15 +343,45 @@
343 343  \\
344 344  )))
345 345  |(% colspan="1" %)(((
346 -move_detector (distance)
326 +protein ID
347 347  )))|(% colspan="1" %)(((
348 -Set detector distance
328 +protein ID of crystal sample (see AMARCORD)
349 349  )))|(% colspan="1" %)(((
350 -200.0 mm   (% style="color: rgb(255,0,0);" %)confirm with //enter//, click "<Call>"
330 +\\
351 351  )))
332 +
333 +----
352 352  {{/layout-cell}}
353 353  {{/layout-section}}
354 354  
337 +{{layout-section ac:type="two_equal"}}
338 +{{layout-cell}}
339 +**After data collection/Before entering the exp. hutch:**
340 +
341 +1. Go to "Safety" in kamzik.
342 +1. Click "<Call>" next to //prepare_to_open_hutch. //This will automatically:
343 +11. Drive the collimator out
344 +11. Drive the detector back to 1500 mm
345 +1. Close beam shutter BS1 and break door interlock in //P11 XRayFeed //(monitor top left).
346 +
347 +[[image:attach:Screenshot from 2022-04-04 19-36-29.png]]
348 +{{/layout-cell}}
349 +
350 +{{layout-cell}}
351 +\\
352 +
353 +\\
354 +
355 +\\
356 +
357 +\\
358 +
359 +\\
360 +
361 +[[image:attach:safety_kamzik.PNG]]
362 +{{/layout-cell}}
363 +{{/layout-section}}
364 +
355 355  {{layout-section ac:type="single"}}
356 356  {{layout-cell}}
357 357  ----
... ... @@ -412,6 +412,7 @@
412 412  )))
413 413  )))
414 414  )))
425 +* After the Simplon server is back up, close all kamzik windows and restart (first server, then client)
415 415  )))
416 416  {{/layout-cell}}
417 417  {{/layout-section}}
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Confluence.Code.ConfluencePageClass[0]
Id
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1 -254729368
1 +235031805
URL
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1 -https://confluence.desy.de/spaces/11/pages/254729368/14. Serial Crystallography: CFEL TapeDrive
1 +https://confluence.desy.de/spaces/11/pages/235031805/14. Serial Crystallography: CFEL TapeDrive