Changes for page CFEL TapeDrive: Serial Crystallography
Last modified by chatzies on 2025-11-27 11:35
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... ... @@ -17,7 +17,7 @@ 17 17 18 18 Preparation: 19 19 20 -* filter through 30 µm cell filter (green) or 50 µm (yellow)into Eppendorf or Falcon (original!) tube20 +* filter through 30 µm cell filter (green) into Eppendorf or Falcon (original!) tube 21 21 22 22 [[image:attach:20211201_095534.jpg||height="250"]] 23 23 ... ... @@ -57,7 +57,7 @@ 57 57 58 58 ==== {{id name="14.SerialCrystallography:CFELTapeDrive-Tape"/}}**Tape** ==== 59 59 60 -* Click the 'main tape' icon 60 +* Click on the 'main tape' icon 61 61 * Change the velocity by typing anything from **0.3-3.0 mm/s** 62 62 * Common velocity is 1.0-1.5 mm/s 63 63 * kamzik displays the used tape in m and %. At 98% the tape will automatically stop since the rolls need to be exchanged at this point. ... ... @@ -66,7 +66,7 @@ 66 66 67 67 ==== {{id name="14.SerialCrystallography:CFELTapeDrive-Samplenozzle"/}}**Sample nozzle** ==== 68 68 69 -* Click on the 'nozzle' icon.69 +* Click an the 'nozzle' icon. 70 70 * ((( 71 71 The nozzle position can be adjusted in xyz by clicking on the arrows up and down. (Double arrow = 10 steps). Step size can be varied, 1mm steps are rather big and should be used carefully. 72 72 The absolute position is **not calibrated** and therefore changes after each restart of kamzik. ... ... @@ -214,15 +214,12 @@ 214 214 * (% style="color: rgb(0,0,0);" %)set "Hole" to <Inner hole (largest)> (% style="color: rgb(255,0,0);" %)//Takes some minutes// 215 215 * (% style="color: rgb(0,0,0);" %)increase frequency by max. 10 Hz steps 216 216 ** (% style="color: rgb(0,0,0);" %)click arrow up 10x, "Set", arrow up 10x, "Set", ..... 217 -* (% style="color: rgb(0,0,0);" %)//usually 133 Hz, results in exposure time of 3.7 ms (technical exposure will always be 7.7 ms, since max. frame rate is 133 Hz 218 -// 217 +* (% style="color: rgb(0,0,0);" %)//usually 133 Hz, results in exposure time of 3.7 ms// 219 219 {{/layout-cell}} 220 220 {{/layout-section}} 221 221 222 -{{layout-section ac:type=" single"}}221 +{{layout-section ac:type="two_equal"}} 223 223 {{layout-cell}} 224 ----- 225 - 226 226 == {{id name="14.SerialCrystallography:CFELTapeDrive-14.6Datacollection"/}}**14.6 Data collection** == 227 227 228 228 Once the hutch is interlocked, set remote control to the TapeDrive laptop by opening a terminal and executing the following command: ... ... @@ -236,44 +236,65 @@ 236 236 //>>usually the terminal is open, just repeat previous command with arrow up, enter and type in the password// 237 237 238 238 \\ 239 -{{/layout-cell}} 240 -{{/layout-section}} 241 241 242 -{{layout-section ac:type="two_left_sidebar"}} 243 -{{layout-cell}} 244 244 **Check list:** 245 245 246 246 (% style="color: rgb(255,0,0);" %)//always after entering the hutch!// 247 247 248 -(% style="color: rgb(0,0,0);" %)Click " Run" icon in kamzik.241 +(% style="color: rgb(0,0,0);" %)Click "Safety" icon in kamzik. 249 249 250 250 * Put collimator in 251 -** Put detector distance 200 in //prepare_for_measurement ( ) 252 -// 253 -** Click "<Call>" next to //prepare_for_measurement// 244 +** Click "<Call>" next to //collimator_in// 254 254 255 255 \\ 256 256 257 -* Open beam shutter BS1 in //CrystalControl //or// P11 XRayFeed // 248 +* Open beam shutter BS1 in //CrystalControl// 249 +{{/layout-cell}} 258 258 259 -\\ 251 +{{layout-cell}} 252 +[[image:attach:kamzik_safety.PNG||height="250"]] 253 +{{/layout-cell}} 254 +{{/layout-section}} 260 260 261 -//**Set run parameters and go 🏃💥**// 256 +{{layout-section ac:type="single"}} 257 +{{layout-cell}} 258 +---- 262 262 263 -1. Set your desired No. of frames 264 -1. Match exposure time with chopper setting or set desired exposure time 265 -1. Check trigger setting and match to chopper setting 266 -1. To start the run, click "<Call>" next to //start_run (exposure )// 260 +Click "Start/Run" icon in kamzik. 261 + 262 +[[image:attach:kamzik_run-tile.jpg||height="400"]] 263 + 264 +---- 267 267 {{/layout-cell}} 266 +{{/layout-section}} 268 268 268 +{{layout-section ac:type="two_equal"}} 269 269 {{layout-cell}} 270 -[[image:attach:Kamzik_run(2).PNG]] 270 +**Set run parameters and go 🏃💥** 271 + 272 +1. Set your desired No. of frames 273 +1. Match exposure time with chopper setting 274 +1. Check trigger setting and match to chopper setting 275 +1. Set detector distance to 200.0 mm, confirm with //enter// and click "<Call>" button next to it. 276 +1. To start the run, click "<Call>" next to //exposure time// 277 + 278 +\\ 279 + 280 +\\ 281 + 282 +**After data collection/Before entering the exp. hutch:** 283 + 284 +1. Go to "Safety" in kamzik. 285 +1. Click "<Call>" next to //prepare_to_open_hutch. //This will automatically: 286 +11. Drive the collimator out 287 +11. Drive the detector back to 1500 mm 288 +1. Close beam shutter BS1 and break door interlock in //P11 XRayFeed //(monitor top left). 289 + 290 +[[image:attach:Screenshot from 2022-04-04 19-36-29.png||height="400"]] 271 271 {{/layout-cell}} 272 -{{/layout-section}} 273 273 274 -{{layout-section ac:type="single"}} 275 275 {{layout-cell}} 276 -(% class="relative-table wrapped" %)294 +(% class="wrapped relative-table" style="width: 100.0%;" %) 277 277 |=((( 278 278 Parameter 279 279 )))|=((( ... ... @@ -297,7 +297,7 @@ 297 297 298 298 \\ 299 299 )))|(% colspan="1" %)((( 300 -chopper at 133 Hz → 7.7 ms(opening time will be 3.7)318 +chopper at 133 Hz → 3.7 ms 301 301 302 302 chopper at 66 Hz → 7.7 ms 303 303 ... ... @@ -326,29 +326,18 @@ 326 326 )))|(% colspan="1" %)((( 327 327 200.0 mm (% style="color: rgb(255,0,0);" %)confirm with //enter//, click "<Call>" 328 328 ))) 329 - 330 ----- 347 +|(% colspan="1" %)((( 348 +Diode voltage 349 +)))|(% colspan="1" %)((( 350 +read out of diode 351 +)))|(% colspan="1" %)((( 352 +**~~ 0 !!! higher values indicate missaligned beam stop!!! 353 +Call local contact 354 +** 355 +))) 331 331 {{/layout-cell}} 332 332 {{/layout-section}} 333 333 334 -{{layout-section ac:type="two_equal"}} 335 -{{layout-cell}} 336 -**After data collection/Before entering the exp. hutch:** 337 - 338 -1. Go to "Safety" in kamzik. 339 -1. Click "<Call>" next to //prepare_to_open_hutch. //This will automatically: 340 -11. Drive the collimator out 341 -11. Drive the detector back to 1500 mm 342 -1. Close beam shutter BS1 and break door interlock in //P11 XRayFeed //(monitor top left). 343 - 344 -[[image:attach:Screenshot from 2022-04-04 19-36-29.png]] 345 -{{/layout-cell}} 346 - 347 -{{layout-cell}} 348 -[[image:attach:safety_kamzik.PNG]] 349 -{{/layout-cell}} 350 -{{/layout-section}} 351 - 352 352 {{layout-section ac:type="single"}} 353 353 {{layout-cell}} 354 354 ----
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... ... @@ -1,1 +1,1 @@ 1 -25 47293731 +250178651 - URL
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... ... @@ -1,1 +1,1 @@ 1 -https://confluence.desy.de/spaces/11/pages/25 4729373/14. Serial Crystallography: CFEL TapeDrive1 +https://confluence.desy.de/spaces/11/pages/250178651/14. Serial Crystallography: CFEL TapeDrive