Changes for page CFEL TapeDrive: Serial Crystallography
Last modified by chatzies on 2025-11-27 11:35
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... ... @@ -1,1 +1,1 @@ 1 - 08. Serial Crystallography: CFEL TapeDrive1 +14. Serial Crystallography: CFEL TapeDrive - Author
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... ... @@ -1,1 +1,1 @@ 1 -XWiki. tabermah1 +XWiki.ahenkel - Content
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... ... @@ -1,31 +5,82 @@ 1 -{{layout}} 2 -{{layout-section ac:type="single"}} 3 -{{layout-cell}} 4 -[[image:attach:TapeDrive_beschriftet-tile.jpg||height="400"]] 5 5 6 6 7 7 {{toc/}} 8 8 5 +[[image:attach:TapeDrive_beschriftet-tile.jpg||height="400"]] 9 9 10 - ----7 +\\ 11 11 12 - = {{id name="14.SerialCrystallography:CFELTapeDrive-14.1Samplecharacteristicsandpreparation"/}}8.1. Sample characteristics and preparation =9 +\\ 13 13 14 - * Suspension of microcrystals, **at least** 200 µL with 20% crystal density (more is always better), size range: 2-30 µm, **tip:** bring some mother liquor for washing, filtering, diluting etc.11 +\\ 15 15 13 +=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.1RevertfromCrystallographytoTapeDrive(P11staff/CFEL)"/}}**14.1 Revert from Crystallography to TapeDrive (P11 staff/CFEL)** === 14 + 15 +* remove vortex 16 +* beamstop to out-position? 17 +* remove goniometer. The airbearing should be stopped (p11/servermotor/eh.1.01) 18 +* move cryojet out of the way, ramp the cryo up and shut it down. Close the compressed air to the shield flow. The biggest cable kinks and needs to be disconnected. 19 +* stop refill of the robot dewar and empty the dewar, warm up. 20 +* Disable backlight (unplug Festo connection). (% style="color: rgb(255,0,0);" %)//Is this still needed?// 21 +* (% style="color: rgb(0,0,0);" %)mount the 10 um diode and connect (via connector on the granite). This is connected to the leftmost Keithly (power up, check that settings are gain E06, Filter on, Rise time 1 ms. Keithly is connected to the oscilloscope and the delay generator, delay generator is connected to oscilloscope and detector, see diagram in P11 wiki. (% style="color: rgb(0, 0, 0); color: rgb(255, 0, 0)" %)//Insert here the setting for oscilloscope//(% style="color: rgb(0,0,0);" %)//. //Make sure to connect the multi-trigger to the back of the detector instead of the standard trigger, when starting to use the chopper (pull the thin ring with ‘grip’ area to detach). Cables are labeled. Make sure before using the chopper that the channels are enabled. 22 +* (% style="color: rgb(0,0,0);" %)move goniotower to X ~~ 17 000 23 + 24 +(% style="color: rgb(0,0,0);" %)Mounting of the TapeDrive is done by the CFEL group. Electronics and control units are combined on a small shelf, that requires only one power and network plug-in. The shelf will be placed left-sided (looking upstream) to the detector tower. The ElveFlow and control laptop as well as several necessary consumables are placed on a cart, which is to be positioned on the right (looking upstream) against the robot platform. The CFEL chiller is placed on the right of the platform and connected to the TapeDrive GASnozzle. 25 + 26 +\\ 27 + 28 +* adjust focus of the tape by moving X in goniometer tower until you see it in the overview camera. Final adjustment should be done when there is flow. Latest value is about 4500 in X and also 5000 in Z (higher soft limit changed from 2976,63 to 6000). (% style="color: rgb(255,0,0);" %)//Better to use the back illumination in the GUI to focus the tape - old instruction, not sure if this is the case. Back illumination is the external light source in the detector tower (the crystallography backlight should be disable for tapedrive).// 29 +* (% style="color: rgb(0,0,0);" %)Check the Minimum Detector Distance; the detector should not collide with the tapedrive while driven to 154 mm but it has to be verified. Also check that all cables and capillaries are taped away when the users start, so that nothing protrudes further than the tapedrive itself. Soft limit can be edited in eh.3.11 Atk panel. 30 +* (% style="color: rgb(0,0,0);" %)Reconfirm the alignment of the beamstop, once everything, including the nozzle, is in place. Modify config.ini for beamstop in- and out-position to both mach in (27 000). This way the beamstop will not be driven out when the hutch is opened, to avoid that the users forget to drive it in when restarting after entering the hutch. 31 + 32 +\\ 33 + 34 +Prepare necessary controls for data collection: 35 + 36 +* ATK panels: 37 +** p11/simplon_filewriter/eh.01 38 +** p11/simplon_detector/eh.01 39 +*** count time = 0.0075 40 +*** trigger (**ints **if working without the chopper, # or triggers is 1, **exts** if with the chopper, # or triggers = number of images). Exts is also the standard trigger in normal crystallography. If GUI is used to take images (e.g. for beamstop alignment) the trigger mode will be forced by that and needs to be reverted manually for the users to continue. 41 +*** numer of images = 100 000 42 +*** number of images in container = 1000 43 +*** mode 16m/4M 44 +*** detector distance = 200 mm (usually) 45 +** p11/detectortower 46 +** p11/motor/eh.09 47 +* remote access to TapeDrive control laptop: 48 +** open terminal, execute command: xfreerdp +clipboard /size:1920x1080 /u:Cfelusr /v:cfeld-pcx22611 49 + password: //written on control laptop 50 +// 51 +* Cameras: 52 +** haspp11ethcam1 → detector tower camera to monitor nozzle 53 +** haspp11ethcam4 → goniometer camera to monitor tape from above 54 +* OnDa (on haspp11user04): 55 +//This starts both GUIs (Frame Viewer & Crystallography GUI) and onda-monitor, the server component. The tool has a bunch of parameters which you can list with ./onda-runner.py —help.//\\ 56 +** 16M mode → cd /home/p11user/CfelSoft/202103_onda 57 + ./onda-runner.py onda-config/onda-config-Eiger16M.toml 58 +** 4M mode → cd /home/p11user/CfelSoft/202103_onda 59 + ./onda-runner.py onda-config/onda-config-Eiger4M.toml\\ 60 + 61 +\\ 62 + 63 +=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.2Samplecharacteristicsandpreparation"/}}**14.2 Sample characteristics and preparation** === 64 + 65 +suspension of microcrystals, **at least** 200 µL with 20% crystal density(more is always better), size range: 2-30 µm, **tip:** bring some mother liquor for washing, filtering, diluting etc. 66 + 16 16 Preparation: 17 17 18 -* filter through 30 µm (green) or 50 µm (yellow)cell filter intoanEppendorf or Falcon (original!) tube69 +* filter through 30 µm cell filter (green) into Eppendorf or Falcon (original!) tube 19 19 20 20 [[image:attach:20211201_095534.jpg||height="250"]] 21 21 73 +\\ 22 22 23 ----- 75 +=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.3ConnectingsampletoElveFlow,sampleexchange"/}}**14.3 Connecting sample to ElveFlow, sample exchange 76 +** === 24 24 25 - = {{id name="14.SerialCrystallography:CFELTapeDrive-14.2ConnectingsampletoElveFlow,sampleexchange"/}}8.2.Connectingsample toElveFlow,sample exchange=78 +After filtration, screw the ElveFlow connector to your Eppendorf or Falcon tube. Make sure that the yellow-ish line goes to the bottom of your tube. You can adjust the length by unscrewing the blue fitting on top and pushing/pulling the yellow-ish line. **Don't forget to tigthen the blue fitting afterwards!** 26 26 27 -After filtration, screw the ElveFlow connector to your Eppendorf or Falcon tube. Make sure that the yellow-ish tube goes all the way to the bottom of your tube. You can adjust the length by unscrewing the blue fitting on top and pushing/pulling the yellow-ish line. **Don't forget to tigthen the blue fitting afterwards!** 28 - 29 29 Be aware to which channel and nozzle line your sample is connected. 30 30 31 31 Red → Channel 1, crystal line (nozzle capillary without marks/with red marks) ... ... @@ -38,47 +38,44 @@ 38 38 39 39 [[image:attach:20211201_095232.jpg||height="250"]][[image:attach:20211201_095205.jpg||height="250"]] 40 40 92 +\\ 41 41 42 ----- 94 +=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.4TapeDriveoperation"/}}**14.4 TapeDrive operation 95 +** === 43 43 44 -= {{id name="14.SerialCrystallography:CFELTapeDrive-14.3TapeDriveoperation"/}}8.3. TapeDrive operation = 45 - 46 -The TapeDrive is controlled through kamzik. To open kamzik, start the server. A terminal will open and shortly after a small window. 47 - 97 +The TapeDrive is controlled through kamzik. To open kamzik, start the server. A terminal will open and shortly after a small window. 48 48 Now start the client. Same thing, a terminal will open, shortly after a small window. 49 49 50 50 Click 'Devices' in the **client session** to open the control window. 51 51 [[image:attach:screen.PNG||height="250"]][[image:attach:server client.PNG||height="250"]] 52 52 53 - == {{id name="14.SerialCrystallography:CFELTapeDrive-Tape"/}}Tape ==103 +**Tape** 54 54 55 -* Click the 'main tape' icon 105 +* Click on the 'main tape' icon 56 56 * Change the velocity by typing anything from **0.3-3.0 mm/s** 57 57 * Common velocity is 1.0-1.5 mm/s 58 58 * kamzik displays the used tape in m and %. At 98% the tape will automatically stop since the rolls need to be exchanged at this point. 59 - 109 +\\ 110 +* [[image:attach:kamzik_tape.PNG||height="400"]] 60 60 61 - [[image:attach:kamzik_tape.PNG||height="400"]]112 +==== {{id name="14.SerialCrystallography:CFELTapeDrive-Samplenozzle"/}}**Sample nozzle** ==== 62 62 63 - 64 -== {{id name="14.SerialCrystallography:CFELTapeDrive-Samplenozzle"/}}Sample nozzle == 65 - 66 -* Click on the 'nozzle' icon. 114 +* Click an the 'nozzle' icon. 67 67 * ((( 68 68 The nozzle position can be adjusted in xyz by clicking on the arrows up and down. (Double arrow = 10 steps). Step size can be varied, 1mm steps are rather big and should be used carefully. 69 69 The absolute position is **not calibrated** and therefore changes after each restart of kamzik. 70 70 71 71 72 -(% style="color: #ff0000" %)**!!! **(% style="color:#000000" %)**During data collection make sure in which direction you are movingthe nozzle, do not move nozzle into beam**(% style="color:#ff0000" %)**!!!**(%%)120 +(% style="color: rgb(255,0,0);" %)**!!! **(% style="color: rgb(255, 0, 0); color: rgb(0, 0, 0)" %)**During data collection make sure in which direction you are moving, do not move nozzle into beam**(% style="color: rgb(255,0,0);" %)** !!!**(%%) 73 73 \\Adjust the nozzle position by eye until it nearly touches the tape and roughly meets the X-ray interaction point. Then, move to the control hutch to use the on-axis microscope for fine adjustment. Move the nozzle tip to the beam position (red X) and write down the absolut nozzle position. From there move the nozzle in +x to your desired distance.Different distances combined with the tape speed result in several delay times for time-resolved experiments. 74 74 75 75 (% class="wrapped" %) 76 76 |=((( 77 - 125 +\\ 78 78 )))|=((( 79 79 direction 80 80 )))|=((( 81 -recommended step size 129 +recommended step size 82 82 for visual adjustment 83 83 )))|=(% colspan="1" %)((( 84 84 recommended step size ... ... @@ -113,33 +113,37 @@ 113 113 be careful with -z, tape could be pushed out of focus 114 114 ))) 115 115 116 - 164 +** 165 +\\** 117 117 ))) 167 +* [[image:attach:kamzik_nozzle.PNG||height="400"]] 118 118 119 - [[image:attach:kamzik_nozzle.PNG||height="400"]]169 +==== {{id name="14.SerialCrystallography:CFELTapeDrive-Temperaturecontrol/Chiller"/}}**Temperature control/Chiller** ==== 120 120 121 - 122 -== {{id name="14.SerialCrystallography:CFELTapeDrive-Temperaturecontrol/Chiller"/}}Temperature control/Chiller == 123 - 124 124 * The chiller circulates fluid through the gas nozzle. 125 125 126 - == {{id name="14.SerialCrystallography:CFELTapeDrive-Gasnozzle"/}}Gas nozzle ==173 +\\ 127 127 175 +==== {{id name="14.SerialCrystallography:CFELTapeDrive-Gasnozzle"/}}**Gas nozzle** ==== 128 128 129 - == {{id name="14.SerialCrystallography:CFELTapeDrive-IRcamera"/}}IR camera ==177 +\\ 130 130 179 +==== {{id name="14.SerialCrystallography:CFELTapeDrive-IRcamera"/}}**IR camera** ==== 131 131 181 +\\ 182 + 132 132 Once the hutch is interlocked, set remote control to the TapeDrive laptop by opening a terminal and executing the following command: 133 133 134 134 xfreerdp +clipboard /size:1920x1080 /u:Cfelusr /v:cfeld-pcx22611 135 - password: //written on control laptop (changes every 6 months)// 186 + password: //written on control laptop (changes every 6 months) 187 +// 136 136 189 +\\ 137 137 191 +\\ 138 138 139 -- ---193 +=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.5Taperollexchange"/}}**14.5 Tape roll exchange** === 140 140 141 -= {{id name="14.SerialCrystallography:CFELTapeDrive-14.4Taperollexchange"/}}8.4. Tape roll exchange = 142 - 143 143 The tape stops automatically at 98% used length, if you need to change the rolls for orther reasons, stop the tape (velocity = 0.0 mm/s). 144 144 145 145 * Remove the (almost) empty feeder roll by pulling it upwards. ... ... @@ -147,7 +147,7 @@ 147 147 * Get a new tape roll (bottom left on the cart). **Polypropylen 15 µm** 148 148 * Cut the first cm of the new tape roll, directly behind the black sticky part. 149 149 * Place new roll on roll holder and use sticky tape to attach the end of the old tape to the beginning of the new roll. 150 -* Open magnetic tape stabilizer on the **left side**. (% style="color:#ff0000" %)//!!!BEAMSTOP!!!//202 +* Open magnetic tape stabilizer on the **left side**. //!!!BEAMSTOP!!!// 151 151 * Start the tape (3mm/s). Once the connetion side has arrived at the collector roll, stop the tape (0mm/s). 152 152 * Again, cut the tape directly behind the connection side. Replace the the old roll with the **empty **one. Old roll can be discarded. 153 153 * Attach new tape to the empty roll by using some sticky tape. ... ... @@ -154,112 +154,46 @@ 154 154 * Close tape stabilizer. 155 155 * Reset tape counter in kamzik by clicking "<Call>" in "Main-Tape". 156 156 157 -**[[image:attach:20211201_094101.jpg||height="250"]][[image:attach:20211201_094111.jpg||height="250"]][[image:attach:tape reset.PNG||height="250"]]** 209 +**[[image:attach:20211201_094101.jpg||height="250"]][[image:attach:20211201_094111.jpg||height="250"]][[image:attach:tape reset.PNG||height="250"]] 210 +** 158 158 212 +\\ 159 159 214 +\\ 160 160 161 - 162 -{{/layout-cell}} 163 -{{/layout-section}} 216 +=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.6Nozzleexchange"/}}**14.6 Nozzle exchange** === 164 164 165 -{{layout-section ac:type="single"}} 166 -{{layout-cell}} 167 ----- 218 +\\ 168 168 169 -= {{id name="14.SerialCrystallography:CFELTapeDrive-14. 5Chopper"/}}8.5.Chopper=220 +=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.7Datacollection"/}}**14.7 Data collection** === 170 170 171 -start chopper gui from terminal: 172 - 173 -(% class="code" %) 174 -((( 175 - cd /gpfs/local/shared/ChopperControl 176 -))) 177 - 178 -(% class="code" %) 179 -((( 180 - python chopperControl.py 181 -\\ 182 -))) 183 -{{/layout-cell}} 184 -{{/layout-section}} 185 - 186 -{{layout-section ac:type="two_equal"}} 187 -{{layout-cell}} 188 - [[image:attach:20211212_233140.jpg||height="250"]] 189 -{{/layout-cell}} 190 - 191 -{{layout-cell}} 192 -**Chopper → no Chopper** 193 - 194 -* decrease frequency by max. 10 Hz steps 195 -** click arrow down 10x, "Set", arrow down 10x, "Set", .... 196 -* at frequency = 10 Hz, click "Stop" 197 -* set "Hole" to <none> (% style="color:#ff0000" %)//Takes some minutes// 198 - 199 -(% style="color:#000000" %)**no Chopper → Chopper** 200 - 201 -* (% style="color:#000000" %)set "Hole" to <Inner hole (largest)> (% style="color:#ff0000" %)//Takes some minutes// 202 -* (% style="color:#000000" %)increase frequency by max. 10 Hz steps 203 -** (% style="color:#000000" %)click arrow up 10x, "Set", arrow up 10x, "Set", ..... 204 -* (% style="color:#000000" %)//usually 130 Hz, results in exposure time of 3.7 ms (technical exposure will always be 7.7 ms, since max. frame rate is 130 Hz// 205 -{{/layout-cell}} 206 -{{/layout-section}} 207 - 208 -{{layout-section ac:type="single"}} 209 -{{layout-cell}} 210 ----- 211 - 212 -= {{id name="14.SerialCrystallography:CFELTapeDrive-14.6Datacollection"/}}8.6. Data collection = 213 - 214 214 Once the hutch is interlocked, set remote control to the TapeDrive laptop by opening a terminal and executing the following command: 215 215 216 -(% class="code" %) 217 -((( 218 - xfreerdp +clipboard /size:1920x1080 /u:cfelusr /v:cfeld-tapetop 219 - password: written on control laptop (changes every 6 months) 220 -))) 224 + xfreerdp +clipboard /size:1920x1080 /u:Cfelusr /v:cfeld-pcx22611 225 + password: //written on control laptop (changes every 6 months)// 221 221 222 - //>>usually the terminal is open, just repeat previous command with arrow up, enter and type in the password// 227 + //>>usually the terminal is open, just repeat previous command with arrow up, enter and type in the password// 223 223 224 - 225 -{{/layout-cell}} 226 -{{/layout-section}} 229 +\\ 227 227 228 -{{layout-section ac:type="two_left_sidebar"}} 229 -{{layout-cell}} 230 230 **Check list:** 231 231 232 -(% style="color:#ff0000" %)//always after entering the hutch!// 233 +* Open BS1 (//CrystalControl)// 234 +* Put collimator in (//CrystalControl)// 235 +* Check beamstop position = 27 000 (//Atk panel p11/motor/eh.3.09)// 236 +* Open fast shutter (//CrystalControl)// 237 +* Check diode voltage ~~ 0.0 (//kamzik Run/Diode voltage)// 238 +* Close fast shutter (//CrystalControl)// 233 233 234 - (% style="color:#000000" %)Click "Run" icon in kamzik.240 +\\ 235 235 236 -* Put detector distance 200 in //prepare_for_measurement ( )// 237 -* Click "<Call>" next to //prepare_for_measurement// 238 -This will: 239 -** drive the collimator in //IN// position 240 -** drive detector to 200 mm 242 +**Start run in kamzik 243 +** 241 241 242 - *Open beam shutterBS1in//CrystalControl//or// P11 XRayFeed //245 +Click "Start" icon in kamzik. 243 243 244 - //**Setrun parameters andgo 🏃💥**//247 +[[image:attach:kamzik_run-tile.jpg||height="400"]] 245 245 246 -1. Set your desired No. of frames 247 -1. Enter the protein ID of your crystal sample 248 -1. Match exposure time with chopper setting or set desired exposure time 249 -1. Check trigger setting and match to chopper setting 250 -no chopper → external triffer //off// 251 - chopper → external trigger// on// 252 -1. To start the run, click "<Call>" next to //start_run (exposure )// 253 -{{/layout-cell}} 254 - 255 -{{layout-cell}} 256 -[[image:attach:Kamzik_run(2).PNG]] 257 -{{/layout-cell}} 258 -{{/layout-section}} 259 - 260 -{{layout-section ac:type="single"}} 261 -{{layout-cell}} 262 -(% class="relative-table wrapped" style="width:55.9569%" %) 263 263 |=((( 264 264 Parameter 265 265 )))|=((( ... ... @@ -270,7 +270,7 @@ 270 270 |((( 271 271 Images number 272 272 )))|((( 273 -number of frames you want to collect 259 +Set number of frames you want to collect 274 274 )))|(% colspan="1" %)((( 275 275 usually 100k - 200k, but adjust according to hitrate 276 276 ... ... @@ -281,9 +281,12 @@ 281 281 )))|((( 282 282 exposure time of Eiger 283 283 284 - 270 +\\ 285 285 )))|(% colspan="1" %)((( 286 -with chopper → opening time displayed in chopper GUI 272 +chopper at 133 Hz → 3.7 ms 273 + 274 +chopper at 66 Hz → 7.7 ms 275 + 287 287 no chopper → 7.7 ms 288 288 289 289 ---- ... ... @@ -293,7 +293,7 @@ 293 293 )))|((( 294 294 changes automatically 295 295 )))|(% colspan="1" %)((( 296 - 285 +\\ 297 297 ))) 298 298 |(% colspan="1" %)((( 299 299 Detector distance ... ... @@ -300,109 +300,66 @@ 300 300 )))|(% colspan="1" %)((( 301 301 current detector postion readout 302 302 )))|(% colspan="1" %)((( 303 - 292 +\\ 304 304 ))) 305 305 |(% colspan="1" %)((( 306 - proteinID295 +move_detector (distance) 307 307 )))|(% colspan="1" %)((( 308 - proteinID ofcrystal sample(see AMARCORD)297 +Set detector distance 309 309 )))|(% colspan="1" %)((( 310 - 299 +200.0 mm (% style="color: rgb(255,0,0);" %)confirm with //enter//, click "<Call>" 311 311 ))) 301 +|(% colspan="1" %)((( 302 +Diode voltage 303 +)))|(% colspan="1" %)((( 304 +read out of diode 305 +)))|(% colspan="1" %)((( 306 +**~~ 0 !!! higher values indicate missaligned beam stop!!!** 307 +))) 312 312 313 313 ---- 314 -{{/layout-cell}} 315 -{{/layout-section}} 316 316 317 -{{layout-section ac:type="two_equal"}} 318 -{{layout-cell}} 319 -**After data collection/Before entering the exp. hutch:** 311 +(% class="task-list" %) 312 +((( 313 +{{task reference="/Tasks/Task_6" status="InProgress"}} 314 +Set your desired No. of frames 315 +{{/task}} 320 320 321 -1. Go to "Safety" in kamzik. 322 -1. Click "<Call>" next to //prepare_to_open_hutch. //This will automatically: 323 -11. Drive the collimator out 324 -11. Drive the detector back to 1500 mm 325 -1. Close beam shutter BS1 and break door interlock in //P11 XRayFeed //(monitor top left). 317 +{{task reference="/Tasks/Task_7" status="InProgress"}} 318 +Match exposure time with chopper setting 319 +{{/task}} 326 326 327 -[[image:attach:Screenshot from 2022-04-04 19-36-29.png]] 328 -{{/layout-cell}} 321 +{{task reference="/Tasks/Task_8" status="InProgress"}} 322 +Check trigger setting and match to chopper setting 323 +{{/task}} 329 329 330 -{{layout-cell}} 331 - 325 +{{task reference="/Tasks/Task_9" status="InProgress"}} 326 +Set detector distance to 200.0 mm, confirm with //enter// and click "<Call>" button next to it. 327 +{{/task}} 332 332 329 +{{task reference="/Tasks/Task_10" status="InProgress"}} 330 +To start the run, click "<Call>" next to //exposure time// 331 +{{/task}} 332 +))) 333 333 334 - 335 - 336 - 337 -[[image:attach:safety_kamzik.PNG]] 338 -{{/layout-cell}} 339 -{{/layout-section}} 340 - 341 -{{layout-section ac:type="single"}} 342 -{{layout-cell}} 343 343 ---- 344 344 345 - = {{id name="14.SerialCrystallography:CFELTapeDrive-14.7Troubleshooting"/}}8.7. Troubleshooting =336 +\\ 346 346 347 -* ((( 348 -== {{id name="14.SerialCrystallography:CFELTapeDrive-Tapestopped"/}}Tape stopped == 338 +\\ 349 349 350 -* Tape roll empty? 351 -* motor connected (icon green)? 352 -))) 340 +=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.8Troubleshooting"/}}14.8 Troubleshooting === 353 353 354 354 * ((( 355 -== {{id name="14.SerialCrystallography:CFELTapeDrive-Nozzlemotorsarenotresponding"/}}Nozzle motors are not responding == 356 - 357 -* displayed in green=connected? 358 -* nozzle holder colliding somewhere? 359 -* motor limits reached? → position displayed in red 343 +==== {{id name="14.SerialCrystallography:CFELTapeDrive-Tapestopped"/}}Tape stopped ==== 360 360 ))) 361 - 362 362 * ((( 363 -== {{id name="14.SerialCrystallography:CFELTapeDrive-Sampleflowisnotrespondingtohigherpressure"/}}Sample flow is not responding to higher pressure == 364 - 365 -* channel turned on? 366 -* Sample empty? 367 -* Nozzle or lines clogged? → flush with water, change nozzle 346 +==== {{id name="14.SerialCrystallography:CFELTapeDrive-Nozzlemotorsarenotresponding"/}}Nozzle motors are not responding ==== 368 368 ))) 369 - 370 370 * ((( 371 -== {{id name="14.SerialCrystallography:CFELTapeDrive-Simplonfilewriter/eigerstreamissues"/}}Simplon filewriter/eiger stream issues == 372 - 373 -* First, restart kamzik (server+client) and see if this solves the issue 374 -* If not, restart the Simplon server (in Astor → haspp11exp03, right click on Simplon/EH.1 and restart) 375 -* ((( 376 -If nothing works, kill the Simplon process and then start the server again:* 377 - 378 -((( 379 -(% class="code" %) 380 -((( 381 -ssh haspp11exp03 349 +==== {{id name="14.SerialCrystallography:CFELTapeDrive-Sampleflowisnotrespondingtohigherpressure"/}}Sample flow is not responding to higher pressure ==== 382 382 ))) 383 -))) 384 384 385 -* ((( 386 -(% class="code" %) 387 -((( 388 -ps -ef | grep Simplon 389 -))) 390 -))) 391 -* ((( 392 -(% class="code" %) 393 -((( 394 -kill -9 simplon_process_id 395 -))) 396 -))) 397 -))) 398 -* After the Simplon server is back up, close all kamzik windows and restart (first server, then client) 399 -))) 400 -{{/layout-cell}} 401 -{{/layout-section}} 352 +\\ 402 402 403 -{{layout-section ac:type="single"}} 404 -{{layout-cell}} 405 - 406 -{{/layout-cell}} 407 -{{/layout-section}} 408 -{{/layout}} 354 +\\
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