Changes for page The FLASH HDF5 structure

Last modified by sndueste on 2025/02/06 10:55
From version 2.1
edited by sendels
on 2019/05/15 13:01
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To version 7.1
edited by sndueste
on 2019/09/16 11:40
Change comment: There is no comment for this version

Summary

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Page properties
Title
... ... @@ -1,1 +1,1 @@
1 -Information about the FLASH HDF5 structure
1 +The FLASH HDF5 structure
Author
... ... @@ -1,1 +1,1 @@
1 -XWiki.sendels
1 +XWiki.sndueste
Content
... ... @@ -2,22 +2,22 @@
2 2  
3 3  \\
4 4  
5 -* General information about HDF5
6 -* FLASH HDF5 structure
7 -* Most popular FLASH parameters and their names in HDF5
8 -** FLASH1
9 -*** Beamline info (FLASH1)
10 -*** Photon Diagnostics: SASE / Spectrometer (FLASH1)
11 -*** Electron Beam properties (FLASH1)
12 -*** Timing information, rep rate etc.(FLASH1)
13 -*** Pump Probe Laser (FLASH1)
14 -*** User Data (FLASH1)
15 -** FLASH2
16 -** HDF5 structure revisions
17 -* Example code showing how to access HDF5 files
18 -** Samples how to read HDF5 with Matlab
19 -** How to read HDF5 with Python via FLASHH5
20 -* HDF5 and DOOCS
5 +* [[General information about HDF5>>doc:||anchor="General information about HDF5"]]
6 +* [[FLASH HDF5 structure>>doc:||anchor="FLASH HDF5 structure"]]
7 +* [[Most popular FLASH parameters and their names in HDF5>>doc:||anchor="Most popular FLASH parameters and their names in HDF5"]]
8 +** [[FLASH1>>doc:||anchor="FLASH1"]]
9 +*** [[Beamline info (FLASH1)>>doc:||anchor="Beamline info (FLASH1)"]]
10 +*** [[Photon Diagnostics SASE / Spectrometer (FLASH1)>>doc:||anchor="Photon Diagnostics SASE / Spectrometer (FLASH1)"]]
11 +*** [[Electron Beam properties (FLASH1)>>doc:||anchor="Electron Beam properties (FLASH1)"]]
12 +*** [[Timing information, rep rate etc.(FLASH1)>>doc:||anchor="Timing information, rep rate etc.(FLASH1)"]]
13 +*** [[Pump Probe Laser (FLASH1)>>doc:||anchor="Pump Probe Laser (FLASH1)"]]
14 +*** [[User Data (FLASH1)>>doc:||anchor="User Data (FLASH1)"]]
15 +** [[FLASH2>>doc:||anchor="FLASH2"]]
16 +** [[HDF5 structure revisions>>doc:||anchor="HDF5 structure revisions"]]
17 +* [[Example code showing how to access HDF5 files>>doc:||anchor="Example code showing how to access HDF5 files"]]
18 +** [[Samples how to read HDF5 with Matlab>>doc:||anchor="Samples how to read HDF5 with Matlab"]]
19 +** [[How to read HDF5 with Python via FLASHH5>>doc:||anchor="How to read HDF5 with Python via FLASHH5"]]
20 +* [[HDF5 and DOOCS>>doc:||anchor="HDF5 and DOOCS"]]
21 21  
22 22  \\
23 23  
... ... @@ -33,7 +33,7 @@
33 33  {{code language="none"}}> module load xray{{/code}}
34 34  {{code language="none"}}> hdfview{{/code}}
35 35  
36 -\\
36 +[[Contents>>doc:||anchor="Contents"]]
37 37  
38 38  == FLASH HDF5 structure ==
39 39  
... ... @@ -44,21 +44,21 @@
44 44  * Beamlines
45 45  * Experiment
46 46  * Timing
47 -[[image:url:http://hasfweb.desy.de/pub/Setup/HDF5main/HDF5_structure.jpg||alt="HDF5_structure.jpg" width="700" height="500"]]
47 +[[~[~[image:url:http://hasfweb.desy.de/pub/Setup/HDF5main/HDF5_structure.jpg~|~|alt="HDF5_structure.jpg" width="700" height="500"~]~]>>attach:HDF5_structure.jpg]]
48 48  
49 49  A detailled description of (most) channels can be found in the lower part of the hdf5 viewer:
50 -[[image:url:http://hasfweb.desy.de/pub/Setup/HDF5main/HDF5_structure_desc.jpg||alt="HDF5_structure_desc.jpg" width="341" height="413"]]
50 +[[~[~[image:url:http://hasfweb.desy.de/pub/Setup/HDF5main/HDF5_structure_desc.jpg~|~|alt="HDF5_structure_desc.jpg" width="341" height="413"~]~]>>attach:HDF5_structure_desc.jpg]]
51 51  
52 -\\
52 +[[Contents>>doc:||anchor="Contents"]]
53 53  
54 54  \\
55 55  
56 56  == Most popular FLASH parameters and their names in HDF5 ==
57 57  
58 -The compleate list for the relation between DOOCS names and HDF5 names for the recordable parameters can be found in [[DESY's Repository~[~[image:url:http://hasfweb.desy.de/pub/TWiki/TWikiDocGraphics/external-link.gif~|~|width="13" height="12"~]~]>>url:https://stash.desy.de/projects/CS/repos/pah/browse/src/camp/data/channel2HdfName.dat||shape="rect"]].
58 +The complete list for the relation between DOOCS names and HDF5 names for the recordable parameters can be found in [[DESY's Repository~[~[image:url:http://hasfweb.desy.de/pub/TWiki/TWikiDocGraphics/external-link.gif~|~|width="13" height="12"~]~]>>url:https://stash.desy.de/projects/CS/repos/pah/browse/src/camp/data/channel2HdfName.dat||shape="rect"]].
59 59  The most common and often used ones are summarized below:
60 60  
61 -Note, the HDF group and dataset names apply to our HDF tree version since vers. 0.3.0.
61 +Note, the HDF group and data set names apply to our HDF tree version since vers. 0.3.0.
62 62  
63 63  \\
64 64  
... ... @@ -96,7 +96,7 @@
96 96  //always saved (PBD)//
97 97  DOOCS prop : {{code language="none"}}TTF2.FEL/BLFILTERS1/FILTER1/FW.MOTOR.POS{{/code}}
98 98  DAQ channel: {{code language="none"}}TTF2.FEL/BLFILTERS1/FILTER1/FW.MOTOR.POS{{/code}}
99 -desc: Position of the BL filterwheel 1 - to correlate with the filter material please look [[here>>doc:FLASHUSER.Filter history (BL filterwheel 12)]]
99 +desc: Position of the BL filter wheel 1 - to correlate with the filter material please look [[here>>doc:FLASH.Filter history (BL filterwheel 12)]]
100 100  units: degree
101 101  \\
102 102  
... ... @@ -104,7 +104,7 @@
104 104  //always saved (PBD)//
105 105  DOOCS prop : {{code language="none"}}TTF2.FEL/BLFILTERS2/FILTER2/FW.MOTOR.POS{{/code}}
106 106  DAQ channel: {{code language="none"}}TTF2.FEL/BLFILTERS2/FILTER2/FW.MOTOR.POS{{/code}}
107 -desc: Position of the BL filterwheel 2 - to correlate with the filter material please look [[here>>doc:FLASHUSER.Filter history (BL filterwheel 12)]]
107 +desc: Position of the BL filter wheel 2 - to correlate with the filter material please look [[here>>doc:FLASH.Filter history (BL filterwheel 12)]]
108 108  units: degree
109 109  \\
110 110  
... ... @@ -112,7 +112,7 @@
112 112  //always saved (PBD)//
113 113  DOOCS prop : = TTF2.FEL/BDAF1/BDA.F1/FW.MOTOR.POS=
114 114  DAQ channel: {{code language="none"}}TTF2.FEL/BDAF1/BDA.F1/FW.MOTOR.POS{{/code}}
115 -desc: Position of the PG filterwheel 1
115 +desc: Position of the PG filter wheel 1
116 116  units: degree
117 117  \\
118 118  
... ... @@ -120,7 +120,7 @@
120 120  //always saved (PBD)//
121 121  DOOCS prop : {{code language="none"}}TTF2.FEL/BDAF2/BDA.F2/FW.MOTOR.POS{{/code}}
122 122  DAQ channel: {{code language="none"}}TTF2.FEL/BDAF2/BDA.F2/FW.MOTOR.POS{{/code}}
123 -desc: Position of the PG filterwheel 2
123 +desc: Position of the PG filter wheel 2
124 124  units: degree
125 125  \\
126 126  
... ... @@ -128,13 +128,13 @@
128 128  //always saved (PBD)//
129 129  DOOCS prop : {{code language="none"}}TTF2.FEL/PGFILTERS/PGFILTERS/FW.MOTOR.POS{{/code}}
130 130  DAQ channel: {{code language="none"}}TTF2.FEL/PGFILTERS/PGFILTERS/FW.MOTOR.POS{{/code}}
131 -desc: Position of the PG filterwheel 3
131 +desc: Position of the PG filter wheel 3
132 132  units: degree
133 133  \\
134 134  
135 -\\
135 +[[Contents>>doc:||anchor="Contents"]]
136 136  
137 -==== Photon Diagnostics: SASE / Spectrometer (FLASH1) ====
137 +==== Photon Diagnostics SASE / Spectrometer (FLASH1) ====
138 138  
139 139  {{code language="none"}}/FL1/Photon Diagnostic/GMD/Average energy/energy tunnel{{/code}}
140 140  //always saved (PBD)//
... ... @@ -148,7 +148,7 @@
148 148  DOOCS prop : {{code language="none"}}TTF2.DAQ/PHFLUX/OUT34/VAL{{/code}}
149 149  DAQ channel: {{code language="none"}}PBD.PHFLUX/TUNNEL.ENERGYPULSE.USER{{/code}}
150 150  desc :Energy per pulse Tunnel (from e-) - the values are set to "0" if there was no SASE beam in the FEL
151 -units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision) [[see here for help>>doc:FLASHUSER.jddd-linked help pages.Calibrating the pulse resolved (electron) data from GMD.WebHome]]
151 +units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision) [[see here for help>>doc:FLASH.Calibrating the pulse resolved (electron) data from GMD]]
152 152  
153 153  {{code language="none"}}/FL1/Photon Diagnostic/GMD/Pulse resolved energy/energy tunnel (raw){{/code}}
154 154  //always saved (PBD)//
... ... @@ -155,7 +155,7 @@
155 155  DOOCS prop : {{code language="none"}}TTF2.DAQ/PHFLUX/OUT14/VAL{{/code}}
156 156  DAQ channel: {{code language="none"}}PBD.PHFLUX/TUNNEL.ENERGYPULSE.FF{{/code}}
157 157  desc :Energy per pulse Tunnel (from e-) - uncorrected values. There are also values saved if there was no beam ... just background noise
158 -units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision) [[see here for help>>doc:FLASHUSER.jddd-linked help pages.Calibrating the pulse resolved (electron) data from GMD.WebHome]]
158 +units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision) [[see here for help>>doc:FLASH.Calibrating the pulse resolved (electron) data from GMD]]
159 159  
160 160  {{code language="none"}}/FL1/Photon Diagnostic/GMD/Average energy/energy BDA{{/code}}
161 161  //always saved (PBD)//
... ... @@ -169,7 +169,7 @@
169 169  DOOCS prop : {{code language="none"}}TTF2.DAQ/PHFLUX/OUT35/VAL{{/code}}
170 170  DAQ channel: {{code language="none"}}PBD.PHFLUX/BDA.ENERGYPULSE.USER{{/code}}
171 171  desc :Energy per pulse BDA (from e-) - the values are set to "0" if there was no SASE beam in the FEL
172 -units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision) [[see here for help>>doc:FLASHUSER.jddd-linked help pages.Calibrating the pulse resolved (electron) data from GMD.WebHome]]
172 +units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision) [[see here for help>>doc:FLASH.Calibrating the pulse resolved (electron) data from GMD]]
173 173  
174 174  {{code language="none"}}/FL1/Photon Diagnostic/GMD/Pulse resolved energy/energy BDA (raw){{/code}}
175 175  //always saved (PBD)//
... ... @@ -176,13 +176,13 @@
176 176  DOOCS prop : {{code language="none"}}TTF2.DAQ/PHFLUX/OUT15/VAL{{/code}}
177 177  DAQ channel: {{code language="none"}}PBD.PHFLUX/BDA.ENERGYPULSE.FF{{/code}}
178 178  desc :Energy per pulse BDA (from e-) - uncorrected values. There are also values saved if there was no beam ... just background noise
179 -units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision) [[see here for help>>doc:FLASHUSER.jddd-linked help pages.Calibrating the pulse resolved (electron) data from GMD.WebHome]]
179 +units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision) [[see here for help>>doc:FLASH.Calibrating the pulse resolved (electron) data from GMD]]
180 180  
181 181  {{code language="none"}}/FL1/Photon Diagnostic/GMD/Beam position/position BDA horizontal{{/code}}
182 182  //always saved (PBD)//
183 183  DOOCS prop : {{code language="none"}}FLASH.FEL/XGM.POSMON/FL1.BDA/IX.POS{{/code}}
184 184  DAQ channel: {{code language="none"}}FLASH.FEL/XGM.POSMON/FL1.BDA/IX.POS{{/code}}
185 -desc :Beam position of the photon Beam determined by the [[GMD>>doc:FLASHUSER.Gas Monitor Detector]] (BDA, x=horizontal)
185 +desc :Beam position of the photon Beam determined by the [[GMD>>doc:FLASH.Gas Monitor Detector]] (BDA, x=horizontal)
186 186  units : mm
187 187  
188 188  {{code language="none"}}/FL1/Photon Diagnostic/GMD/Beam position/position BDA vertical{{/code}}
... ... @@ -189,7 +189,7 @@
189 189  //always saved (PBD)//
190 190  DOOCS prop : {{code language="none"}}FLASH.FEL/XGM.POSMON/FL1.BDA/IY.POS{{/code}}
191 191  DAQ channel: {{code language="none"}}FLASH.FEL/XGM.POSMON/FL1.BDA/IY.POS{{/code}}
192 -desc :Beam position of the photon Beam determined by the [[GMD>>doc:FLASHUSER.Gas Monitor Detector]] (BDA, y=vertical)
192 +desc :Beam position of the photon Beam determined by the [[GMD>>doc:FLASH.Gas Monitor Detector]] (BDA, y=vertical)
193 193  units : mm
194 194  
195 195  {{code language="none"}}/FL1/Photon Diagnostic/GMD/Beam position/position tunnel horizontal{{/code}}
... ... @@ -196,7 +196,7 @@
196 196  //always saved (PBD)//
197 197  DOOCS prop : {{code language="none"}}FLASH.FEL/XGM.POSMON/FL1.TUNNEL/IX.POS{{/code}}
198 198  DAQ channel: {{code language="none"}}FLASH.FEL/XGM.POSMON/FL1.TUNNEL/IX.POS{{/code}}
199 -desc :Beam position of the photon Beam determined by the [[GMD>>doc:FLASHUSER.Gas Monitor Detector]] (TUNNEL, x=horizontal)
199 +desc :Beam position of the photon Beam determined by the [[GMD>>doc:FLASH.Gas Monitor Detector]] (TUNNEL, x=horizontal)
200 200  units : mm
201 201  
202 202  {{code language="none"}}/FL1/Photon Diagnostic/GMD/Beam position/position tunnel vertical{{/code}}
... ... @@ -203,7 +203,7 @@
203 203  //always saved (PBD)//
204 204  DOOCS prop : {{code language="none"}}FLASH.FEL/XGM.POSMON/FL1.TUNNEL/IY.POS{{/code}}
205 205  DAQ channel: {{code language="none"}}FLASH.FEL/XGM.POSMON/FL1.TUNNEL/IY.POS{{/code}}
206 -desc :Beam position of the photon Beam determined by the [[GMD>>doc:FLASHUSER.Gas Monitor Detector]] (TUNNEL, y=vertical)
206 +desc :Beam position of the photon Beam determined by the [[GMD>>doc:FLASH.Gas Monitor Detector]] (TUNNEL, y=vertical)
207 207  units : mm
208 208  
209 209  {{code language="none"}}/FL1/Photon Diagnostic/Wavelength/Tunnelspectrometer/wavelength{{/code}}
... ... @@ -269,12 +269,10 @@
269 269  desc : increment value (in nm) for each pixel for the wavelength axis of the XUV Spectrum measured with the "PG spectrometer"
270 270  units : nm
271 271  
272 -\\
272 +[[Contents>>doc:||anchor="Contents"]]
273 273  
274 274  ==== Electron Beam properties (FLASH1) ====
275 275  
276 -\\
277 -
278 278  ===== bunch charge =====
279 279  
280 280  {{code language="none"}}/FL1/Electron Diagnostic/Bunch charge/after undulator{{/code}}
... ... @@ -283,12 +283,10 @@
283 283  DAQ channel: {{code language="none"}}FLASH.DIAG/TOROID/12EXP{{/code}}
284 284  desc: electron bunch charge (FLASH1)
285 285  units: nC
286 -\\
287 287  
288 -\\
285 +=====
286 +arrival time =====
289 289  
290 -===== arrival time =====
291 -
292 292  {{code language="none"}}/FL1/Electron Diagnostic/BAM/4DBC3/electron bunch arrival time (low charge){{/code}}
293 293  //always saved (PBD)//
294 294  DOOCS prop : {{code language="none"}}FLASH.SDIAG/BAM/4DBC3/LOW_CHARGE_ARRIVAL_TIME{{/code}}
... ... @@ -295,10 +295,8 @@
295 295  DAQ channel: {{code language="none"}}FLASH.SDIAG/BAM.DAQ/4DBC3.LOW_CHARGE_ARRIVAL_TIME{{/code}}
296 296  desc: Electron bunch arrival time measured with the BAM (more or less) before the undulator (pulse resolved data)
297 297  units: ps (bigger numbers indicate later arrivaltime of the electrons)
298 -note: besides the arivaltime from FLASH1 there is also the FLASH2/3 electron arrival time saved. [[LINK to detailled infos from MSK (may only work inside DESY network~[~[image:url:http://hasfweb.desy.de/pub/TWiki/TWikiDocGraphics/external-link.gif~|~|width="13" height="12"~]~]>>url:http://mskwiki/index.php?title=BAM-DAQ_Channels||shape="rect"]]
294 +note: besides the arivaltime from FLASH1 there is also the FLASH2/3 electron arrival time saved. [[LINK to detailled infos from MSK (may only work inside DESY network~[~[image:url:http://hasfweb.desy.de/pub/TWiki/TWikiDocGraphics/external-link.gif~|~|width="13" height="12"~]~]>>url:http://www.desy.de/~~mbock/pages/BAM_daq_channel_descriptions.html||shape="rect"]] and to a recent  [[talk about the working principle of the BAM>>url:https://confluence.desy.de/download/attachments/134216957/BAM-basics_and_outlook-2018_DESY-template_16-9Format.pdf?version=1&modificationDate=1565162143328&api=v2||shape="rect"]]
299 299  
300 -\\
301 -
302 302  ===== electron beam profile =====
303 303  
304 304  {{code language="none"}}/FL1/Electron Diagnostic/Electron bunch profile/TDS profile{{/code}}
... ... @@ -323,10 +323,7 @@
323 323  DAQ channel: {{code language="none"}}PBD.BEAM.PROF.ML/PROFWIDTHCCTED{{/code}}
324 324  desc: rms pulse width of the measures TDS electron bunch profile
325 325  units: fs
326 -\\
327 327  
328 -\\
329 -
330 330  ===== electron bunch energy =====
331 331  
332 332  {{code language="none"}}/FL1/Electron Diagnostic/Electron energy/average electron energy{{/code}}
... ... @@ -342,8 +342,7 @@
342 342  DOOCS prop : {{code language="none"}}TTF2.DAQ/ENERGY.DOGLEG/E_SPECT/VAL.TD{{/code}}
343 343  DAQ channel: {{code language="none"}}PBD.ENERGY.DOGLEG/E_SPECT{{/code}}
344 344  desc: electron bunch energy bunch resolved
345 -units: (% class="twikiNewLink" %)MeV(%%)
346 -\\
336 +units: (% class="twikiNewLink" %)MeV
347 347  
348 348  \\
349 349  
... ... @@ -355,14 +355,12 @@
355 355  units: nm
356 356  \\
357 357  
358 -\\
348 +[[Contents>>doc:||anchor="Contents"]]
359 359  
360 360  \\
361 361  
362 -==== Timing information, rep rate etc.(FLASH1) ====
352 +==== Timing information, rep rate etc.  (FLASH1) ====
363 363  
364 -\\
365 -
366 366  ===== bunch repetition rate =====
367 367  
368 368  {{code language="none"}}/FL1/Timing/repetition rate{{/code}}
... ... @@ -373,8 +373,6 @@
373 373  units: kHz
374 374  \\
375 375  
376 -\\
377 -
378 378  ===== set number of pulses =====
379 379  
380 380  {{code language="none"}}/FL1/Timing/set number of bunches{{/code}}
... ... @@ -383,10 +383,7 @@
383 383  DAQ channel: {{code language="none"}}TTF2.UTIL/LASER.CONTROL/GUN/PULSE_NUM{{/code}}
384 384  desc: Number of pulses set at the gun (FLASH1)
385 385  units:
386 -\\
387 387  
388 -\\
389 -
390 390  ===== actual number of pulses =====
391 391  
392 392  {{code language="none"}}/FL1/Timing/actual number of bunches{{/code}}
... ... @@ -397,8 +397,6 @@
397 397  units:
398 398  \\
399 399  
400 -\\
401 -
402 402  ===== actual pulse pattern recorded after the undulator =====
403 403  
404 404  {{code language="none"}}/FL1/Timing/Bunch pattern/pattern after undulator{{/code}}
... ... @@ -409,8 +409,6 @@
409 409  units:
410 410  \\
411 411  
412 -\\
413 -
414 414  ===== Train ID =====
415 415  
416 416  {{code language="none"}}/Timing/train ID{{/code}}
... ... @@ -421,8 +421,6 @@
421 421  units:
422 422  \\
423 423  
424 -\\
425 -
426 426  ===== Train time =====
427 427  
428 428  {{code language="none"}}/Timing/train time{{/code}}
... ... @@ -436,18 +436,22 @@
436 436  third column: Train ID of FLASH
437 437  \\
438 438  
439 -\\
416 +[[Contents>>doc:||anchor="Contents"]]
440 440  
441 441  \\
442 442  
443 443  ==== Pump Probe Laser (FLASH1) ====
444 444  
445 -{{code language="none"}}/FL1/Experiment/Pump probe laser/laser attenuation{{/code}} //always saved (PBD)//
422 +{{code language="none"}}/FL1/Experiment/Pump probe laser/laser attenuation{{/code}}
423 +
424 +//always saved (PBD)//
446 446  DOOCS prop : {{code language="none"}}TTF2.FEL/PPDELAYCAL/PPDELAYCAL/ROT2.CURRENT{{/code}}
447 447  DAQ channel: {{code language="none"}}TTF2.FEL/PPDELAYCAL/PPDELAYCAL/ROT2.CURRENT{{/code}}
448 448  desc: attenuation of the PPLaser (rotation of a waveplate)
449 449  units : 0 no transmission , 1: full transmission
450 450  
430 +\\
431 +
451 451  {{code language="none"}}/FL1/Experiment/Pump probe laser/laser delay{{/code}}
452 452  //always saved (PBD)//
453 453  DOOCS prop : {{code language="none"}}TTF2.FEL/PPDELAYCAL/PPDELAYCAL/DLY1.CURRENT{{/code}}
... ... @@ -455,6 +455,8 @@
455 455  desc: delay of the Pump probe laser - measured by the read back position of the motor. only read out every secound ... better use the encoder
456 456  units : ps ( pos delay means IR comes later)
457 457  
439 +\\
440 +
458 458  {{code language="none"}}/FL1/Experiment/Pump probe laser/delay line IK220.0/ENC.DELAY{{/code}}
459 459  //always saved (PBD)//
460 460  DOOCS prop : {{code language="none"}}TTF2.FEL/DELLINE.ENC/IK220.0/ENC.DELAY{{/code}}
... ... @@ -462,6 +462,8 @@
462 462  subsystem: {{code language="none"}}DELLINE.ENC{{/code}} desc : delay of the Pump probe laser - measured by an encoder. The position is read out with 10Hz train synchronized and should be used to determine the actual laser delay (the motor position is only read out about every second
463 463  units : ps ( pos delay means IR comes later)
464 464  
448 +\\
449 +
465 465  {{code language="none"}}/FL1/Experiment/Pump probe laser/Synchronization/timing jitter RMS GECCO{{/code}}
466 466  //always saved (PBD)//
467 467  DOOCS prop : {{code language="none"}}FLASH.SYNC/F1PPL.LASER_LOCK/28C.F1PPL1.CONTROLLER/ADV_CTRL_MANAGER.0.PID_INPUT_JITTER.2.RD{{/code}}
... ... @@ -478,14 +478,12 @@
478 478  
479 479  \\
480 480  
481 -\\
466 +[[Contents>>doc:||anchor="Contents"]]
482 482  
483 483  \\
484 484  
485 485  ==== User Data (FLASH1) ====
486 486  
487 -\\
488 -
489 489  ===== GHz ADCs =====
490 490  
491 491  ADC traces of the (SPDevices 412) GHZ ADCs available for the users . More information about the ADCs can be found [[here>>doc:FLASHUSER.Data Acquisition and controls.Controls (DOOCS, jDDD,\.\.\.).MTCA ADCs.WebHome]]
... ... @@ -521,7 +521,7 @@
521 521  
522 522  ===== MHz ADCs =====
523 523  
524 -similar to the GHz ADCs the MHz ASDsa re saved with HDF5 names like:
507 +similar to the GHz ADCs the MHz ADCs are saved with HDF5 names like:
525 525  {{code language="none"}}/FL1/Experiment/BL1/SIS8300 100MHz ADC/CH2/TD{{/code}}
526 526  DOOCS prop : FLASH.FEL/ADC.SIS.BL1/EXP1.CH02/CH00.TD
527 527  DAQ channel: : FLASH.FEL/ADC.SIS.BL1/EXP1.CH02
... ... @@ -528,17 +528,54 @@
528 528  
529 529  \\
530 530  
531 -\\
514 +[[Contents>>doc:||anchor="Contents"]]
532 532  
533 533  === FLASH2 ===
534 534  
518 +There is analog to FLASH1 a permanently running "PhotonDagnostic DAQ FLASH2" (PBD2) and 2 User DAQs
519 +
520 +==== Beamline info (FLASH2) ====
521 +
522 +(% style="color: rgb(255,153,0);" %)(not yet available){{code language="none"}}/FL2/Beamlines/Attenuator/pressure  {{/code}}(%%)
523 +//always saved (PBD2)//
524 +DOOCS prop : {{code language="none"}}FLASH.FEL/ATT.GAS_DOSING/FL2.HALL/PRESSURE{{/code}}
525 +DAQ channel:  {{code language="none"}}FLASH.FEL/ATT.GAS_DOSING/FL2.HALL/PRESSURE{{/code}}
526 +desc: set pressure in the gas attenuator
527 +units: mbar
535 535  \\
536 536  
530 +{{code language="none"}}/FL2/Beamlines/FL20/Shutter/open{{/code}}
531 +//always saved (PBD2)//
532 +DOOCS prop : {{code language="none"}}FLASH.FEL/ADC.SIS.FL2FS/FL20.SHUTTER/CH00.TD{{/code}}
533 +DAQ channel: {{code language="none"}}FLASH.FEL/ADC.SIS.FL2FS/FL20.SHUTTER{{/code}}
534 +desc: BL Beamline Fast shutter state: 1 is open, 0 is closed ( for technical reasons there are 100 vales of this state saved ...)
535 +units: none
536 +
537 +
538 +{{code language="none"}}/FL2/Beamlines/Filter wheel/position wheel 1{{/code}}
539 +//always saved (PBD)//
540 +DOOCS prop : {{code language="none"}}FLASH.FEL/FL20H.PH.MOTOR/MOTOR1.MOT3/FPOS{{/code}}
541 +DAQ channel: FLASH.FEL/FL20H.PH.MOTOR/MOTOR1.MOT3/FPOS
542 +desc: Position of the BL filter wheel 1 - to correlate with the filter material please look [[here>>doc:FLASH.Filter history (BL filterwheel 12)]]
543 +units: degree
544 +\\
545 +
546 +
547 +//always saved (PBD)//
548 +\\\\[[here>>doc:FLASH.Filter history (BL filterwheel 12)]]
549 +{{code language="none"}}/FL2/Beamlines/Filter wheel/position wheel 2 DOOCS prop : FLASH.FEL/FL20H.PH.MOTOR/MOTOR2.MOT3/FPOS DAQ channel: FLASH.FEL/FL20H.PH.MOTOR/MOTOR2.MOT3/FPOS desc: Position of the BL filter wheel 2 - to correlate with the filter material please look units: degree{{/code}}
550 +
551 +[[Contents>>doc:||anchor="Contents"]]
552 +
553 +\\
554 +
555 +\\
556 +
537 537  (% class="wrapped" %)
538 538  |=(((
539 -[[DAQ name>>url:http://hasfweb.desy.de/bin/view/Setup/HDF5main?sortcol=0;table=1;up=0#sorted_table||title="Sort by this column" rel="nofollow" shape="rect"]]
559 +DAQ name
540 540  )))|=(((
541 -[[HDF5 name>>url:http://hasfweb.desy.de/bin/view/Setup/HDF5main?sortcol=1;table=1;up=0#sorted_table||title="Sort by this column" rel="nofollow" shape="rect"]]
561 +HDF5 name
542 542  )))
543 543  |(((
544 544  FLASH.UTIL/FL2.UND.MOTOR/FL2SASE3/GAP
... ... @@ -723,7 +723,7 @@
723 723  
724 724  \\
725 725  
726 -\\
746 +[[Contents>>doc:||anchor="Contents"]]
727 727  
728 728  === HDF5 structure revisions ===
729 729  
... ... @@ -739,9 +739,9 @@
739 739  
740 740  (% class="wrapped" %)
741 741  |=(((
742 -[[earlier HDF path (vers. 0.2)>>url:http://hasfweb.desy.de/bin/view/Setup/HDF5main?sortcol=0;table=2;up=0#sorted_table||title="Sort by this column" rel="nofollow" shape="rect"]]
762 +earlier HDF path (vers. 0.2)
743 743  )))|=(((
744 -[[is now (vers. 0.3)>>url:http://hasfweb.desy.de/bin/view/Setup/HDF5main?sortcol=1;table=2;up=0#sorted_table||title="Sort by this column" rel="nofollow" shape="rect"]]
764 +is now (vers. 0.3)
745 745  )))
746 746  |(((
747 747  /Photon Diagnostic/GMD/Beam position/position BDA x
... ... @@ -836,7 +836,7 @@
836 836  
837 837  \\
838 838  
839 -\\
859 +[[Contents>>doc:||anchor="Contents"]]
840 840  
841 841  \\
842 842  
... ... @@ -895,14 +895,16 @@
895 895  GMD_Spectrum=h5read(hdf5file,'/Photon Diagnostic/GMD/Pulse resolved energy/energy BDA',[1 Start_event],[40 Number_of_events] );
896 896  )))
897 897  
898 -\\
918 +[[Contents>>doc:||anchor="Contents"]]
899 899  
900 900  === How to read HDF5 with Python via FLASHH5 ===
901 901  
902 -With [[FlashH5>>url:http://hasfweb.desy.de/bin/view/Setup/FlashH5||shape="rect" class="twikiLink"]] we provide h5py based examples to access and evaluate FLASH's HDF5 files.
922 +With [[FlashH5>>doc:FLASHUSER.FLASHH5 for easier access of FLASH's HDF5 files]] we provide h5py based examples to access and evaluate FLASH's HDF5 files.
903 903  
904 904  \\
905 905  
906 906  == HDF5 and DOOCS ==
907 907  
908 -Here is an outdated [[list with the available properties that are always saved (PBD) for FLASH1 as>>url:http://hasfweb.desy.de/pub/Setup/HDF5main/FLASH1__DaqChannel2HdfNamePbd.xlsx||shape="rect"]] HDF5 names and the corresponding DOOCS names
928 +Here is an outdated [[list with the available properties that are always saved (PBD) for FLASH1 as>>attach:FLASH1__DaqChannel2HdfNamePbd.xlsx]] HDF5 names and the corresponding DOOCS names
929 +
930 +[[Contents>>doc:||anchor="Contents"]]