Skip to Content
Last modified by chatzies on 2025-11-27 11:35
From version 68.1
edited by ahenkel
on 2022-05-07 18:53
Change comment: There is no comment for this version
To version 76.1
edited by ahenkel
on 2022-11-02 16:25
Change comment: There is no comment for this version

Summary

Details

Page properties
Content
... ... @@ -214,7 +214,7 @@
214 214  * (% style="color: rgb(0,0,0);" %)set "Hole" to <Inner hole (largest)> (% style="color: rgb(255,0,0);" %)//Takes some minutes//
215 215  * (% style="color: rgb(0,0,0);" %)increase frequency by max. 10 Hz steps
216 216  ** (% style="color: rgb(0,0,0);" %)click arrow up 10x, "Set", arrow up 10x, "Set", .....
217 -* (% style="color: rgb(0,0,0);" %)//usually 133 Hz, results in exposure time of 3.7 ms (technical exposure will always be 7.7 ms, since max. frame rate is 133 Hz
217 +* (% style="color: rgb(0,0,0);" %)//usually 130 Hz, results in exposure time of 3.7 ms (technical exposure will always be 7.7 ms, since max. frame rate is 130 Hz
218 218  //
219 219  {{/layout-cell}}
220 220  {{/layout-section}}
... ... @@ -221,6 +221,8 @@
221 221  
222 222  {{layout-section ac:type="single"}}
223 223  {{layout-cell}}
224 +----
225 +
224 224  == {{id name="14.SerialCrystallography:CFELTapeDrive-14.6Datacollection"/}}**14.6 Data collection** ==
225 225  
226 226  Once the hutch is interlocked, set remote control to the TapeDrive laptop by opening a terminal and executing the following command:
... ... @@ -227,7 +227,7 @@
227 227  
228 228  (% class="code" %)
229 229  (((
230 - xfreerdp +clipboard /size:1920x1080 /u:Cfelusr /v:cfeld-pcx22611
232 + xfreerdp +clipboard /size:1920x1080 /u:cfelusr /v:cfeld-tapetop
231 231   password: written on control laptop (changes every 6 months)
232 232  )))
233 233  
... ... @@ -245,10 +245,12 @@
245 245  
246 246  (% style="color: rgb(0,0,0);" %)Click "Run" icon in kamzik.
247 247  
248 -* Put collimator in
249 -** Put detector distance 200 in //prepare_for_measurement (      )
250 +* Put detector distance 200 in //prepare_for_measurement (      )
250 250  //
251 -** Click "<Call>" next to //prepare_for_measurement//
252 +* Click "<Call>" next to //prepare_for_measurement
253 +//This will:\\
254 +** drive the collimator in //IN// position
255 +** drive detector to 200 mm
252 252  
253 253  \\
254 254  
... ... @@ -259,19 +259,23 @@
259 259  //**Set run parameters and go 🏃💥**//
260 260  
261 261  1. Set your desired No. of frames
266 +1. Enter the protein ID of your crystal sample
262 262  1. Match exposure time with chopper setting or set desired exposure time
263 263  1. Check trigger setting and match to chopper setting
269 +no chopper → external triffer //off
270 +// chopper → external trigger// on
271 +//
264 264  1. To start the run, click "<Call>" next to //start_run (exposure    )//
265 265  {{/layout-cell}}
266 266  
267 267  {{layout-cell}}
268 -[[image:attach:Kamzik_run(2).PNG||height="400"]]
276 +[[image:attach:Kamzik_run(2).PNG]]
269 269  {{/layout-cell}}
270 270  {{/layout-section}}
271 271  
272 -{{layout-section ac:type="two_equal"}}
280 +{{layout-section ac:type="single"}}
273 273  {{layout-cell}}
274 -(% class="relative-table" %)
282 +(% class="relative-table wrapped" style="width: 55.9569%;" %)
275 275  |=(((
276 276  Parameter
277 277  )))|=(((
... ... @@ -282,7 +282,7 @@
282 282  |(((
283 283  Images number
284 284  )))|(((
285 -Set number of frames you want to collect
293 +number of frames you want to collect
286 286  )))|(% colspan="1" %)(((
287 287  usually 100k - 200k, but adjust according to hitrate
288 288  
... ... @@ -295,10 +295,7 @@
295 295  
296 296  \\
297 297  )))|(% colspan="1" %)(((
298 -chopper at 133 Hz → 7.7 ms (opening time will be 3.7)
299 -
300 -chopper at 66 Hz   → 7.7 ms
301 -
306 +with chopper         → opening time displayed in chopper GUI
302 302  no chopper            → 7.7 ms
303 303  
304 304  ----
... ... @@ -318,14 +318,18 @@
318 318  \\
319 319  )))
320 320  |(% colspan="1" %)(((
321 -move_detector (distance)
326 +protein ID
322 322  )))|(% colspan="1" %)(((
323 -Set detector distance
328 +protein ID of crystal sample (see AMARCORD)
324 324  )))|(% colspan="1" %)(((
325 -200.0 mm   (% style="color: rgb(255,0,0);" %)confirm with //enter//, click "<Call>"
330 +\\
326 326  )))
332 +
333 +----
327 327  {{/layout-cell}}
335 +{{/layout-section}}
328 328  
337 +{{layout-section ac:type="two_equal"}}
329 329  {{layout-cell}}
330 330  **After data collection/Before entering the exp. hutch:**
331 331  
... ... @@ -335,8 +335,22 @@
335 335  11. Drive the detector back to 1500 mm
336 336  1. Close beam shutter BS1 and break door interlock in //P11 XRayFeed //(monitor top left).
337 337  
338 -[[image:attach:Screenshot from 2022-04-04 19-36-29.png||height="400"]]
347 +[[image:attach:Screenshot from 2022-04-04 19-36-29.png]]
339 339  {{/layout-cell}}
349 +
350 +{{layout-cell}}
351 +\\
352 +
353 +\\
354 +
355 +\\
356 +
357 +\\
358 +
359 +\\
360 +
361 +[[image:attach:safety_kamzik.PNG]]
362 +{{/layout-cell}}
340 340  {{/layout-section}}
341 341  
342 342  {{layout-section ac:type="single"}}
... ... @@ -399,6 +399,7 @@
399 399  )))
400 400  )))
401 401  )))
425 +* After the Simplon server is back up, close all kamzik windows and restart (first server, then client)
402 402  )))
403 403  {{/layout-cell}}
404 404  {{/layout-section}}
20211201_094101.jpg
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +5.8 MB
Content
20211201_094111.jpg
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +5.6 MB
Content
20211201_095033.jpg
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +3.1 MB
Content
20211201_095205.jpg
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +2.8 MB
Content
20211201_095232.jpg
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +7.2 MB
Content
20211201_095534.jpg
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +4.4 MB
Content
20211212_233140.jpg
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +6.5 MB
Content
Kamzik_run(2).PNG
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +134.4 KB
Content
Screenshot from 2022-04-04 19-36-29.png
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +133.0 KB
Content
TapeDrive coords.PNG
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +24.1 KB
Content
TapeDrive scheme.png
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +114.3 KB
Content
TapeDrive_beschriftet-tile.jpg
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +539.9 KB
Content
TapeDrive_beschriftet.PNG
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +337.8 KB
Content
kamzik_nozzle.PNG
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +120.5 KB
Content
kamzik_run-tile.jpg
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +466.4 KB
Content
kamzik_run.PNG
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +128.9 KB
Content
kamzik_safety.PNG
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +139.1 KB
Content
kamzik_tape.PNG
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +122.6 KB
Content
safety_kamzik.PNG
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +126.9 KB
Content
screen.PNG
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +94.0 KB
Content
server client.PNG
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +262.2 KB
Content
tape reset.PNG
Author
... ... @@ -1,0 +1,1 @@
1 +XWiki.ahenkel
Size
... ... @@ -1,0 +1,1 @@
1 +122.3 KB
Content
Confluence.Code.ConfluencePageClass[0]
Id
... ... @@ -1,1 +1,1 @@
1 -254729370
1 +235031805
URL
... ... @@ -1,1 +1,1 @@
1 -https://confluence.desy.de/spaces/11/pages/254729370/14. Serial Crystallography: CFEL TapeDrive
1 +https://confluence.desy.de/spaces/11/pages/235031805/14. Serial Crystallography: CFEL TapeDrive