Changes for page The FLASH HDF5 structure

Last modified by sndueste on 2025/02/06 10:55

From version 78.1
edited by sndueste
on 2023/11/01 16:51
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To version 13.1
edited by sndueste
on 2019/09/17 16:58
Change comment: There is no comment for this version

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1 -favourite|data|hdf5|analysis|offline
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1 -{{layout}}
2 -{{layout-section ac:type="single"}}
3 -{{layout-cell}}
4 4  == Contents ==
5 5  
6 6  
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11 11  
12 12  == General information about HDF5 ==
13 13  
14 -HDF5 is a data format maintained by the HDF group. For detailed general information see [[here~[~[image:url:http://hasfweb.desy.de/pub/TWiki/TWikiDocGraphics/external-link.gif~|~|width="13" height="12"~]~]>>url:https://portal.hdfgroup.org/display/support||shape="rect"]]
11 +HDF5 is a data format maintained by the HDF group. For detailed general information see [[here~[~[image:url:http://hasfweb.desy.de/pub/TWiki/TWikiDocGraphics/external-link.gif~|~|width="13" height="12"~]~]>>url:https://www.hdfgroup.org/HDF5/||shape="rect"]]
15 15  
16 -To download the HDF5 Viewer click [[here~[~[image:url:http://hasfweb.desy.de/pub/TWiki/TWikiDocGraphics/external-link.gif~|~|width="13" height="12"~]~]>>url:https://portal.hdfgroup.org/display/support/Download+HDFView||shape="rect"]]
13 +To download the HDF5 Viewer click [[here~[~[image:url:http://hasfweb.desy.de/pub/TWiki/TWikiDocGraphics/external-link.gif~|~|width="13" height="12"~]~]>>url:https://support.hdfgroup.org/products/java/hdfview/index.html||shape="rect"]]
17 17  
18 18  For use on the DESY Maxwell or PAL (max-fsc or pal) **hdfview** is available in the xray module :
19 19  {{code language="none"}}> module load xray{{/code}}
20 20  {{code language="none"}}> hdfview{{/code}}
21 21  
22 -or you can use
23 -
24 -{{code language="none"}}> silx view{{/code}}
25 -
26 -\\
27 -
28 28  [[Contents>>doc:||anchor="Contents"]]
29 29  
30 -== The FLASH HDF5 format ==
21 +== FLASH HDF5 structure ==
31 31  
32 -FLASH provides a conversion of its data acquisition (DAQ) to the commonly used [[HDF5>>url:https://www.hdfgroup.org/solutions/hdf5/||shape="rect"]] format. Correlated  data are mapped by a primary index called **train ID**. Every data set has an individual index of train IDs to identify the data even when data are missing or deviate in update rate. If the data set of choice contains gaps,  users have to decide how to treat missing values. DAQ channels are spread across various files with one file name pattern for each DAQ. This means users have to assemble data from different files if necessary.
23 +The photon diagnostic, electron diagnostic and beamline information as well as the information about the pump-probe laser and the infrastructure offered for users (GHz/MHz ADCs) can be included in one HDF5 file which is organised according to train IDs. The general structure is:
33 33  
34 -The hierarchy is realized using a human readable named HDF tree with each DAQ channel containing the data sets "//value//" and "//index//". Additionally, the HDF group //zraw// contains a tree of the original DAQ channel names.
25 +* Electron Diagnostic
26 +* Photon Diagnostics
27 +* Beamlines
28 +* Experiment
29 +* Timing
30 +[[~[~[image:url:http://hasfweb.desy.de/pub/Setup/HDF5main/HDF5_structure.jpg~|~|alt="HDF5_structure.jpg" width="700" height="500"~]~]>>attach:HDF5_structure.jpg]]
35 35  
36 -Reference implementation, which follows the concept of Python libraries like Pandas, Xarray, or Dask, is given below.
32 +A detailled description of (most) channels can be found in the lower part of the hdf5 viewer:
33 +[[~[~[image:url:http://hasfweb.desy.de/pub/Setup/HDF5main/HDF5_structure_desc.jpg~|~|alt="HDF5_structure_desc.jpg" width="341" height="413"~]~]>>attach:HDF5_structure_desc.jpg]]
37 37  
38 -\\
35 +[[Contents>>doc:||anchor="Contents"]]
39 39  
40 -{{expand title="Discontinued HDF formats"}}
41 -=== Comparison to FLASH's deprecated HDF formats ===
42 -
43 -Before 2021, FLASH provided two different HDF formats formally known as //near-online// and //offline// HDF files.
44 -
45 -All data sets were aligned by the same global index by filling in missing data. Fast DAQ channels  (pulse synchronous data - update 10 Hz) are filled in by NaN or 0, slow channels (not pulse synchronous data - update e.g. 1 Hz ) are interpolated by the DAQs libraries, by keeping the value constant up to the next change.
46 -
47 -While the near-online HDF files were converted live during the beamtime, the offline HDF files were manually compiled weeks/months later. Near-online HDF files were used by a provided API [[BeamtimeDaqAccess>>url:https://confluence.desy.de/display/FLASHUSER/Near-Online+data+analysis#Near-Onlinedataanalysis-BriefUserGuidetoBeamtimeDAQAccess||shape="rect"]], which also searches for DAQ channels in files. With assembled files "by run", all DAQ channels were existing in the same HDF file. While shorter runs usually fitted into one file, longer runs still had to be aggregated over several files. The creation of the assembled type of files still involves the use of fairly unstable DAQ Mex-functions As the environment required for using the Mex-functions is already deprecated, its continued existence is uncertain.
48 -
49 -The HDF hierarchy is almost identical in all formats. While in the the recent format each DAQ channel contains the data sets "value" and "index", the deprecated format had one data set for each DAQ channel. The deprecated formats supplies no time axis parameters for spectra data types.
50 -
51 51  \\
52 52  
53 -**HDF5 example files (old format)**
39 +== Most popular FLASH parameters and their names in HDF5 ==
54 54  
55 -Here we have a few HDF5 samples (User data combined with Photon diagnostics data) from a few beamtimes showing the different kind options.
41 +The complete list for the relation between DOOCS names and HDF5 names for the recordable parameters can be found in [[DESY's Repository~[~[image:url:http://hasfweb.desy.de/pub/TWiki/TWikiDocGraphics/external-link.gif~|~|width="13" height="12"~]~]>>url:https://stash.desy.de/projects/CS/repos/pah/browse/src/camp/data/channel2HdfName.dat||shape="rect"]].
42 +The most common and often used ones are summarized below:
56 56  
57 -[[image:attach:image2019-10-21_17-2-50.png||thumbnail="true" width="300"]] [[download HDF5 (Images @ FL2)>>url:https://desycloud.desy.de/index.php/s/nyEgeCWJFC4gao2||shape="rect"]]
58 -
59 -\\
60 -
61 -[[~[~[image:attach:image2019-10-22_10-52-27.png~|~|thumbnail="true" width="300"~]~]download HDF5 (GHz ADC and OPIS @ FL2)>>url:https://desycloud.desy.de/index.php/s/AeA2kPNNnZgX95A||shape="rect"]]
62 -
63 -\\
64 -
65 -\\
66 -{{/expand}}
67 -
68 -=== HDF examples: ===
69 -{{/layout-cell}}
70 -{{/layout-section}}
71 -
72 -{{layout-section ac:type="three_equal"}}
73 -{{layout-cell}}
74 -* ADC data as example for **fast** **data** (10 Hz):           
75 -
76 -\\
77 -
78 -[[image:attach:image2020-11-16_15-26-28.png||height="250"]]
79 -{{/layout-cell}}
80 -
81 -{{layout-cell}}
82 -* The //average// FEL pulse energy as example for the **slow** **data**. Here the data is not saved with 10 Hz  - thus not for every FEL pulse train.  The data is typically saved with 1 Hz if the values are changing (like the FEL energy) and every about 20 sec if there is no change for longer time ( e.g. motor set values). Thus to use the data together with the "fast" one, one has to interpolate the data as explained in the examples in the repos below show (e.g. {{code language="none"}}df['GMD_T_average'] = df['GMD_T_average'].interpolate(method='linear'){{/code}})
83 -
84 - ( as example only every 10th train ID is listed in the HDF group "index")
85 -
86 -[[image:attach:image2020-11-16_15-31-45.png||height="250"]]
87 -{{/layout-cell}}
88 -
89 -{{layout-cell}}
90 -* (((
91 -//zraw// group contains the **original DAQ (DOOCS) names**
92 -)))
93 -
94 - of the properties saved in the DESY internal raw format. (For experts)
95 -
96 -\\
97 -
98 -[[image:attach:image2020-11-16_16-26-3.png||height="400"]]
99 -{{/layout-cell}}
100 -{{/layout-section}}
101 -
102 -{{layout-section ac:type="single"}}
103 -{{layout-cell}}
104 -{{info}}
105 -=== There are different options that help you to work with the FLASH HDF5 data in Python ===
106 -
107 -* The currently developed option for large data sets: [[the FAB package>>url:https://hasfcpkg.desy.de/fab/fab.html||shape="rect"]] ... see below
108 -* and for smaller projects:  (% class="Object" %)[[https:~~/~~/gitlab.desy.de/christopher.passow/flash-daq-hdf>>url:https://gitlab.desy.de/christopher.passow/flash-daq-hdf||shape="rect"]]
109 -
110 -(% class="Object" %)See also the collection of Demo data and sample scripts : [[doc:FLASHUSER.Data Acquisition and controls.Data Access at FLASH (DAQ, gpfs,\.\.\.).Offline data analysis (DAQ).Collection of HDF5 sample data from different beamlines.WebHome]] and [[doc:FLASHUSER.Data Acquisition and controls.Data Access at FLASH (DAQ, gpfs,\.\.\.).Offline data analysis (DAQ).DEMO - Working with FLASH data.WebHome]]
111 -{{/info}}
112 -{{/layout-cell}}
113 -{{/layout-section}}
114 -
115 -{{layout-section ac:type="single"}}
116 -{{layout-cell}}
117 -
118 -
119 -== Complete list of recordable parameters ==
120 -
121 -The complete list for the relation between DOOCS names and HDF5 names for the recordable parameters can be found in [[DESY's Repository~[~[image:url:http://hasfweb.desy.de/pub/TWiki/TWikiDocGraphics/external-link.gif~|~|width="13" height="12"~]~]>>url:https://stash.desy.de/projects/CS/repos/pah/browse/src/camp/data/channel2HdfName.dat||shape="rect"]].
122 -\\
123 -
124 -== Most popular FLASH parameters and their names in HDF5, DOOCS and (raw) DAQ ==
125 -
126 -{{id name="DOOCSparameters"/}}
127 -
128 128  Note, the HDF group and data set names apply to our HDF tree version since vers. 0.3.0.
129 129  
130 130  \\
... ... @@ -131,6 +131,8 @@
131 131  
132 132  === FLASH1 ===
133 133  
50 +\\
51 +
134 134  ==== Beamline info (FLASH1) ====
135 135  
136 136  {{code language="none"}}/FL1/Beamlines/Attenuator/pressure{{/code}}
... ... @@ -161,7 +161,7 @@
161 161  //always saved (PBD)//
162 162  DOOCS prop : {{code language="none"}}TTF2.FEL/BLFILTERS1/FILTER1/FW.MOTOR.POS{{/code}}
163 163  DAQ channel: {{code language="none"}}TTF2.FEL/BLFILTERS1/FILTER1/FW.MOTOR.POS{{/code}}
164 -desc: Position of the BL filter wheel 1 - to correlate with the filter material please look [[here>>doc:FLASHUSER.jddd-linked help pages.Filter-Units.Filter wheels in FLASH1 and FLASH2.WebHome]]
82 +desc: Position of the BL filter wheel 1 - to correlate with the filter material please look [[here>>doc:FLASH.Filter history (BL filterwheel 12)]]
165 165  units: degree
166 166  \\
167 167  
... ... @@ -169,7 +169,7 @@
169 169  //always saved (PBD)//
170 170  DOOCS prop : {{code language="none"}}TTF2.FEL/BLFILTERS2/FILTER2/FW.MOTOR.POS{{/code}}
171 171  DAQ channel: {{code language="none"}}TTF2.FEL/BLFILTERS2/FILTER2/FW.MOTOR.POS{{/code}}
172 -desc: Position of the BL filter wheel 2 - to correlate with the filter material please look [[here>>doc:FLASHUSER.jddd-linked help pages.Filter-Units.Filter wheels in FLASH1 and FLASH2.WebHome]]
90 +desc: Position of the BL filter wheel 2 - to correlate with the filter material please look [[here>>doc:FLASH.Filter history (BL filterwheel 12)]]
173 173  units: degree
174 174  \\
175 175  
... ... @@ -199,32 +199,27 @@
199 199  \\
200 200  
201 201  
202 -NOTE: Aperture positions in the beamline as well as the positions of the beam steering mirrors are also saved. For more Info contact your local contact
120 +NOTE: Aperture positions in the beamline as well as the positions of the beam steering mirrors are also saved. for more Info contact your local contact
203 203  
204 204  [[Contents>>doc:||anchor="Contents"]]
205 205  
206 206  \\
207 207  
208 -==== Photon Diagnostics SASE ([[GMD>>url:http://photon-science.desy.de/facilities/flash/photon_diagnostics/gmd_intensity_and_position/index_eng.html||shape="rect"]]) ====
126 +==== Photon Diagnostics SASE ([[GMD>>url:http://photon-science.desy.de/facilities/flash/photon_diagnostics/gmd_intensity_and_position/index_eng.html||shape="rect"]]) / Spectrometer (FLASH1) ====
209 209  
210 -{{expand title="Discontinued GMD format (used until 2021)"}}
211 -(% style="color: rgb(0,0,0);" %)**Discontinued GMD data recording / evaluation  (VME + PhotonFlux ML server)**
212 -
213 213  {{code language="none"}}/FL1/Photon Diagnostic/GMD/Average energy/energy tunnel{{/code}}
214 -//always saved (PBD)//
215 -
216 -(% style="color: rgb(0,0,0);" %)DOOCS prop : {{code language="none"}}TTF2.DAQ/PHFLUX/OUT04/VAL{{/code}} (%%)
217 -(% style="color: rgb(0,0,0);" %)DAQ channel: {{code language="none"}}PBD.PHFLUX/TUNNEL.ENPULSEIC{{/code}}(%%)
218 -desc : calibrated average SASE Energy/pulse measured in the TUNNEL upstream the gas attenuator (ion current)
129 +//always saved (PBD)//
130 +DOOCS prop : {{code language="none"}}TTF2.DAQ/PHFLUX/OUT04/VAL{{/code}}
131 +DAQ channel: {{code language="none"}}PBD.PHFLUX/TUNNEL.ENPULSEIC{{/code}}
132 +desc : calibrated average SASE Energy/pulse measured in the TUNNEL before the attenuator (ion current)
219 219  units : microJ
220 220  
221 221  {{code language="none"}}/FL1/Photon Diagnostic/GMD/Pulse resolved energy/energy tunnel{{/code}}
222 -//always saved (PBD)//
223 -
136 +//always saved (PBD)//
224 224  DOOCS prop : {{code language="none"}}TTF2.DAQ/PHFLUX/OUT34/VAL{{/code}}
225 225  DAQ channel: {{code language="none"}}PBD.PHFLUX/TUNNEL.ENERGYPULSE.USER{{/code}}
226 226  desc :Energy per pulse Tunnel (from e-) - the values are set to "0" if there was no SASE beam in the FEL
227 -units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision) **[[see here for help>>doc:FLASHUSER.jddd-linked help pages.Calibrating the pulse resolved (electron) data from GMD.WebHome]]**
140 +units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision) [[see here for help>>doc:FLASH.Calibrating the pulse resolved (electron) data from GMD]]
228 228  
229 229  {{code language="none"}}/FL1/Photon Diagnostic/GMD/Pulse resolved energy/energy tunnel (raw){{/code}}
230 230  //always saved (PBD)//
... ... @@ -231,11 +231,10 @@
231 231  DOOCS prop : {{code language="none"}}TTF2.DAQ/PHFLUX/OUT14/VAL{{/code}}
232 232  DAQ channel: {{code language="none"}}PBD.PHFLUX/TUNNEL.ENERGYPULSE.FF{{/code}}
233 233  desc :Energy per pulse Tunnel (from e-) - uncorrected values. There are also values saved if there was no beam ... just background noise
234 -units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision) **[[see here for help>>doc:FLASHUSER.jddd-linked help pages.Calibrating the pulse resolved (electron) data from GMD.WebHome]]**
147 +units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision) [[see here for help>>doc:FLASH.Calibrating the pulse resolved (electron) data from GMD]]
235 235  
236 236  {{code language="none"}}/FL1/Photon Diagnostic/GMD/Average energy/energy BDA{{/code}}
237 -//always saved (PBD)//
238 -
150 +//always saved (PBD)//
239 239  DOOCS prop : {{code language="none"}}TTF2.DAQ/PHFLUX/OUT05/VAL{{/code}}
240 240  DAQ channel: {{code language="none"}}PBD.PHFLUX/BDA.ENPULSEIC{{/code}}
241 241  desc : calibrated average SASE Energy/pulse measured in the BDA (in the experimental hall) after the attenuator (ion current)
... ... @@ -242,12 +242,11 @@
242 242  units : microJ
243 243  
244 244  {{code language="none"}}/FL1/Photon Diagnostic/GMD/Pulse resolved energy/energy BDA{{/code}}
245 -//always saved (PBD)//
246 -
157 +//always saved (PBD)//
247 247  DOOCS prop : {{code language="none"}}TTF2.DAQ/PHFLUX/OUT35/VAL{{/code}}
248 248  DAQ channel: {{code language="none"}}PBD.PHFLUX/BDA.ENERGYPULSE.USER{{/code}}
249 249  desc :Energy per pulse BDA (from e-) - the values are set to "0" if there was no SASE beam in the FEL
250 -units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision) **[[see here for help>>doc:FLASHUSER.jddd-linked help pages.Calibrating the pulse resolved (electron) data from GMD.WebHome]]**
161 +units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision) [[see here for help>>doc:FLASH.Calibrating the pulse resolved (electron) data from GMD]]
251 251  
252 252  {{code language="none"}}/FL1/Photon Diagnostic/GMD/Pulse resolved energy/energy BDA (raw){{/code}}
253 253  //always saved (PBD)//
... ... @@ -254,65 +254,13 @@
254 254  DOOCS prop : {{code language="none"}}TTF2.DAQ/PHFLUX/OUT15/VAL{{/code}}
255 255  DAQ channel: {{code language="none"}}PBD.PHFLUX/BDA.ENERGYPULSE.FF{{/code}}
256 256  desc :Energy per pulse BDA (from e-) - uncorrected values. There are also values saved if there was no beam ... just background noise
257 -units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision)** [[see here for help>>doc:FLASHUSER.jddd-linked help pages.Calibrating the pulse resolved (electron) data from GMD.WebHome]]**
258 -{{/expand}}
168 +units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision) [[see here for help>>doc:FLASH.Calibrating the pulse resolved (electron) data from GMD]]
259 259  
260 -\\
261 -
262 -(% style="letter-spacing: 0px; color: rgb(0, 0, 0)" %)**NEW (since 2021) GMD data recording / evaluation  (same format as FLASH2 and XFEL)**
263 -
264 -{{code language="none"}}/FL1/Photon Diagnostic/GMD/Average energy/energy tunnel{{/code}}
265 -//always saved (PBD)//
266 -(% style="color: rgb(0,0,0);" %)DOOCS prop : {{code language="none"}}FLASH.FEL/XGM.PHOTONFLUX/FL1.TUNNEL/PHOTONFLUX.UJ{{/code}} (%%)
267 -(% style="color: rgb(0,0,0);" %)DAQ channel: {{code language="none"}}FLASH.FEL/XGM.PHOTONFLUX/FL1.TUNNEL/PHOTONFLUX.UJ{{/code}}
268 -
269 -desc : calibrated average SASE Energy/pulse measured in the TUNNEL upstream the gas attenuator
270 -units : microJ
271 -
272 -\\
273 -
274 -{{code language="none"}}/FL1/Photon Diagnostic/GMD/Pulse resolved energy/energy tunnel{{/code}}
275 -//always saved (PBD)//
276 -
277 -(% style="color: rgb(0,0,0);" %)DOOCS prop : 
278 -{{code language="none"}}FLASH.FEL/XGM.INTENSITY/FL1.TUNNEL/INTENSITY.TD{{/code}}DAQ channel: {{code language="none"}}FLASH.FEL/XGM.INTENSITY/FL1.TUNNEL/INTENSITY.TD{{/code}}
279 -
280 -desc : Energy per pulse measured in the Tunnel.  In addition measurement errors and beam position are included for EACH pulse in the pulse train  !! (see below)
281 -units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision)** [[see here for help>>doc:FLASHUSER.jddd-linked help pages.Calibrating the pulse resolved (electron) data from GMD.WebHome]]**
282 -
283 -{{info title="GMD pulse resolved data structure"}}
284 -For every pulse in the pulse train the information is saved:
285 -
286 -
287 -1. **Intensity per pulse** (a.u. (more or less µJ ))
288 -1. Intensity per pulse (auxillary GMD) - not used
289 -1. Position horizontal (mm, for a single pulse the position information may be very noisy  - talk to your local contact)
290 -1. Position vertical (mm, for a single pulse the position information may be very noisy  - talk to your local contact)
291 -1. **Intensity per pulse sigma** (a.u. (more or less µJ ), (% style="color: rgb(0,0,0);" %)This parameter gives an indication of the error of the measurement of the pulse energy. This takes signal to noise,  detector resolution, uncertainties in crossection etc into account. (it is NOT the measurement of the statistical fluctuation of the SASE pulses)(%%))
292 -1. Position horizontal sigma  (mm, indicates the error (RMS, sigma) of the measurement according to known uncertainties and signal to noise)
293 -1. Position vertical sigma  (mm, indicates the error (RMS, sigma) of the measurement according to known uncertainties and signal to noise)
294 -1. Combined warning and error flags
295 -
296 -The pulse energy and the error are plotted for the first bunch of the pulse trains saved in this 
297 -file
298 -
299 -
300 -[[image:attach:image2021-2-9_10-51-6.png||height="250"]]
301 -
302 -\\
303 -{{/info}}
304 -
305 -All values for the GMD are also available for the** BDA GMD **which is located in the experimental hall down stream the gas attenuator. If the attenuator is on the ratio between BDA and Tunnel signal shows the attenuation. **BUT NOTE** that the filter units  are downstream the GMD. So if filters  are used this influence is NOT measured by the GMD BDA !
306 -
307 -\\
308 -
309 -Besides  pulse energy the GMD also provides information about the beam position
310 -
311 311  {{code language="none"}}/FL1/Photon Diagnostic/GMD/Beam position/position BDA horizontal{{/code}}
312 312  //always saved (PBD)//
313 313  DOOCS prop : {{code language="none"}}FLASH.FEL/XGM.POSMON/FL1.BDA/IX.POS{{/code}}
314 314  DAQ channel: {{code language="none"}}FLASH.FEL/XGM.POSMON/FL1.BDA/IX.POS{{/code}}
315 -desc :Beam position of the photon Beam determined by the GMD (BDA, x=horizontal)
174 +desc :Beam position of the photon Beam determined by the [[GMD>>doc:FLASH.Gas Monitor Detector]] (BDA, x=horizontal)
316 316  units : mm
317 317  
318 318  {{code language="none"}}/FL1/Photon Diagnostic/GMD/Beam position/position BDA vertical{{/code}}
... ... @@ -319,7 +319,7 @@
319 319  //always saved (PBD)//
320 320  DOOCS prop : {{code language="none"}}FLASH.FEL/XGM.POSMON/FL1.BDA/IY.POS{{/code}}
321 321  DAQ channel: {{code language="none"}}FLASH.FEL/XGM.POSMON/FL1.BDA/IY.POS{{/code}}
322 -desc :Beam position of the photon Beam determined by the GMD (BDA, y=vertical)
181 +desc :Beam position of the photon Beam determined by the [[GMD>>doc:FLASH.Gas Monitor Detector]] (BDA, y=vertical)
323 323  units : mm
324 324  
325 325  {{code language="none"}}/FL1/Photon Diagnostic/GMD/Beam position/position tunnel horizontal{{/code}}
... ... @@ -326,7 +326,7 @@
326 326  //always saved (PBD)//
327 327  DOOCS prop : {{code language="none"}}FLASH.FEL/XGM.POSMON/FL1.TUNNEL/IX.POS{{/code}}
328 328  DAQ channel: {{code language="none"}}FLASH.FEL/XGM.POSMON/FL1.TUNNEL/IX.POS{{/code}}
329 -desc :Beam position of the photon Beam determined by the GMD (TUNNEL, x=horizontal)
188 +desc :Beam position of the photon Beam determined by the [[GMD>>doc:FLASH.Gas Monitor Detector]] (TUNNEL, x=horizontal)
330 330  units : mm
331 331  
332 332  {{code language="none"}}/FL1/Photon Diagnostic/GMD/Beam position/position tunnel vertical{{/code}}
... ... @@ -333,13 +333,9 @@
333 333  //always saved (PBD)//
334 334  DOOCS prop : {{code language="none"}}FLASH.FEL/XGM.POSMON/FL1.TUNNEL/IY.POS{{/code}}
335 335  DAQ channel: {{code language="none"}}FLASH.FEL/XGM.POSMON/FL1.TUNNEL/IY.POS{{/code}}
336 -desc :Beam position of the photon Beam determined by the GMD (TUNNEL, y=vertical)
195 +desc :Beam position of the photon Beam determined by the [[GMD>>doc:FLASH.Gas Monitor Detector]] (TUNNEL, y=vertical)
337 337  units : mm
338 338  
339 -\\
340 -
341 -==== Spectrometer (FLASH1) ====
342 -
343 343  {{code language="none"}}/FL1/Photon Diagnostic/Wavelength/Tunnelspectrometer/wavelength{{/code}}
344 344  _always saved (when Spectrum is measured !!) (PBD) _
345 345  DOOCS prop : {{code language="none"}}TTF2.EXP/PHOTONWL.ML/WAVE_LENGTH/VAL.TD{{/code}}
... ... @@ -417,122 +417,16 @@
417 417  units: nC
418 418  
419 419  =====
420 -arrival time (BAM) =====
275 +arrival time =====
421 421  
422 -{{info title="BAM information: updates 2022"}}
423 -* see: [[Info collection about the BAMs and how to use the BAM data>>url:https://confluence.desy.de/display/FLASHUSER/Info+collection+for+the+BAM||shape="rect"]]
424 -* The data format of the BAM has been completely altered in the 2022 shutdown
425 -* before 2022 BAMs were always saving the arrival time information for each 1µs bucked regardless if there were electrons in the accelerator or not. IN addition the arrival times for  FL1 and FL2 were saved in the same parameter ...
426 -* THIS is now different. There are new parameters saving only the arrival times for pulses that go to FL1 and to FL2 (in detail: first time slot of the accelerator and second)
427 -* There has been also a renaming  (and relocation) of the BAMs.
428 -** acc:  4DBC3 → FL0.DBC2
429 -** FL1: 1SFELC →  FL1.SFELC
430 -** FL2: FL2XTDS → (% style="color: rgb(23,43,77);" %)FL2.SEED5
431 -* for more Info: [[LINK to detailed infos from MSK>>url:https://confluence.desy.de/display/SDiagPublic/BAM+Data+Structure||shape="rect"]]
432 -* [[Link a collection of papers related to the BAM and the analysis of pump-probe experiments>>doc:FLASHUSER.Additional helpful things.FLASH beamlines and instruments references.WebHome]]
433 -* a recent  [[talk about the working principle of the BAM>>attach:BAM-basics and outlook-2018_DESY-template_16-9Format.pdf]]
434 -{{/info}}
435 -
436 -\\
437 -
438 -{{expand title="Discontinued BAM format (used until end 2021)"}}
439 -(% style="color: rgb(0,0,0);" %)**Discontinued BAM data recording **
440 -
441 441  {{code language="none"}}/FL1/Electron Diagnostic/BAM/4DBC3/electron bunch arrival time (low charge){{/code}}
442 442  //always saved (PBD)//
443 443  DOOCS prop : {{code language="none"}}FLASH.SDIAG/BAM/4DBC3/LOW_CHARGE_ARRIVAL_TIME{{/code}}
444 444  DAQ channel: {{code language="none"}}FLASH.SDIAG/BAM.DAQ/4DBC3.LOW_CHARGE_ARRIVAL_TIME{{/code}}
445 -desc: Electron bunch arrival time measured with the BAM inside the accelerator - however shows a very good correlation to the arrivaltime  of the XUV pulses in the experiment (pulse resolved data).
446 -units: ps (bigger numbers indicate later arrivaltime of the electrons)
281 +desc: Electron bunch arrival time measured with the BAM (more or less) before the undulator (pulse resolved data)
282 +units: ps (bigger numbers indicate later arrivaltime of the electrons)
283 +note: besides the arivaltime from FLASH1 there is also the FLASH2/3 electron arrival time saved. [[LINK to detailled infos from MSK (may only work inside DESY network~[~[image:url:http://hasfweb.desy.de/pub/TWiki/TWikiDocGraphics/external-link.gif~|~|width="13" height="12"~]~]>>url:http://www.desy.de/~~mbock/pages/BAM_daq_channel_descriptions.html||shape="rect"]] and to a recent  [[talk about the working principle of the BAM>>url:https://confluence.desy.de/download/attachments/134216957/BAM-basics_and_outlook-2018_DESY-template_16-9Format.pdf?version=1&modificationDate=1565162143328&api=v2||shape="rect"]]
447 447  
448 -\\
449 -
450 -{{code language="none"}}/FL1/Electron Diagnostic/BAM/1SFELC/electron bunch arrival time (low charge){{/code}}
451 -//always saved (PBD)//
452 -DOOCS prop : {{code language="none"}}FLASH.SDIAG/BAM/1SFELC/LOW_CHARGE_ARRIVAL_TIME{{/code}}
453 -DAQ channel: {{code language="none"}}FLASH.SDIAG/BAM.DAQ/1SFELC.LOW_CHARGE_ARRIVAL_TIME{{/code}}
454 -desc: Electron bunch arrival time measured with the BAM  before the undulator (pulse resolved data). This one was newly installed in 2020.
455 -units: ps (bigger numbers indicate later arrival time of the electrons)
456 -{{/expand}}
457 -
458 -====== **BAM FL0.DBC2**{{code language="none"}}{{/code}} ======
459 -
460 -(% style="color: rgb(255,102,0);" %)**DBC2**/electron bunch arrival time  (HDF5 name not yet implemented - see zraw)(%%)
461 -//always saved (PBD)//
462 -{{code language="none"}}/FL1/Electron Diagnostic/BAM/ {{/code}}DOOCS prop : FLASH.SDIAG/BAM/**FL0.DBC2**/ARRIVAL_TIME.ABSOLUTE.SA1.COMP
463 -DAQ (% style="color: rgb(0,0,0);" %)channel: FLASH.SDIAG/BAM/**FL0.DBC2**/ARRIVAL_TIME.ABSOLUTE.SA1.COMP (%%)
464 -desc: Electron bunch arrival time measured with the BAM inside the accelerator (after bunch compressor 2). The property contains only the arrival time of the bunches sent to FL1 (e.g. if there are 30 bunches in FL1 the first 30 values are the arrival time the remaining numbers  still may have arbitrary numbers looking like a signal which they are not ). These are the same values as the "raw" data below - just "cleaned". The values show a very good correlation to the arrival time  of the XUV pulses in the experiment (see help).
465 -
466 -units: fs (bigger numbers (typically) indicate later arrival times of the electrons).
467 -
468 -\\
469 -
470 -(% style="color: rgb(255,102,0);" %)DBC2/electron bunch arrival time (raw)  (HDF5 name not yet implemented - see zraw){{code language="none"}}/FL1/Electron Diagnostic/BAM/{{/code}}(%%)
471 -//always saved (PBD)//
472 -DOOCS prop : FLASH.SDIAG/BAM/FL0.DBC2/ARRIVAL_TIME.ABSOLUTE
473 -DAQ channel: (% style="color: rgb(0,0,0);" %)FLASH.SDIAG/BAM/FL0.DBC2/ARRIVAL_TIME.ABSOLUTE (%%)
474 -desc: Electron bunch arrival time measured with the BAM inside the accelerator (after bunch compressor 2). Here the complete bunch train from the FEL is recorded (FLASH1 and FLASH2 pulses). Thus there are values from FLASH 1 in the first part. they may be separated by several "0" values if the reprate is different from 1 MHz ...  - It shows a very good correlation to the arrival time  of the XUV pulses in the experiment (see help). 
475 -units: fs (bigger numbers (typically) indicate later arrival times of the electrons).
476 -
477 -\\
478 -
479 -(% style="color: rgb(255,102,0);" %)DBC2/error (HDF5 name not yet implemented - see zraw){{code language="none"}}/FL1/Electron Diagnostic/BAM/{{/code}}(%%)
480 -//always saved (PBD)//
481 -DOOCS prop : FLASH.SDIAG/BAM/FL0.DBC2/ARRIVAL_TIM(% style="color: rgb(0,0,0);" %)E.bamError(%%)
482 -DAQ channel: (% style="color: rgb(0,0,0);" %)FLASH.SDIAG/BAM/FL0.DBC2/ARRIVAL_TIME.BAMERROR(%%)
483 -desc: If the value is 0 , the BAM is working well. If it is non-zero there is a problem !!
484 -
485 -\\
486 -
487 -(% style="color: rgb(255,102,0);" %)DBC2/status  (HDF5 name not yet implemented - see zraw){{code language="none"}}/FL1/Electron Diagnostic/BAM/{{/code}}(%%)
488 -//always saved (PBD)//
489 -DOOCS prop : FLASH.SDIAG/BAM/FL0.DBC2/ARRIVAL_TIM(% style="color: rgb(0,0,0);" %)E..bamStatus.//1//(%%)
490 -DAQ channel(% style="color: rgb(0,0,0);" %): FLASH.SDIAG/BAM/FL0.DBC2/ARRIVAL_TIME.BAMSTATUS.1(%%)
491 -desc: (% style="letter-spacing: 0.0px;" %) status bit: 0 - data is valid; 1 - beam present; 2 - calibration ongoing; 3 - feedback enabled; 4 - feedback acting;  mostly check for bit 0 == 1 is sufficient
492 -
493 -\\
494 -
495 -====== **BAM FL1.SFELC**{{code language="none"}}{{/code}} ======
496 -
497 -(% style="font-family: SFMono-Medium , ~"SF Mono~" , ~"Segoe UI Mono~" , ~"Roboto Mono~" , ~"Ubuntu Mono~" , Menlo , Courier , monospace;letter-spacing: 0.0px;" %)/FL1/Electron Diagnostic/BAM/**SFELC**(% style="color: rgb(255,102,0);" %)/electron bunch arrival time  (HDF5 name not yet implemented - see zraw)
498 -
499 -//always saved (PBD)//
500 -(% style="color: rgb(23,43,77);" %)**FL1.SFELC**(%%)
501 -(% style="color: rgb(0,0,0);" %)channel: FLASH.SDIAG/BAM/(% style="color: rgb(0, 0, 0); color: rgb(23, 43, 77)" %)FL1.SFELC(% style="color: rgb(0,0,0);" %)/ARRIVAL_TIME.ABSOLUTE.SA1.COMP
502 -{{code language="none"}} DOOCS prop : FLASH.SDIAG/BAM//ARRIVAL_TIME.ABSOLUTE.SA1.COMPDAQ {{/code}}(% style="letter-spacing: 0.0px;" %)desc: Electron bunch arrival time measured  with the BAM  before the undulator (pulse resolved data). This one was newly installed in 2020.. The property contains only the arrival time of the bunches sent to FL1 (e.g. if there are 30 bunches in FL1 the first 30 values are the arrival time the remaining numbers still may have arbitrary numbers looking like a signal which they are not). These are the same values as the "raw" data below - just "cleaned". The values show a very good correlation to the arrival time  of the XUV pulses in the experiment (see help).
503 -units: fs (bigger numbers (typically) indicate later arrival times of the electrons).
504 -
505 -\\
506 -
507 -\\
508 -
509 -(% style="color: rgb(23,43,77);" %)SFELC(% style="color: rgb(255,102,0);" %)/electron bunch arrival time (raw) (HDF5 name not yet implemented - see zraw){{code language="none"}}/FL1/Electron Diagnostic/BAM/{{/code}}(%%)
510 -//always saved (PBD)//
511 -DOOCS prop : FLASH.SDIAG/BAM/(% style="color: rgb(23,43,77);" %)FL1.SFELC(%%)/ARRIVAL_TIME.ABSOLUTE
512 -DAQ channel:** **(% style="color: rgb(0,0,0);" %)FLASH.SDIAG/BAM/FL1.SFELC/ARRIVAL_TIME.ABSOLUTE (%%)
513 -desc: Electron bunch arrival time measured  with the BAM  before the undulator (pulse resolved data). This one was newly installed in 2020. Here the complete bunch train from the FEL is recorded (FLASH1 and FLASH2 pulses). Thus there are values from FLASH 1 in the first part. they may be separated by several "0" values if the reprate is different from 1 MHz ...  - It shows a very good correlation to the arrival time  of the XUV pulses in the experiment (see help). 
514 -units: fs (bigger numbers (typically) indicate later arrival times of the electrons).
515 -
516 -\\
517 -
518 -(% style="color: rgb(23,43,77);" %)SFELC(% style="color: rgb(255,102,0);" %)/error (HDF5 name not yet implemented - see zraw){{code language="none"}}/FL1/Electron Diagnostic/BAM/{{/code}}(%%)
519 -//always saved (PBD)//
520 -DOOCS prop : FLASH.SDIAG/BAM/(% style="color: rgb(23,43,77);" %)FL1.SFELC(%%)/ARRIVAL_TIM(% style="color: rgb(0,0,0);" %)E.bamError(%%)
521 -DAQ channel(% style="color: rgb(0,0,0);" %): FLASH.SDIAG/BAM/FL1.SFELC/ARRIVAL_TIME.BAMERROR(%%)
522 -desc: If the value is 0 , the BAM is working well. If it is non-zero there is a problem !!
523 -
524 -\\
525 -
526 -(% style="color: rgb(23,43,77);" %)SFELC(% style="color: rgb(255,102,0);" %)/status  (HDF5 name not yet implemented - see zraw){{code language="none"}}/FL1/Electron Diagnostic/BAM/{{/code}}(%%)
527 -//always saved (PBD)//
528 -DOOCS prop : FLASH.SDIAG/BAM/(% style="color: rgb(23,43,77);" %)FL1.SFELC(%%)/ARRIVAL_TIM(% style="color: rgb(0,0,0);" %)E..bamStatus.//1//(%%)
529 -DAQ chann(% style="color: rgb(0,0,0);" %)el: FLASH.SDIAG/BAM/FL1.SFELC/ARRIVAL_TIME.BAMSTATUS.1(%%)
530 -desc: status bit: 0 - data is valid; 1 - beam present; 2 - calibration ongoing; 3 - feedback enabled; 4 - feedback acting;  mostly check for bit 0 == 1 is sufficient
531 -
532 -\\
533 -
534 -\\
535 -
536 536  ===== electron beam profile =====
537 537  
538 538  {{code language="none"}}/FL1/Electron Diagnostic/Electron bunch profile/TDS profile{{/code}}
... ... @@ -561,7 +561,7 @@
561 561  ===== electron bunch energy =====
562 562  
563 563  {{code language="none"}}/FL1/Electron Diagnostic/Electron energy/average electron energy{{/code}}
564 -//always saved (PBD)//
313 +_always saved (PBD)
565 565  DOOCS prop : {{code language="none"}}TTF2.DAQ/ENERGY.DOGLEG/E_INTRA_MEAN/VAL{{/code}}
566 566  DAQ channel: {{code language="none"}}PBD.ENERGY.DOGLEG/E_MEAN{{/code}}
567 567  desc: electron bunch energy (average over the bunch train)
... ... @@ -569,7 +569,7 @@
569 569  \\
570 570  
571 571  {{code language="none"}}/FL1/Electron Diagnostic/Electron energy/pulse resolved energy{{/code}}
572 -//always saved (PBD)//
321 +_always saved (PBD)
573 573  DOOCS prop : {{code language="none"}}TTF2.DAQ/ENERGY.DOGLEG/E_SPECT/VAL.TD{{/code}}
574 574  DAQ channel: {{code language="none"}}PBD.ENERGY.DOGLEG/E_SPECT{{/code}}
575 575  desc: electron bunch energy bunch resolved
... ... @@ -578,7 +578,7 @@
578 578  \\
579 579  
580 580  {{code language="none"}}/FL1/Electron Diagnostic/Electron energy/wavelength bunch train average{{/code}}
581 -//always saved (PBD)//
330 +_always saved (PBD)
582 582  DOOCS prop : {{code language="none"}}TTF2.DAQ/ENERGY.DOGLEG/LAMBDA_MEAN/VAL{{/code}}
583 583  DAQ channel: {{code language="none"}}PBD.ENERGY.DOGLEG/LAMBDA_MEAN{{/code}}
584 584  desc: Wavelength calculated by the electron bunch energy (average over the bunch train) (FLASH1)
... ... @@ -603,11 +603,11 @@
603 603  
604 604  ===== set number of pulses =====
605 605  
606 -(% style="color: rgb(255, 0, 0); color: rgb(255, 102, 0)" %)(HDF5 name not yet implemented - see zraw)(% style="color: rgb(255,0,0);" %){{code language="none"}}/FL1/Timing/set number of bunches {{/code}}(%%)
355 +{{code language="none"}}/FL1/Timing/set number of bunches{{/code}}
607 607  //always saved (PBD)//
608 -DOOCS prop : {{code language="none"}}FLASH.DIAG/TIMINGINFO/TIME1.BUNCH_FIRST_INDEX.1 [4th number]{{/code}}
609 -DAQ channel: {{code language="none"}}FLASH.DIAG/TIMINGINFO/TIME1.BUNCH_FIRST_INDEX.1 [4th number]{{/code}}
610 -desc: Number of bunches set in the control (timing) system.  The property contains 4 numbers. the last one is the number of pulses (see also [[doc:FLASH.Timing properties]] (internal link)).  If pulses are used for diagnostic of the protection system of the accelerator limits the number of bunches to be accelerated and thus the actual number of pulses may be smaller than the set one 
357 +DOOCS prop : {{code language="none"}}FLASH.DIAG/TOROID.ML/3GUN/NUMBEROFBUNCHES.FLASH1{{/code}}
358 +DAQ channel: {{code language="none"}}TTF2.UTIL/LASER.CONTROL/GUN/PULSE_NUM{{/code}}
359 +desc: Number of pulses set at the gun (FLASH1)
611 611  units:
612 612  
613 613  ===== actual number of pulses =====
... ... @@ -626,7 +626,7 @@
626 626  //always saved (PBD)//
627 627  DOOCS prop : {{code language="none"}}TTF2.DIAG/PBD.TOROID.ML/12EXP/CHARGE.TD{{/code}}
628 628  DAQ channel: {{code language="none"}}TTF2.DIAG/PBD.TOROID.ML/12EXP{{/code}}
629 -desc: The bunch pattern as function of time in a burst recorded by toroid diagnostic BEHIND the undulator. (FLASH1)
378 +desc: The bunch pattern as function of time in a burst recorded by toroide diagnostic BEHIND the undulator. (FLASH1)
630 630  units:
631 631  \\
632 632  
... ... @@ -636,7 +636,7 @@
636 636  //always saved (PBD)//
637 637  DOOCS prop : {{code language="none"}}none{{/code}}
638 638  DAQ channel: {{code language="none"}}none{{/code}}
639 -desc: Each 10 Hz burst has its unique train ID. For the HDF5 data set the ID is the same for all parameters with the same index (note camera images may be shifted by 1 ID - talk to the experts !)
388 +desc: Each 10 Hz burst has its unique train ID. For the HDF5 dataset the ID is the same for all parameters with the same index (note camera images may be shifted by 1 ID - talk to the experts !)
640 640  units:
641 641  \\
642 642  
... ... @@ -643,7 +643,7 @@
643 643  ===== Train time =====
644 644  
645 645  {{code language="none"}}/Timing/train time{{/code}}
646 -desc:Local time as array of day, hour, minute, second, and centisecond. This data set is meant for visualization purposes only. For correlations use the train ID or the Unix time of the time stamp
395 +desc:Local time as array of day, hour, minute, second, and centisecond. This dataset is meant for visualisation purposes only. For correlations use the train ID or the Unix time of the time stamp
647 647  units: d h min s cs
648 648  \\
649 649  
... ... @@ -659,43 +659,6 @@
659 659  
660 660  ==== Pump Probe Laser (FLASH1) ====
661 661  
662 -**PIGLET (PG laser)**
663 -
664 -**{{code language="none"}}/FL1/Experiment/Pump probe laser{{/code}}**
665 -
666 -FLASH.LASER/FLACPUPGLASER1.PULSEENERGY/DIAG1out/PULSEENERGY.MEAN 
667 -FLASH.LASER/FLACPUPGLASER1.PULSEENERGY/PG1_incoupl/PULSEENERGY.MEAN 
668 -FLASH.LASER/FLACPUPGLASER1.PULSEENERGY/PG2_incoupl/PULSEENERGY.MEAN 
669 -FLASH.SYNC/LASER.LOCK.EXP/FLASH1.MOD1.PG.OSC/FMC0.MD22.1.ENCODER_POSITION.RD 
670 -FLASH.SYNC/LASER.LOCK.EXP/FLASH1.MOD1.PG.OSC/FMC0.MD22.1.ENCODER_POSITION_RAW.RD 
671 -FLASH.SYNC/LASER.LOCK.EXP/FLASH1.MOD1.PG.OSC/FMC0.MD22.1.POSITION.RD
672 -
673 -**BL - Hidra laser **
674 -
675 -Property,Units,Description
676 -FLASH.LASER/MODBL.CAM/BL1.13.AC/DAQ_CHANNEL,'AU','FL1HIDRAPP1 Autocorrelation (IR) ROI readout'
677 -FLASH.LASER/MODBL.CAM/BL1.14.VF/DAQ_CHANNEL,'AU','FL1HIDRAPP1 Virtual Focus Camera (IR) ROI readout'
678 -FLASH.LASER/MODBL.SENSORBOARD/PDTRIG_CAMP/DAQ_CHANNEL,'au','FL1PPL Energy channels'
679 -FLASH.LASER/MODBL.SPECT/CAMP_IR/DAQ_CHANNEL,'au','FL1PPL BL Table Spectrum'
680 -FLASH.LASER/HIDRAPP1.SPECTRUM_ANALYSIS/CAMP_IR/DAQ_CHANNEL,'au','FL1PPL Spectrum Analysis'
681 -FLASH.SYNC/LASER.LOCK.EXP/F1.PPL.OSC/FMC0.MD22.1.POSITION.RD,'ps','FL1PPL Optical Delay Line (act)'
682 -FLASH.SYNC/LASER.LOCK.EXP/F1.PPL.OSC/FMC0.MD22.1.POSITION_SET.WR,'ps','FL1PPL Optical Delay Line (set)'
683 -FLASH.SYNC/LASER.LOCK.EXP/F1.PPL.OSC/FMC0.MD22.1.ENCODER_POSITION.RD,'ps','FL1PPL Optical Delay Line (Encoder Readback)'
684 -FLASH.FEL/FLAPPBEAMLINES.MOTOR/CAMP_Delayline/FPOS,'ps','FL1PPL NIR delay BL1 table (act)'
685 -FLASH.FEL/FLAPPBEAMLINES.MOTOR/CAMP_Delayline/FPOS.SET,'ps','FL1PPL NIR delay BL1 table (set)'
686 -FLASH.FEL/FLAPPBEAMLINES.MOTOR/CAMP.ATT/FPOS,'degree','FL1PPL Transmission degree (act)'
687 -FLASH.FEL/FLAPPBEAMLINES.MOTOR/CAMP.ATT/FPOS.SET,'degree','FL1PPL Transmission degree (set)'
688 -FLASH.FEL/FLAPPBEAMLINES.MOTOR/Camp_Focus_Lens/FPOS,'mm','FL1PPL Focus Mirror Stage Position (act)'
689 -FLASH.FEL/FLAPPBEAMLINES.MOTOR/Camp_Focus_Lens/FPOS.SET,'mm','FL1PPL Focus Mirror Stage Position (set)'
690 -FLASH.LASER/MODBL.FEEDFWD/BL1_Att/INPUT.Y,'%','FL1PPL Transmission rate'
691 -FLASH.SYNC/LASER.LOCK.EXP/F1.PPL.OSC/CURRENT_INPUT_JITTER.RD,'fs','FL1PPL Sync. Jitter'
692 -FLASH.SYNC/LASER.LOCK.EXP/F1.PPL.OSC/LOCK_STATUS.VALUE.RD,'au','FL1PPL Sync. Status'
693 -
694 -\\
695 -
696 -\\
697 -
698 -{{expand title="Parameters used until 2021"}}
699 699  {{code language="none"}}/FL1/Experiment/Pump probe laser/laser attenuation{{/code}}
700 700  
701 701  //always saved (PBD)//
... ... @@ -736,8 +736,7 @@
736 736  //always saved (PBD)//
737 737  DOOCS prop : {{code language="none"}}TTF2.FEL/TDOLFEL/TDOLFEL/STREAK.CAM.TIME{{/code}}
738 738  DOOCS prop : {{code language="none"}}TTF2.FEL/TDOLFEL/TDOLFEL/STREAK.CAM.TIME{{/code}}
739 -desc: delay time between the optical laser and the FEL units: ps
740 -{{/expand}}
451 +desc: delaytime between the optical laser and the FEL units: ps
741 741  
742 742  \\
743 743  
... ... @@ -747,15 +747,9 @@
747 747  
748 748  ==== User Data (FLASH1) ====
749 749  
750 -The data saved specifically for detectors at an experiment will show up in /Experiment/ there is a large number of options for cameras or monitoring of slow properties (motor positions etc) for user experiments. For details please ask your local contact.
751 -
752 -NOTE: If parameters for an experiment are included on short notice the correct naming in the HDF5 may not be in time and the data will show up in /uncategorized/ with the DOOCS names
753 -
754 -The most common and permanently installed device used by experiment are our ADCs:
755 -
756 756  ===== GHz ADCs =====
757 757  
758 -ADC traces of the (SPDevices 412) GHZ ADCs available for the users . More information about the ADCs can be found** [[here>>doc:FLASHUSER.Data Acquisition and controls.Controls (DOOCS, jDDD,\.\.\.).MTCA ADCs.WebHome]]**
463 +ADC traces of the (SPDevices 412) GHZ ADCs available for the users . More information about the ADCs can be found [[here>>doc:FLASHUSER.Data Acquisition and controls.Controls (DOOCS, jDDD,\.\.\.).MTCA ADCs.WebHome]]
759 759  //saved on DEMAND in the user DAQ//
760 760  \\The HDF5 names for the ADC traces are depending on the beamline :
761 761  \\PG Beamline:
... ... @@ -775,15 +775,17 @@
775 775  {{code language="none"}}/FL1/Experiment/BL3/ADQ412 GHz ADC/CH03/TD{{/code}}
776 776  
777 777  DOOCS prop : {{code language="none"}}FLASH.FEL/ADC.ADQ.PG/EXP1.CH00/CH00.TD  or CH00.DAQ.TD{{/code}}
778 -here the {{code language="none"}}CH00.TD{{/code}} is the full ADC trace as it is sampled ( typically several 100.000 samples per pulse train) while the {{code language="none"}}CH00.DAQ.TD{{/code}} trace only has the number of samples which are sent to the DAQ OR if //grouping// is activated the {{code language="none"}}CH00.DAQ.TD{{/code}} contains only the grouped spectra. To read the ADC trace with an online analysis program the {{code language="none"}}CH00.DAQ.TD{{/code}} is used preferably.
483 +here the {{code language="none"}}CH00.TD{{/code}} is the full ADC trace as it is sampled ( typically several 100.000 samples per pulse train) while the {{code language="none"}}CH00.DAQ.TD{{/code}} trace only has the number of samples which are sent to the DAQ OR if //grouping// is activated the {{code language="none"}}CH00.DAQ.TD{{/code}} conatins only the grouped spectra. To read the ADC trace with an online analysis program the {{code language="none"}}CH00.DAQ.TD{{/code}} is used preferablly.
779 779  DAQ channel: {{code language="none"}}FLASH.FEL/ADC.ADQ.PG/EXP1.CH00{{/code}}
780 780  
781 -In addition there are also additional parameters saved like:
486 +in addition there are also additional parameters saved like:
782 782  
783 -* {{code language="none"}}sample frequency{{/code}}: it shows the sample frequency in MHz (number of samples per µs). NOTE: the clock of the ADC is NOT synchronized to the FLASH timing system. Thus the number of samples between bunches in the bunch train may be not integer numbers which will be show up for long bunch trains.
784 -* {{code language="none"}}number of samples{{/code}}: total number of samples recorded for each 10 Hz trigger
785 -* {{code language="none"}}error (ADC):{{/code}} 0 indicates that there was no error
488 +* sample frequency (in MHz)
489 +* error (state)
490 +* offset
786 786  
492 +~|
493 +
787 787  ===== MHz ADCs =====
788 788  
789 789  similar to the GHz ADCs the MHz ADCs are saved with HDF5 names like:
... ... @@ -791,19 +791,10 @@
791 791  DOOCS prop : FLASH.FEL/ADC.SIS.BL1/EXP1.CH02/CH00.TD
792 792  DAQ channel: : FLASH.FEL/ADC.SIS.BL1/EXP1.CH02
793 793  
794 -In addition there are also additional parameters saved like:
501 +\\
795 795  
796 -* {{code language="none"}}sample frequency{{/code}}: it shows the sample frequency in MHz (number of samples per µs). NOTE: the clock of the ADC is NOT synchronized to the FLASH timing system. Thus the number of samples between bunches in the bunch train may be not integer numbers which will be show up for long bunch trains.
797 -* {{code language="none"}}number of samples{{/code}}: total number of samples recorded for each 10 Hz trigger
798 -
799 799  [[Contents>>doc:||anchor="Contents"]]
800 800  
801 -\\
802 -
803 -\\
804 -
805 -\\
806 -
807 807  === FLASH2 ===
808 808  
809 809  There is analog to FLASH1 a permanently running "PhotonDagnostic DAQ FLASH2" (PBD2) and 2 User DAQs
... ... @@ -810,12 +810,12 @@
810 810  
811 811  ==== Beamline info (FLASH2) ====
812 812  
813 -{{code language="none"}}/FL2/Beamlines/Attenuator/pressure  {{/code}}
814 -(% style="color: rgb(0,0,0);" %)//always saved (PBD2)// (%%)
815 -(% style="color: rgb(0,0,0);" %)DOOCS prop : {{code language="none"}}FLASH.FEL/ATT.GAS_DOSING/FL2.HALL/PRESSURE{{/code}} (%%)
816 -(% style="color: rgb(0,0,0);" %)DAQ channel:  {{code language="none"}}FLASH.FEL/ATT.GAS_DOSING/FL2.HALL/PRESSURE{{/code}} (%%)
817 -(% style="color: rgb(0,0,0);" %)desc: set pressure in the gas attenuator (%%)
818 -(% style="color: rgb(0,0,0);" %)units: mbar(%%)
511 +(% style="color: rgb(255,153,0);" %)(not yet available){{code language="none"}}/FL2/Beamlines/Attenuator/pressure  {{/code}}(%%)
512 +//always saved (PBD2)//
513 +DOOCS prop : {{code language="none"}}FLASH.FEL/ATT.GAS_DOSING/FL2.HALL/PRESSURE{{/code}}
514 +DAQ channel:  {{code language="none"}}FLASH.FEL/ATT.GAS_DOSING/FL2.HALL/PRESSURE{{/code}}
515 +desc: set pressure in the gas attenuator
516 +units: mbar
819 819  \\
820 820  
821 821  {{code language="none"}}/FL2/Beamlines/FL20/Shutter/open{{/code}}
... ... @@ -830,17 +830,15 @@
830 830  //always saved (PBD2)//
831 831  DOOCS prop : {{code language="none"}}FLASH.FEL/FL20H.PH.MOTOR/MOTOR1.MOT3/FPOS{{/code}}
832 832  DAQ channel: FLASH.FEL/FL20H.PH.MOTOR/MOTOR1.MOT3/FPOS
833 -desc: Position of the BL filter wheel 1 - to correlate with the filter material please look **[[here>>doc:FLASHUSER.jddd-linked help pages.Filter-Units.Filter wheels in FLASH1 and FLASH2.WebHome]]**
531 +desc: Position of the BL filter wheel 1 - to correlate with the filter material please look [[here>>doc:FLASH.Filter history (BL filterwheel 12)]]
834 834  units: degree
835 835  \\
836 836  
837 -/FL2/Beamlines/Filter wheel/position wheel 2
838 -always saved (PBD2)
839 -DOOCS prop : {{code language="none"}}FLASH.FEL/FL20H.PH.MOTOR/MOTOR2.MOT3/FPOS{{/code}}
840 -DAQ channel: {{code language="none"}}FLASH.FEL/FL20H.PH.MOTOR/MOTOR2.MOT3/FPOS{{/code}}
841 -desc: Position of the BL filter wheel 2 - to correlate with the filter material please look [[here>>doc:FLASHUSER.jddd-linked help pages.Filter-Units.Filter wheels in FLASH1 and FLASH2.WebHome]]
842 -units: degree
843 843  
536 +//always saved (PBD2)//
537 +\\\\[[here>>doc:FLASH.Filter history (BL filterwheel 12)]]
538 +{{code language="none"}}/FL2/Beamlines/Filter wheel/position wheel 2 DOOCS prop : FLASH.FEL/FL20H.PH.MOTOR/MOTOR2.MOT3/FPOS DAQ channel: FLASH.FEL/FL20H.PH.MOTOR/MOTOR2.MOT3/FPOS desc: Position of the BL filter wheel 2 - to correlate with the filter material please look units: degree{{/code}}
539 +
844 844  \\
845 845  
846 846  NOTE: Aperture positions in the beamline as well as the positions of the beam steering mirrors are also saved. for more Info contact your local contact
... ... @@ -862,37 +862,40 @@
862 862  
863 863  \\
864 864  
561 +(% style="color: rgb(255,204,0);" %)average Sigma    to be included in
562 +
563 +(% style="color: rgb(193,199,208);" %){{code language="none"}}/FL2/Photon Diagnostic/GMD/Average energy/energy tunnel uncertainty{{/code}} (%%)
564 +(% style="color: rgb(193,199,208);" %)//always saved (PBD2)// (%%)
565 +(% style="color: rgb(193,199,208);" %)DOOCS prop : FLASH.FEL/XGM.PHOTONFLUX/FL2.TUNNEL/PHOTONFLUX.UJ.SIGMA (%%)
566 +(% style="color: rgb(193,199,208);" %)DAQ channel: FLASH.FEL/XGM.PHOTONFLUX/FL2.TUNNEL/PHOTONFLUX.UJ.SIGMA (%%)
567 +(% style="color: rgb(193,199,208);" %)desc :  This parameter gives an indication of the error of the measurement of the average pulse energy. This takes signal to noise,  detector resolution, uncertainties in crossection etc into account. (it is NOT the measurement of the statistical fluctuation of the SASE pulses)(%%)
568 +(% style="color: rgb(193,199,208);" %)units : microJ
569 +
570 +\\
571 +
572 +\\
573 +
865 865  {{code language="none"}}/FL2/Photon Diagnostic/GMD/Pulse resolved energy/energy tunnel{{/code}}
866 866  //always saved (PBD2)//
867 867  DOOCS prop : {{code language="none"}}FLASH.FEL/XGM.INTENSITY/FL2.TUNNEL/INTENSITY.TD{{/code}}
868 868  DAQ channel: {{code language="none"}}FLASH.FEL/XGM.INTENSITY/FL2.TUNNEL/INTENSITY.TD{{/code}}
869 -desc : Energy per pulse measured in the Tunnel  (in front of the gas attenuator and the apertures in the Hall) In addition measurement errors and beam position are included for EACH pulse in the pulse train  !! (see below)
870 -units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision)** [[see here for help>>doc:FLASHUSER.jddd-linked help pages.Calibrating the pulse resolved (electron) data from GMD.WebHome]]**
578 +desc : Energy per pulse measured in the Tunnel  (in fromt of the gas attenuator and the apertures in the Hall)
579 +units : a.u. (more or less µJ but need to be calibrated with the "Average energy" for good precision) [[see here for help>>doc:FLASH.Calibrating the pulse resolved (electron) data from GMD]]
871 871  
872 -{{info title="GMD pulse resolved data structure"}}
873 -For every pulse in the pulse train the information is saved:
874 -
581 +\\
875 875  
876 -1. **Intensity per pulse** (a.u. (more or less µJ ))
877 -1. Intensity per pulse (auxillary GMD) - not used
878 -1. Position horizontal (mm, for a single pulse the position information may be very noisy  - talk to your local contact)
879 -1. Position vertical (mm, for a single pulse the position information may be very noisy  - talk to your local contact)
880 -1. **Intensity per pulse sigma** (a.u. (more or less µJ ), (% style="color: rgb(0,0,0);" %)This parameter gives an indication of the error of the measurement of the pulse energy. This takes signal to noise,  detector resolution, uncertainties in crossection etc into account. (it is NOT the measurement of the statistical fluctuation of the SASE pulses)(%%))
881 -1. Position horizontal sigma  (mm, indicates the error (RMS, sigma) of the measurement according to known uncertainties and signal to noise)
882 -1. Position vertical sigma  (mm, indicates the error (RMS, sigma) of the measurement according to known uncertainties and signal to noise)
883 -1. Combined warning and error flags
583 +\\
884 884  
885 -The pulse energy and the error are plotted for the first bunch of the pulse trains saved in this 
886 -file
585 +{{code language="none"}}/FL2/Photon Diagnostic/GMD/Pulse resolved energy/energy tunnel uncertainty (sigma){{/code}}
586 +//always saved (PBD2)//
587 +DOOCS prop : {{code language="none"}}FLASH.FEL/XGM.INTENSITY/FL2.TUNNEL/INTENSITY.SIGMA.TD{{/code}}
588 +DAQ channel: {{code language="none"}}FLASH.FEL/XGM.INTENSITY/FL2.TUNNEL:4{{/code}}
589 +desc :(% style="color: rgb(0,0,0);" %)This parameter gives an indication of the error of the measurement of the pulse energy. This takes signal to noise,  detector resolution, uncertainties in crossection etc into account. (it is NOT the measurement of the statistical fluctuation of the SASE pulses)(%%)
590 +units : a.u. (more or less µJ - related to the value of the pulse energy )
887 887  
888 -
889 -[[image:attach:image2021-2-9_10-51-6.png||height="250"]]
890 890  
891 -\\
892 -{{/info}}
593 +{{code language="none"}}{{/code}}
893 893  
894 -\\
895 -
896 896  All values for the GMD are also available for the** HALL GMD **which is located in the experimental hall down stream the gas attenuator. If the attenuator is on the ratio between Hall and Tunnel signal shows the attenuation. **BUT NOTE** that the filter unit and the Aperture 4 are downstream the GMD. So if filters and aperture are used this influence is NOT measured by the GMD hall !
897 897  
898 898  \\
... ... @@ -905,7 +905,7 @@
905 905  //always saved (PBD2)//
906 906  DOOCS prop : {{code language="none"}}FLASH.FEL/XGM.POSMON/FL2.TUNNEL/IX.POS{{/code}}
907 907  DAQ channel: {{code language="none"}}FLASH.FEL/XGM.POSMON/FL2.TUNNEL/IX.POS{{/code}}
908 -desc : the Average ( ~~ 20 sec averaging time ) Beam position of the photon Beam determined by the GMD (tunnel, x=horizontal)
607 +desc : the Average ( ~~ 20 sec averaging time ) Beam position of the photon Beam determined by the [[GMD>>doc:FLASH.Gas Monitor Detector]] (tunnel, x=horizontal)
909 909  units : mm
910 910  
911 911  \\
... ... @@ -914,20 +914,20 @@
914 914  //always saved (PBD2)//
915 915  DOOCS prop : {{code language="none"}}FLASH.FEL/XGM.POSMON/FL2.TUNNEL/IY.POS{{/code}}
916 916  DAQ channel: {{code language="none"}}FLASH.FEL/XGM.POSMON/FL2.TUNNEL/IY.POS{{/code}}
917 -desc : the Average ( ~~ 20 sec averaging time ) Beam position of the photon Beam determined by the GMD (tunnel, x=horizontal)
616 +desc : the Average ( ~~ 20 sec averaging time ) Beam position of the photon Beam determined by the [[GMD>>doc:FLASH.Gas Monitor Detector]] (tunnel, x=horizontal)
918 918  units : mm
919 919  
920 920  \\
921 921  
922 -/FL2/Photon Diagnostic/GMD/Pulse resolved beam position/position tunnel x
923 -always saved (PBD2)
924 -DOOCS prop : FLASH.FEL/XGM.BPM/FL2.HALL/X.TD
925 -DAQ channel: FLASH.FEL/XGM.BPM/FL2.HALL:2
926 -desc: Besides the well calibrated averaged beam position information there is also the option to measure the beam position on a single bunch level. HOWEVER this methide needs a perfectly adjusted signal level (talk to your local contact !!) and also then the signal to noise is rather small and one needs some averaging ... BUT with this option one can determine if there was a spatial slope on a burst (say forst bunches were lower than the last ones or so ...)
927 -units : mm   
621 +\\
928 928  
929 -(x=horizontal, y = vertial)
930 930  
624 +//always saved (PBD2)//
625 +\\\\{{code language="none"}}/FL2/Photon Diagnostic/GMD/Pulse resolved beam position/position tunnel x DOOCS prop : FLASH.FEL/XGM.BPM/FL2.HALL/X.TDDAQ channel: FLASH.FEL/XGM.BPM/FL2.HALL:2 desc: {{/code}}Besides the well calibrated averaged beam position information there is also the option
626 +{{code language="none"}}to measure the beam position on a single bunch level. HOWEVER this methide needs a perfectly adjusted signal level (talk to your local contact !!) and also then the signal to noise is rather small and one needs some averaging ... BUT with this option one can determine if there was a spatial slope on a burst (say forst bunches were lower than the last ones or so ...)units : mm    {{/code}}
627 +
628 +{{code language="none"}}(x=horizontal, y = vertial){{/code}}
629 +
931 931  again the same parameter set is available for the **HALL GMD**
932 932  
933 933  \\
... ... @@ -934,9 +934,9 @@
934 934  
935 935  \\
936 936  
937 -==== Photon Diagnostics OPIS[[ >>url:http://photon-science.desy.de/facilities/flash/photon_diagnostics/opis_spectrometer/index_eng.html||shape="rect"]](FLASH2) ====
636 +==== Photon Diagnostics OPIS[[ >>url:http://photon-science.desy.de/facilities/flash/photon_diagnostics/opis_spectrometer/index_eng.html||shape="rect"]](FLASH2) ====
938 938  
939 -for more info see:** [[ OPIS>>url:http://photon-science.desy.de/facilities/flash/photon_diagnostics/opis_spectrometer/index_eng.html||shape="rect"]]**
638 +for more info see: [[ OPIS>>url:http://photon-science.desy.de/facilities/flash/photon_diagnostics/opis_spectrometer/index_eng.html||shape="rect"]]
940 940  
941 941  (The OPIS hall is not installed yet ...)
942 942  
... ... @@ -955,7 +955,7 @@
955 955  // saved opon request (PBD2)//
956 956  DOOCS prop : {{code language="none"}}FLASH.UTIL/STORE/FL2.TUNNEL.OPIS/VAL040{{/code}}
957 957  DAQ channel:{{code language="none"}} FLASH.UTIL/STORE/FL2.TUNNEL.OPIS/VAL040{{/code}}
958 -desc : mean wavelength ( ~~ 1 sec averaging time ) measured in the TUNNEL for a specific bunch out of the bunch train (via photoelectron spectroscopy)
657 +desc : meanwavelength ( ~~ 1 sec averaging time ) measured in the TUNNEL for a specific bunch out of the bunch train (via photoelectron spectroscopy)
959 959  units : nm
960 960  
961 961  \\
... ... @@ -969,236 +969,121 @@
969 969  
970 970  \\
971 971  
972 -If Opis is running typically on the the averaged data is saved. For several experiments it may make sense to save the information for each single bunch. This is up to now done by saving the complete ADC trace of the TOF setup. This is a huge amount of data and needs processing. This has to be performed after the beamtime in close contact to [[Markus Braune>>mailto:markus.braune@desy.de||shape="rect"]] ( responsible for [[OPIS>>url:http://photon-science.desy.de/facilities/flash/photon_diagnostics/opis_spectrometer/index_eng.html||shape="rect"]])
671 +If Opis is running typically on the the averaged data is saved. For several experiments it may make sense to save the information for each single bunch. This is up to now done by savng the compleate ADC trace of the TOF setup. This is a huge amount of data and needs processing. This has to be performed after the beamtime in close contact to [[Markus Braune>>mailto:markus.braune@desy.de||shape="rect"]] ( respobsible for [[OPIS>>url:http://photon-science.desy.de/facilities/flash/photon_diagnostics/opis_spectrometer/index_eng.html||shape="rect"]])
973 973  
974 974  \\
975 975  
976 -In case OPIS was not operating there is still information about the **set wavelength** for the undulators (see below) which may differ by up to 5 % from the actual wavelength due to different settings in the FEL ...
675 +In case OPIS was not operating there is still informaton about the set wavelength for the undulators (see below) which may differ by up to 5 % from the actual wavelength due to different settings in the FEL ...
977 977  
978 978  \\
979 979  
980 980  \\
981 981  
681 +\\
682 +
982 982  ==== Electron Beam properties (FLASH2) ====
983 983  
984 984  ===== bunch charge =====
985 985  
986 986  {{code language="none"}}/FL2/Electron Diagnostic/Bunch charge/after undulator{{/code}}
987 -//always saved (PBD2)//
688 +//always saved (PBD)//
988 988  DOOCS prop : {{code language="none"}}FLASH.DIAG/PBD2.TOROID.ML/9FL2BURN/CHARGE.FLASH2{{/code}}
989 989  DAQ channel: {{code language="none"}}FLASH.DIAG/PBD2.TOROID.ML/9FL2BURN/CHARGE.FLASH2{{/code}}
990 -desc: electron bunch charge FLASH2 (average value for each bunchtrain).
691 +desc: electron bunch charge (FLASH2)
991 991  units: nC
992 992  
993 993  \\
994 994  
995 -===== electron bunch energy =====
996 -
997 -{{code language="none"}}/FL2/Electron Diagnostic/Electron energy/energy of first bunch/behind undulators{{/code}}
998 -//always saved (PBD2)//
999 -DOOCS prop : {{code language="none"}}FLASH.DIAG/BEAM_ENERGY_MEASUREMENT/FL2XTDS/ENERGY.FLASH2{{/code}}
1000 -DAQ channel: (% style="color: rgb(94,108,132);" %)TTF2.DAQ/PBD2.BEAM.ENERGY.MEAS.ML.COPY/FL2XTDS.ENERGY.FLASH2{{code language="none"}}{{/code}}(%%)
1001 -desc: electron bunch energy measured behind the undulator. Data is saved with 10 Hz - BUT (for computation reasons) only the energy of the FIRST bunch is recorded. The data is also available for (% style="color: rgb(94,108,132);" %)extraction and septum  in the beginning of FLASH2
1002 -
1003 -(% style="letter-spacing: 0.0px;" %)units: (% class="twikiNewLink" %)MeV
1004 -
1005 1005  \\
1006 1006  
1007 -(% style="color: rgb(94,108,132);font-weight: 600;letter-spacing: 0.0px;" %)
1008 -undulator settings
698 +(% class="wrapped" %)
699 +|(((
700 +FLASH.UTIL/FL2.UND.MOTOR/FL2SASE14/GAP
701 +)))|(((
702 +/FL2/Electron Diagnostic/Undulator setting/SASE14 gap
703 +)))
704 +|(((
705 +TTF2.FEEDBACK/FL2.WAVELENGTHCONTROL/FLASH2/WAVELENGTH
706 +)))|(((
707 +/FL2/Electron Diagnostic/Undulator setting/set wavelength
708 +)))
1009 1009  
1010 -{{code language="none"}}/FL2/Electron Diagnostic/Undulator setting/set wavelength{{/code}}
1011 -//always saved (PBD2)//
1012 -DOOCS prop : {{code language="none"}}TTF2.FEEDBACK/FL2.WAVELENGTHCONTROL/FLASH2/WAVELENGTH{{/code}}
1013 -DAQ channel:  {{code language="none"}}TTF2.FEEDBACK/FL2.WAVELENGTHCONTROL/FLASH2/WAVELENGTH{{/code}}
1014 -desc: Set value for the anticipated wavelength . This parameter is used to set the undulator gap. It may however deviate from the actual wavelength by several % ...
1015 -units: nm
1016 -
1017 -{{code language="none"}}/FL2/Electron Diagnostic/Undulator setting/SASE14 gap{{/code}}
1018 -//always saved (PBD2)//
1019 -DOOCS prop : {{code language="none"}}FLASH.UTIL/FL2.UND.MOTOR/FL2SASE14/GAP{{/code}}
1020 -DAQ channel:  {{code language="none"}}FLASH.UTIL/FL2.UND.MOTOR/FL2SASE14/GAP{{/code}}
1021 -desc: gap value of the undulators. This can be used to follow up how many undulators were closed and if there was a taper
1022 -units: mm
1023 -
1024 -The gap values are saved for all 12 undulators (Nr 3 to 14). Undulator 14 is the one closest to the experimental hall.
1025 -
1026 1026  =====
1027 -arrival time (BAM) =====
711 +arrival time =====
1028 1028  
1029 -{{info title="BAM information: updates 2022"}}
1030 -* see: [[Info collection about the BAMs and how to use the BAM data>>url:https://confluence.desy.de/display/FLASHUSER/Info+collection+for+the+BAM||shape="rect"]]
1031 -* The data format of the BAM has been completely altered in the 2022 shutdown
1032 -* before 2022 BAMs were always saving the arrival time information for each 1µs bucked regardless if there were electrons in the accelerator or not. I addition the arrival times for  FL1 and FL2 were saved in the same parameter ...
1033 -* THIS is now different. There are new parameters saving only the arrival times for pulses that go to FL1 and to FL2 (in detail: first time slot of the accelerator and second)
1034 -* There has been also a renaming  (and relocation) of the BAMs.
1035 -** acc:  4DBC3 → FL0.DBC2
1036 -** FL1: 1SFELC →  FL1.SFELC
1037 -** FL2: 8FL2XTDS → (% style="color: rgb(23,43,77);" %)FL2.SEED5
1038 -* for more Info: [[LINK to detailed infos from MSK>>url:https://confluence.desy.de/display/SDiagPublic/BAM+Data+Structure||shape="rect"]]
1039 -* [[Link a collection of papers related to the BAM and the analysis of pump-probe experiments>>doc:FLASHUSER.Additional helpful things.FLASH beamlines and instruments references.WebHome]]
1040 -* a recent  [[talk about the working principle of the BAM>>attach:BAM-basics and outlook-2018_DESY-template_16-9Format.pdf]]
1041 -{{/info}}
1042 -
1043 -\\
1044 -
1045 -{{expand title="Discontinued BAM format (used until end 2021)"}}
1046 -(% style="color: rgb(0,0,0);" %)**Discontinued BAM data recording **
1047 -
1048 -{{code language="none"}}/FL2/Electron Diagnostic/BAM/8FL2XTDS/electron bunch arrival time (low charge){{/code}}
1049 -//always saved (PBD2)//
1050 -DOOCS prop : {{code language="none"}}FLASH.SDIAG/BAM/8FL2XTDS/LOW_CHARGE_ARRIVAL_TIME{{/code}}
1051 -DAQ channel: {{code language="none"}}FLASH.SDIAG/BAM.DAQ/8FL2XTDS.LOW_CHARGE_ARRIVAL_TIME{{/code}}
1052 -desc: Electron bunch arrival time measured with the BAM after the FLASH2 undulator (pulse resolved data)
1053 -units: ps (bigger numbers indicate later arrivaltime of the electrons)
1054 -
1055 -**FL1**{{code language="none"}}//Electron Diagnostic/BAM/4DBC3/electron bunch arrival time (low charge){{/code}}
1056 -//always saved (PBD2)//
713 +{{code language="none"}}/FL1/Electron Diagnostic/BAM/4DBC3/electron bunch arrival time (low charge){{/code}}
714 +//always saved (PBD)//
1057 1057  DOOCS prop : {{code language="none"}}FLASH.SDIAG/BAM/4DBC3/LOW_CHARGE_ARRIVAL_TIME{{/code}}
1058 1058  DAQ channel: {{code language="none"}}FLASH.SDIAG/BAM.DAQ/4DBC3.LOW_CHARGE_ARRIVAL_TIME{{/code}}
1059 -desc: Electron bunch arrival time measured with the BAM  in the accelerator  (pulse resolved data)
1060 -units: ps (bigger numbers indicate later arrivaltime of the electrons)
717 +desc: Electron bunch arrival time measured with the BAM (more or less) before the undulator (pulse resolved data)
718 +units: ps (bigger numbers indicate later arrivaltime of the electrons)
719 +note: besides the arivaltime from FLASH1 there is also the FLASH2/3 electron arrival time saved. [[LINK to detailled infos from MSK (may only work inside DESY network~[~[image:url:http://hasfweb.desy.de/pub/TWiki/TWikiDocGraphics/external-link.gif~|~|width="13" height="12"~]~]>>url:http://www.desy.de/~~mbock/pages/BAM_daq_channel_descriptions.html||shape="rect"]] and to a recent  [[talk about the working principle of the BAM>>url:https://confluence.desy.de/download/attachments/134216957/BAM-basics_and_outlook-2018_DESY-template_16-9Format.pdf?version=1&modificationDate=1565162143328&api=v2||shape="rect"]]
1061 1061  
1062 1062  \\
1063 1063  
1064 -{{info title="BAM hints"}}
1065 -* The BAM 4DBC3 measures the arrivaltime of** FLASH 1 and FLASH2** in the same data set (thus also sorted in at /FL1/ !).
1066 -* The BAM 8FL2XTDS measures only for FLASH2 BUT has the same data structure as the other BAMS ... thus there are also (random) values in in the  FLASH1 time slot 
1067 -** Structure: The first values are for FLASH1 bunches. After a gap of about 70 micros ( 70 colums)  with  as entry for the switching between FLASH 1 and 2 the values for the electrons used in FLASH2 start.  The start time of FLASH2 is also recorded in the DAQ. FLASH1 start time is for historic reasons 700. thus if e.g. the start time of FLASH2 ( property name see below) is 1200 it means that FLASH starts at column 500 (1200-700) ... .In case of doubt ask your local contact
1068 -* [[Link a collection of papers related to the BAM and the analysis of pump-probe experiments >>doc:FLASHUSER.Additional helpful things.FLASH beamlines and instruments references.WebHome]]
1069 -* [[LINK to detailed infos from MSK (may only work inside DESY network~[~[image:url:http://hasfweb.desy.de/pub/TWiki/TWikiDocGraphics/external-link.gif~|~|width="13" height="12"~]~]>>url:http://www.desy.de/~~mbock/pages/BAM_daq_channel_descriptions.html||shape="rect"]]
1070 -* a recent  [[talk about the working principle of the BAM>>attach:BAM-basics and outlook-2018_DESY-template_16-9Format.pdf]]
1071 -{{/info}}
1072 -{{/expand}}
1073 -
1074 1074  \\
1075 1075  
1076 -====== **BAM FL0.DBC2**{{code language="none"}}{{/code}} ======
1077 -
1078 -(% style="color: rgb(255,102,0);" %)**DBC2**/electron bunch arrival time  (HDF5 name not yet implemented - see zraw){{code language="none"}}/FL2/Electron Diagnostic/BAM/{{/code}}
1079 -
1080 -{{code language="none"}}/zraw/FLASH.SDIAG/BAM.DAQ/FL0.DBC2.ARRIVAL_TIME.ABSOLUTE.SA2.COMP/dGroup/{{/code}}
1081 -
1082 -//always saved (PBD)//
1083 -**FL0.DBC2**
1084 -(% style="color: rgb(0,0,0);" %)channel: FLASH.SDIAG/BAM/**FL0.DBC2**/ARRIVAL_TIME.ABSOLUTE.SA2.COMP
1085 -{{code language="none"}} DOOCS prop : FLASH.SDIAG/BAM//ARRIVAL_TIME.ABSOLUTE.SA2.COMPDAQ {{/code}}(% style="letter-spacing: 0.0px;" %)desc: Electron bunch arrival time measured with the BAM inside the accelerator (after bunch compressor 2). The property contains only the arrival time of the bunches sent to FL2 (e.g. if there are 30 bunches in FL2 the first 30 values are the arrival time the remaining numbers still may have arbitrary numbers looking like a signal which they are not0). These are the same values as the "raw" data below - just "cleaned". The values show a very good correlation to the arrival time  of the XUV pulses in the experiment (see help).
1086 -units: fs (bigger numbers (typically) indicate later arrival times of the electrons).
1087 -
1088 1088  \\
1089 1089  
1090 -(% style="color: rgb(255,102,0);" %)DBC2/electron bunch arrival time (raw)  (HDF5 name not yet implemented - see zraw){{code language="none"}}/FL2/Electron Diagnostic/BAM/{{/code}}
727 +===== electron bunch energy =====
1091 1091  
1092 -{{code language="none"}}/zraw/FLASH.SDIAG/BAM.DAQ/FL0.DBC2.ARRIVAL_TIME.ABSOLUTE.SA2/dGroup/{{/code}}
1093 -//always saved (PBD)//
1094 -{{code language="none"}}DOOCS prop : FLASH.SDIAG/BAM/FL0.DBC2/ARRIVAL_TIME.ABSOLUTE{{/code}}
1095 -(% style="color: rgb(0,0,0);" %)FLASH.SDIAG/BAM/FL0.DBC2/ARRIVAL_TIME.ABSOLUTE {{code language="none"}}DAQ channel: {{/code}}(%%)
1096 -desc: Electron bunch arrival time measured with the BAM inside the accelerator (after bunch compressor 2). Here the complete bunch train from the FEL is recorded (FLASH1 and FLASH2 pulses). Thus there are values from FLASH 2 in the second part. they may be separated by several "0" values if the reprate is different from 1 MHz ...  - It shows a very good correlation to the arrival time  of the XUV pulses in the experiment (see help). 
1097 -units: fs (bigger numbers (typically) indicate later arrival times of the electrons).
1098 -
729 +{{code language="none"}}/FL1/Electron Diagnostic/Electron energy/average electron energy{{/code}}
730 +_always saved (PBD)
731 +DOOCS prop : {{code language="none"}}TTF2.DAQ/ENERGY.DOGLEG/E_INTRA_MEAN/VAL{{/code}}
732 +DAQ channel: {{code language="none"}}PBD.ENERGY.DOGLEG/E_MEAN{{/code}}
733 +desc: electron bunch energy (average over the bunch train)
734 +units: (% class="twikiNewLink" %)MeV(%%)
1099 1099  \\
1100 1100  
1101 -(% style="color: rgb(255,102,0);" %)DBC2/error (HDF5 name not yet implemented - see zraw){{code language="none"}}/FL2/Electron Diagnostic/BAM/{{/code}}(%%)
1102 -//always saved (PBD)//
1103 -(% style="color: rgb(0,0,0);" %)E.bamError{{code language="none"}}DOOCS prop : FLASH.SDIAG/BAM/FL0.DBC2/ARRIVAL_TIM{{/code}}(%%)
1104 -(% style="color: rgb(0,0,0);" %)FLASH.SDIAG/BAM/FL0.DBC2/ARRIVAL_TIME.BAMERROR{{code language="none"}}DAQ channel: {{/code}}(%%)
1105 -desc: If the value is 0 , the BAM is working well. If it is non-zero there is a problem !!
737 +{{code language="none"}}/FL1/Electron Diagnostic/Electron energy/pulse resolved energy{{/code}}
738 +_always saved (PBD)
739 +DOOCS prop : {{code language="none"}}TTF2.DAQ/ENERGY.DOGLEG/E_SPECT/VAL.TD{{/code}}
740 +DAQ channel: {{code language="none"}}PBD.ENERGY.DOGLEG/E_SPECT{{/code}}
741 +desc: electron bunch energy bunch resolved
742 +units: (% class="twikiNewLink" %)MeV
1106 1106  
1107 1107  \\
1108 1108  
1109 -(% style="color: rgb(255,102,0);" %)DBC2/status  (HDF5 name not yet implemented - see zraw){{code language="none"}}/FL2/Electron Diagnostic/BAM/{{/code}}(%%)
1110 -//always saved (PBD)//
1111 -(% style="color: rgb(0,0,0);" %)E..bamStatus.//2//{{code language="none"}}DOOCS prop : FLASH.SDIAG/BAM/FL0.DBC2/ARRIVAL_TIM{{/code}}(%%)
1112 -(% style="color: rgb(0,0,0);" %): FLASH.SDIAG/BAM/FL0.DBC2/ARRIVAL_TIME.BAMSTATUS.2{{code language="none"}}DAQ channel{{/code}}(%%)
1113 -desc: status bit: 0 - data is valid; 1 - beam present; 2 - calibration ongoing; 3 - feedback enabled; 4 - feedback acting;  mostly check for bit 0 == 1 is sufficient
1114 -
746 +{{code language="none"}}/FL1/Electron Diagnostic/Electron energy/wavelength bunch train average{{/code}}
747 +_always saved (PBD)
748 +DOOCS prop : {{code language="none"}}TTF2.DAQ/ENERGY.DOGLEG/LAMBDA_MEAN/VAL{{/code}}
749 +DAQ channel: {{code language="none"}}PBD.ENERGY.DOGLEG/LAMBDA_MEAN{{/code}}
750 +desc: Wavelength calculated by the electron bunch energy (average over the bunch train) (FLASH1)
751 +units: nm
1115 1115  \\
1116 1116  
1117 -====== **BAM FL2.SEED5**{{code language="none"}}{{/code}} ======
1118 -
1119 -/FL2/Electron Diagnostic/BAM/**SEED5**(% style="color: rgb(255,102,0);" %)/electron bunch arrival time  (HDF5 name not yet implemented - see zraw)
1120 -
1121 -(% style="color: rgb(0,0,0);" %){{code language="none"}}/zraw/FLASH.SDIAG/BAM.DAQ/FL0.SEED5.ARRIVAL_TIME.ABSOLUTE.SA2.COMP/dGroup/{{/code}}
1122 -
1123 -//always saved (PBD)//
1124 -(% style="color: rgb(23,43,77);" %)**FL2.SEED5**(%%)
1125 -(% style="color: rgb(0,0,0);" %)channel: FLASH.SDIAG/BAM/(% style="color: rgb(0, 0, 0); color: rgb(23, 43, 77)" %)**FL2.SEED5**(% style="color: rgb(0,0,0);" %)/ARRIVAL_TIME.ABSOLUTE.SA1.COMP
1126 -{{code language="none"}} DOOCS prop : FLASH.SDIAG/BAM//ARRIVAL_TIME.ABSOLUTE.SA1.COMPDAQ {{/code}}(%%)desc: Electron bunch arrival time measured  with the BAM  before the undulator (pulse resolved data). This one was newly installed in 2020.. The property contains only the arrival time of the bunches sent to FL2 (e.g. if there are 30 bunches in FL2 the first 30 values are the arrival time the remaining numbers still may have arbitrary numbers looking like a signal which they are not). These are the same values as the "raw" data below - just "cleaned". The values show a very good correlation to the arrival time  of the XUV pulses in the experiment (see help).
1127 -units: fs (bigger numbers (typically) indicate later arrival times of the electrons).
1128 -
1129 -\\
1130 -
1131 -\\
1132 -
1133 -(% style="color: rgb(23,43,77);" %)SEED5(% style="color: rgb(255,102,0);" %)/electron bunch arrival time (raw) (HDF5 name not yet implemented - see zraw){{code language="none"}}/FL2/Electron Diagnostic/BAM/{{/code}}
1134 -
1135 -(% style="color: rgb(0,0,0);" %){{code language="none"}}/zraw/FLASH.SDIAG/BAM.DAQ/FL0.SEED5.ARRIVAL_TIME.ABSOLUTE.SA2/dGroup/{{/code}}(%%)
1136 -//always saved (PBD)//
1137 -(% style="color: rgb(23,43,77);" %)**FL2.SEED5**{{code language="none"}}DOOCS prop : FLASH.SDIAG/BAM//ARRIVAL_TIME.ABSOLUTE{{/code}}(%%)
1138 -**~ **(% style="color: rgb(0,0,0);" %)FLASH.SDIAG/BAM/(% style="color: rgb(0, 0, 0); color: rgb(23, 43, 77)" %)**FL2.SEED5**(% style="color: rgb(0,0,0);" %)/ARRIVAL_TIME.ABSOLUTE {{code language="none"}}DAQ channel:{{/code}}(%%)
1139 -desc: Electron bunch arrival time measured  with the BAM  before the undulator (pulse resolved data). This one was newly installed in 2020. Here the complete bunch train from the FEL is recorded (FLASH1 and FLASH2 pulses). Thus there are values from FLASH 2 in the second part. they may be separated by several "0" values if the reprate is different from 1 MHz ...  - It shows a very good correlation to the arrival time  of the XUV pulses in the experiment (see help). 
1140 -units: fs (bigger numbers (typically) indicate later arrival times of the electrons).
1141 -
1142 -\\
1143 -
1144 -(% style="color: rgb(23,43,77);" %)SEED5(% style="color: rgb(255,102,0);" %)/error (HDF5 name not yet implemented - see zraw){{code language="none"}}/FL2/Electron Diagnostic/BAM/{{/code}}(%%)
1145 -//always saved (PBD)//
1146 -(% style="color: rgb(23,43,77);" %)**FL2.SEED5**(% style="color: rgb(0,0,0);" %)E.bamError{{code language="none"}}DOOCS prop : FLASH.SDIAG/BAM//ARRIVAL_TIM{{/code}}(%%)
1147 -(% style="color: rgb(0,0,0);" %): FLASH.SDIAG/BAM/(% style="color: rgb(0, 0, 0); color: rgb(23, 43, 77)" %)**FL2.SEED5**(% style="color: rgb(0,0,0);" %)/ARRIVAL_TIME.BAMERROR{{code language="none"}}DAQ channel{{/code}}(%%)
1148 -desc: If the value is 0 , the BAM is working well. If it is non-zero there is a problem !!
1149 -
1150 -\\
1151 -
1152 -(% style="color: rgb(23,43,77);" %)SEED5(% style="color: rgb(255,102,0);" %)/status  (HDF5 name not yet implemented - see zraw){{code language="none"}}/FL2/Electron Diagnostic/BAM/{{/code}}(%%)
1153 -//always saved (PBD)//
1154 -(% style="color: rgb(23,43,77);" %)**FL2.SEED5**(% style="color: rgb(0,0,0);" %)E.bamStatus.//2//{{code language="none"}}DOOCS prop : FLASH.SDIAG/BAM//ARRIVAL_TIM{{/code}}(%%)
1155 -(% style="color: rgb(0,0,0);" %)el: FLASH.SDIAG/BAM/(% style="color: rgb(0, 0, 0); color: rgb(23, 43, 77)" %)**FL2.SEED5**(% style="color: rgb(0,0,0);" %)/ARRIVAL_TIME.BAMSTATUS.2{{code language="none"}}DAQ chann{{/code}}(%%)
1156 -desc: status bit: 0 - data is valid; 1 - beam present; 2 - calibration ongoing; 3 - feedback enabled; 4 - feedback acting;  mostly check for bit 0 == 1 is sufficient
1157 -
1158 -\\
1159 -
1160 1160  [[Contents>>doc:||anchor="Contents"]]
1161 1161  
1162 1162  \\
1163 1163  
1164 -==== Timing information, rep rate etc.  (FLASH2) ====
758 +==== Timing information, rep rate etc.  (FLASH1) ====
1165 1165  
1166 -===== start time of FLASH2 =====
1167 -
1168 -{{code language="none"}}/FL2/Timing/start time flash2{{/code}}
1169 -//always saved (PBD2)//
1170 -DOOCS prop : {{code language="none"}}FLASH.DIAG/TIMER/FLASHCPUTIME1.0/BUNCH_POSITION.2{{/code}}
1171 -DAQ channel: {{code language="none"}}FLASH.DIAG/TIMER/FLASHCPUTIME1.0/BUNCH_POSITION.2{{/code}}
1172 -desc: The max 600 µs acceleration time of FLASH is devided between FLASH1 and FLASH2. This 600 µs window starts with FLASH1 (up to now)  at a time"label" of 700 µs (for historic reasons). Thus the first bunch of FLASH 1 comes at "700" and the last possibel bunch comes at 1300 (700+600). After FLASH1 train is over ther is a about 70µs switching time with no bunches. Then comes the first FLASH2 bunch.  Thus if e.g. the start time of FLASH2 is 1200 it means that FLASH2 starts at column 500 (1200-700)  in the HDF5 files. (However for yet unknown reasons this may change by 2-3 colums ...)
1173 -units: µs
1174 -
1175 1175  ===== bunch repetition rate =====
1176 1176  
1177 -{{code language="none"}}/FL2/Timing/repetition rate{{/code}}
1178 -//always saved (PBD2)//
1179 -DOOCS prop : {{code language="none"}}FLASH.DIAG/TIMER/FLASHCPUTIME1.0/REP_RATE_KHZ.2{{/code}}
1180 -DAQ channel: {{code language="none"}}FLASH.DIAG/TIMER/FLASHCPUTIME1.0/REP_RATE_KHZ.2{{/code}}
1181 -desc: repetition rate of the bunches / pulses within the burst (FLASH2)
762 +{{code language="none"}}/FL1/Timing/repetition rate{{/code}}
763 +//always saved (PBD)//
764 +DOOCS prop : {{code language="none"}}FLASH.DIAG/TIMER/FLASHCPUTIME1.0/REP_RATE_KHZ.1{{/code}}
765 +DAQ channel: {{code language="none"}}TTF2.UTIL/LASER.CONTROL/GUN/PULSE_FREQ{{/code}}
766 +desc: repetition rate of the bunches / pulses within the burst (FLASH1)
1182 1182  units: kHz
1183 -
1184 1184  \\
1185 1185  
1186 1186  ===== set number of pulses =====
1187 1187  
1188 -(% style="color: rgb(255, 0, 0); color: rgb(255, 102, 0)" %)(HDF5 name not yet implemented - see zraw)(% style="color: rgb(255,0,0);" %){{code language="none"}}/FL2/Timing/set number of bunches {{/code}}(%%)
1189 -//always saved (PBD2)//
1190 -DOOCS prop : {{code language="none"}}FLASH.DIAG/TIMINGINFO/TIME1.BUNCH_FIRST_INDEX.2 [4th number]{{/code}}
1191 -DAQ channel: {{code language="none"}}FLASH.DIAG/TIMINGINFO/TIME1.BUNCH_FIRST_INDEX.2 [4th number]{{/code}}
1192 -desc: Number of bunches set in the control (timing) system.  The property contains 4 numbers. the last one is the number of pulses (see also [[doc:FLASH.Timing properties]] (internal link)).  If pulses are used for diagnostic of the protection system of the accelerator limits the number of bunches to be accelerated and thus the actual number of pulses may be smaller than the set one 
772 +{{code language="none"}}/FL1/Timing/set number of bunches{{/code}}
773 +//always saved (PBD)//
774 +DOOCS prop : {{code language="none"}}FLASH.DIAG/TOROID.ML/3GUN/NUMBEROFBUNCHES.FLASH1{{/code}}
775 +DAQ channel: {{code language="none"}}TTF2.UTIL/LASER.CONTROL/GUN/PULSE_NUM{{/code}}
776 +desc: Number of pulses set at the gun (FLASH1)
1193 1193  units:
1194 1194  
1195 1195  ===== actual number of pulses =====
1196 1196  
1197 1197  {{code language="none"}}/FL1/Timing/actual number of bunches{{/code}}
1198 -//always saved (PBD2)//
1199 -DOOCS prop : {{code language="none"}}FLASH.DIAG/PBD2.TOROID.ML/3GUN/NUMBEROFBUNCHES.FLASH2{{/code}}
1200 -DAQ channel: {{code language="none"}}FLASH.DIAG/PBD2.TOROID.ML/3GUN/NUMBEROFBUNCHES.FLASH2{{/code}}
1201 -desc: Number of bunches measured BEHIND the undulator. If pulses are used for diagnostic of the protection system of the accelerator limits the number of bunches to be accelerated this is the actual number that created XUV radiation.The number is calculated by the DAQ middle layer server, (FLASH2)
782 +//always saved (PBD)//
783 +DOOCS prop : {{code language="none"}}FLASH.DIAG/TOROID.ML/12EXP/NUMBEROFBUNCHES.FLASH1{{/code}}
784 +DAQ channel: {{code language="none"}}TTF2.DIAG/PBD.TOROID.ML/12EXP{{/code}}
785 +desc: Number of bunches measured BEHIND the undulator. If pulses are used for diagnostic of the protection system of the accelerator limits the number of bunches to be accelerated this is the actual number that created XUV radiation.The number is calculated by the DAQ middle layer server, (FLASH1)
1202 1202  units:
1203 1203  \\
1204 1204  
... ... @@ -1205,10 +1205,10 @@
1205 1205  ===== actual pulse pattern recorded after the undulator =====
1206 1206  
1207 1207  {{code language="none"}}/FL1/Timing/Bunch pattern/pattern after undulator{{/code}}
1208 -//always saved (PBD2)//
1209 -DOOCS prop : {{code language="none"}}FLASH.DIAG/PBD2.TOROID.ML/9FL2BURN.PULSEPATTERN{{/code}}
1210 -DAQ channel: {{code language="none"}}FLASH.DIAG/PBD2.TOROID.ML/9FL2BURN.PULSEPATTERN{{/code}}
1211 -desc: The bunch pattern as function of time in a burst recorded by toroide diagnostic BEHIND the undulator. (FLASH2)
792 +//always saved (PBD)//
793 +DOOCS prop : {{code language="none"}}TTF2.DIAG/PBD.TOROID.ML/12EXP/CHARGE.TD{{/code}}
794 +DAQ channel: {{code language="none"}}TTF2.DIAG/PBD.TOROID.ML/12EXP{{/code}}
795 +desc: The bunch pattern as function of time in a burst recorded by toroide diagnostic BEHIND the undulator. (FLASH1)
1212 1212  units:
1213 1213  \\
1214 1214  
... ... @@ -1215,7 +1215,7 @@
1215 1215  ===== Train ID =====
1216 1216  
1217 1217  {{code language="none"}}/Timing/train ID{{/code}}
1218 -//always saved (PBD2)//
802 +//always saved (PBD)//
1219 1219  DOOCS prop : {{code language="none"}}none{{/code}}
1220 1220  DAQ channel: {{code language="none"}}none{{/code}}
1221 1221  desc: Each 10 Hz burst has its unique train ID. For the HDF5 dataset the ID is the same for all parameters with the same index (note camera images may be shifted by 1 ID - talk to the experts !)
... ... @@ -1224,16 +1224,13 @@
1224 1224  
1225 1225  ===== Train time =====
1226 1226  
1227 -//always saved (PBD2)
1228 -//{{code language="none"}}/Timing/train time{{/code}}
811 +{{code language="none"}}/Timing/train time{{/code}}
1229 1229  desc:Local time as array of day, hour, minute, second, and centisecond. This dataset is meant for visualisation purposes only. For correlations use the train ID or the Unix time of the time stamp
1230 1230  units: d h min s cs
1231 1231  \\
1232 1232  
1233 -{{code language="none"}}/Timing/time stamp{{/code}}
1234 -
1235 -//always saved (PBD2)//
1236 -desc: first column: Local time in unix time. To get day, hour, minute, second you can use unix: e.g. date ~-~-date='@1553617729' or matlab, python etc
816 +{{code language="none"}}/Timing/time stamp{{/code}}
817 +desc:first column: Local time in unix time. To get day, hour, minute, second you can use unix: e.g. date ~-~-date='@1553617729' or matlab, python etc
1237 1237  second column: microseconds
1238 1238  third column: Train ID of FLASH
1239 1239  \\
... ... @@ -1242,385 +1242,209 @@
1242 1242  
1243 1243  \\
1244 1244  
1245 -==== User Data (FLASH2) ====
1246 -
1247 -The data saved specifically for detectors at an experiment will show up in /Experiment/ there is a large number of options for cameras or monitoring pslow properties (motor positons etc) for user experiments. For details please ask your local contact.
1248 -
1249 -NOTE: If parameters for an experiment are included on short notice the correct naming in the HDF5 may not be in time and the data will show up in /uncategorized/ with the DOOCS names
1250 -
1251 -The most common and permanently installed device used by experiment are our ADCs:
1252 -
1253 -===== GHz ADCs =====
1254 -
1255 -ADC traces of the (SPDevices 412) GHZ ADCs available for the users . More information about the ADCs can be found** [[here>>doc:FLASHUSER.Data Acquisition and controls.Controls (DOOCS, jDDD,\.\.\.).MTCA ADCs.WebHome]]**
1256 -//saved on DEMAND in the user DAQ//
1257 -\\Up to now there are 4 channels available at FL24
1258 -\\\\{{code language="none"}}/FL2/Experiment/MTCA-EXP1/ADQ412 GHz ADC/CH00/TD{{/code}}
1259 -{{code language="none"}}/FL2/Experiment/MTCA-EXP1/ADQ412 GHz ADC/CH01/TD{{/code}}
1260 -\\{{code language="none"}}/FL2/Experiment/MTCA-EXP1/ADQ412 GHz ADC/CH02/TD{{/code}}{{code language="none"}}/FL2/Experiment/MTCA-EXP1/ADQ412 GHz ADC/CH03/TD{{/code}}
1261 -
1262 1262  \\
1263 1263  
1264 -DOOCS prop : {{code language="none"}}FLASH.FEL/ADC.ADQ.FL2EXP1/FL2EXP1.CH00/CH00.TD  or CH00.DAQ.TD{{/code}}
1265 -here the {{code language="none"}}CH00.TD{{/code}} is the full ADC trace as it is sampled ( typically several 100.000 samples per pulse train) while the {{code language="none"}}CH00.DAQ.TD{{/code}} trace only has the number of samples which are sent to the DAQ OR if //grouping// is activated the {{code language="none"}}CH00.DAQ.TD{{/code}} conatins only the grouped spectra. To read the ADC trace with an online analysis program the {{code language="none"}}CH00.DAQ.TD{{/code}} is used preferablly.
1266 -DAQ channel: {{code language="none"}}FLASH.FEL/ADC.ADQ.FL2EXP1/FL2EXP1.CH00{{/code}}
1267 -
1268 -In addition there are also additional parameters saved like:
1269 -
1270 -* {{code language="none"}}sample frequency{{/code}}: it shows the sample frequency in MHz (number of samples per µs). NOTE: the clock of the ADC is NOT synchronized to the FLASH timing system. Thus the number of samples between bunches in the bunch train may be not integer numbers which will be show up for long bunch trains.
1271 -* {{code language="none"}}number of samples{{/code}}: total number of samoles recorded for each 10 Hz trigger
1272 -* {{code language="none"}}error (ADC):{{/code}} 0 indicates that there was no error
1273 -* {{code language="none"}}/CH0-CH3/offset{{/code}}: To use the full dynamic range of the ADC one can shift the base line . This offset is saved here.
1274 -
1275 -===== MHz ADCs =====
1276 -
1277 -similar to the GHz ADCs the MHz ADCs are saved with HDF5 names like:
1278 -{{code language="none"}}/FL2/Experiment/MTCA-EXP1/SIS8300 100MHz ADC/CH2/TD{{/code}}
1279 -DOOCS prop : FLASH.FEL/ADC.SIS.FL2EXP1/FL2EXP1.CH02/CH00.TD
1280 -DAQ channel: : FLASH.FEL/ADC.SIS.FL2EXP1/FL2EXP1.CH02
1281 -
1282 -In addition there are also additional parameters saved like:
1283 -
1284 -* {{code language="none"}}sample frequency{{/code}}: it shows the sample frequency in MHz (number of samples per µs). NOTE: the clock of the ADC is NOT synchronized to the FLASH timing system. Thus the number of samples between bunches in the bunch train may be not integer numbers which will be show up for long bunch trains.
1285 -* {{code language="none"}}number of samples{{/code}}: total number of samoles recorded for each 10 Hz trigger
1286 -
1287 -[[Contents>>doc:||anchor="Contents"]]
1288 -
1289 1289  \\
1290 1290  
1291 1291  \\
1292 1292  
1293 -==== FL 24 Pump Probe Laser (FLASH2) ====
1294 -
1295 -These are the parameters that can be saved in the FL2 User DAQ for the FL2 PP laser//** FOR BEAMLINE FL24**//
1296 -
1297 1297  \\
1298 1298  
1299 -**User delay**
1300 -
1301 -Delay (set value):
1302 -
1303 -{{code language="none"}}FLASH.SYNC/LASER.LOCK.EXP/F2.PPL.OSC/FMC0.MD22.0.POSITION_SET.WR{{/code}}
1304 -
1305 -Delay (readback):
1306 -
1307 -{{code language="none"}}FLASH.SYNC/LASER.LOCK.EXP/F2.PPL.OSC/FMC0.MD22.0.POSITION.RD{{/code}}
1308 -
1309 -(% style="letter-spacing: 0.0px;" %)Delay (encoder readback):
1310 -
1311 -{{code language="none"}}FLASH.SYNC/LASER.LOCK.EXP/F2.PPL.OSC/FMC0.MD22.0.ENCODER_POSITION.RD{{/code}}
1312 -
1313 -OXC. jitter:
1314 -
1315 -{{code language="none"}}FLASH.SYNC/LASER.LOCK.EXP/F2.PPL.OSC/CURRENT_INPUT_JITTER.RD{{/code}}
1316 -
1317 1317  \\
1318 1318  
1319 1319  \\
1320 1320  
1321 -**FL24 Pulse resolved energy:**
1322 -
1323 -OPCPA output (photodiode signal raw ADC trace 16000 samples):
1324 -
1325 -{{code language="none"}}/zraw/FLASH.LASER/FLASH2CPUULGAN1.ADCSCOPE/CH23.TD/dGroup{{/code}}
1326 -
1327 -(% style="letter-spacing: 0.0px;" %)Upper breadboard Photodiode (THG) burst (photodiode signal raw ADC trace 16000 samples)::
1328 -
1329 -{{code language="none"}}/zraw/FLASH.LASER/FLASH2CPUULGAN1.ADCSCOPE/CH26.TD/dGroup{{/code}}
1330 -
1331 -Upper breadboard Photodiode (THG) energy (analyzed signal. integration over pulses in the ADC trace. contains for each laser pulse the pulse energy in a.u.)
1332 -
1333 -{{code language="none"}}/zraw/FLASH.LASER/MOD24.PES/FL24_userPD/dGroup{{/code}}
1334 -
1335 -\\
1336 -
1337 -**FL24 LAM (Laser Arrivaltime Monitor)  pulse resolved data:**
1338 -
1339 -Signal of Photodiode1  - for experts only... (analyzed signal. integration over pulses in the ADC trace. )
1340 -
1341 -{{code language="none"}}/zraw/FLASH.LASER/MOD24.PES/LAM.PD1/dGroup{{/code}}
1342 -
1343 -Signal of Photodiode2  - for experts only...  (analyzed signal. integration over pulses in the ADC trace.)
1344 -
1345 -{{code language="none"}}/zraw/FLASH.LASER/MOD24.PES/LAM.PD2/dGroup{{/code}}
1346 -
1347 -"Actual" LAM Signal - to be calibrated ......  (analyzed signal. integration over pulses in the ADC trace.)
1348 -
1349 -{{code language="none"}}/zraw/FLASH.LASER/MOD24.PES/LAM.PDBAL/dGroup{{/code}}
1350 -
1351 -The delay feedback(% style="letter-spacing: 0.0px;" %)
1352 -
1353 -{{code language="none"}}FLASH.LASER/ULGAN1.DYNPROP/TCFIBER.DOUBLES/DOUBLE26 {{/code}}
1354 -
1355 -The LAM delay feedback(% style="letter-spacing: 0.0px;" %) (the pulse energy signal, which is saved in the above but maybe it’s good to have this also as slow, in the case these two numbers are not the same the sysdc was active instead of the LAM):
1356 -
1357 -{{code language="none"}}FLASH.LASER/MOD24.PES/LAM.PDBAL/PULSEENERGY.MEAN{{/code}}
1358 -
1359 -LAM Delay line act:
1360 -
1361 -{{code language="none"}}FLASH.SYNC/LAM.EXP.ODL/F2.MOD.AMC12/FMC0.MD22.1.POSITION.RD{{/code}}
1362 -LAM Delay line set:
1363 -
1364 -{{code language="none"}}FLASH.SYNC/LAM.EXP.ODL/F2.MOD.AMC12/FMC0.MD22.1.POSITION_SET.WR{{/code}}
1365 -
1366 -LAM Delay line encoder:
1367 -
1368 -{{code language="none"}}FLASH.SYNC/LAM.EXP.ODL/F2.MOD.AMC12/FMC0.MD22.1.ENCODER_POSITION.RD{{/code}}
1369 -
1370 -Temperature feedback:
1371 -
1372 -{{code language="none"}}FLASH.LASER/ULGAN1.DYNPROP/TCFIBER.DOUBLES/DOUBLE24{{/code}}
1373 -
1374 -**Feedback mode** (if this is not =1 the delay FB is not active, then it’s either temp feedback controlled or failsave, maybe it’s good to have):
1375 -
1376 -{{code language="none"}}FLASH.LASER/ULGAN1.DYNPROP/TCFIBER.INTS/INTEGER30{{/code}}
1377 -
1378 -\\
1379 -
1380 -**FL24 Attenuator angle:**
1381 -
1382 -{{code language="none"}}FLASH.FEL/FLAPP2BEAMLINES/MOTOR1.FL24/FPOS{{/code}}
1383 -
1384 -**FL24 Polarization control:**
1385 -
1386 -{{code language="none"}}FLASH.FEL/FLAPP2BEAMLINES/MOTOR14.FL24/FPOS{{/code}}
1387 -
1388 -**SysDC delay error:**
1389 -
1390 -{{code language="none"}}FLASH.LASER/ULGAN1.DYNPROP/TCFIBER.DOUBLES/DOUBLE26{{/code}}
1391 -
1392 -\\
1393 -
1394 -**Timing error: (these two need to be observed and both=0 means no error)**
1395 -
1396 -{{code language="none"}}FLASH/CPUULGAN1.TIMING/ULGAN1/dT_alarm{{/code}}
1397 -
1398 -{{code language="none"}}FLASH/CPUULGAN1.TIMING/ULGAN1/dMPN{{/code}}
1399 -
1400 -**Laser error status:**
1401 -
1402 -\\
1403 -
1404 -**FL24 Virtual camera X and Y history, beam size: (use slow data)**
1405 -
1406 -{{code language="none"}}FLASH.LASER/MOD24.BEAMPOS/UV.VF_BP/CENTER.X{{/code}}
1407 -
1408 -{{code language="none"}}FLASH.LASER/MOD24.BEAMPOS/UV.VF_BP/CENTER.Y{{/code}}
1409 -
1410 -{{code language="none"}}FLASH.LASER/MOD24.CAM/UV.14.VF/ROI_SPECTRUM.X.SIG{{/code}}
1411 -
1412 -\\
1413 -
1414 -{{expand title="Parameters used until 2021"}}
1415 -
1416 -{{code language="none"}}/FL2/Experiment/Pump probe laser/FL24/attenuator position{{/code}}//always saved (PBD2)//
1417 -DOOCS prop : {{code language="none"}}FLASH.FEL/FLAPP2BEAMLINES/MOTOR1.FL24/FPOS{{/code}}
1418 -DAQ channel: {{code language="none"}}FLASH.FEL/FLAPP2BEAMLINES/MOTOR1.FL24/FPOS{{/code}}
1419 -desc: attenuation of the PPLaser in the FL24 hutch (rotation of a waveplate)
1420 -units : deg.
1421 -
1422 -\\
1423 -
1424 -
1425 -{{code language="none"}}/FL2/Experiment/Pump probe laser/FL24/polarization position{{/code}}//always saved (PBD2)//
1426 -DOOCS prop : {{code language="none"}}FLASH.FEL/FLAPP2BEAMLINES/MOTOR2.FL24/FPOS{{/code}}
1427 -DAQ channel: {{code language="none"}}FLASH.FEL/FLAPP2BEAMLINES/MOTOR2.FL24/FPOS{{/code}}
1428 -desc: attenuation of the PPLaser in the FL24 hutch (rotation of a waveplate)
1429 -units : deg.
1430 -
1431 -\\
1432 -
1433 -{{code language="none"}}/FL1/Experiment/Pump probe laser/laser delay readback{{/code}}
1434 -//always saved (PBD2)//
1435 -DOOCS prop : {{code language="none"}}FLASH.SYNC/LASER.LOCK.EXP/FLASH2.PPL1.OSC1/FMC0.MD22.0.POSITION.RD{{/code}}
1436 -DAQ channel: {{code language="none"}}FLASH.SYNC/LASER.LOCK.EXP/FLASH2.PPL1.OSC1/FMC0.MD22.0.POSITION.RD{{/code}}
1437 -desc: delay of the Pump probe laser - measured by the read back position of the motor. There is also the set value available ( upto now these values are only updating every 1-2 seconds. There is no fast encoder property as on FLASH1 available)
1438 -units : ps )
1439 -
1440 -\\
1441 -
1442 -{{code language="none"}}/FL1/Experiment/Pump probe laser/Synchronization/timing jitter RMS{{/code}}
1443 -//always saved (PBD)//
1444 -DOOCS prop : {{code language="none"}}FLASH.SYNC/LASER.LOCK.EXP/FLASH2.PPL1.OSC1/CURRENT_INPUT_JITTER.RD{{/code}}
1445 -DAQ channel: {{code language="none"}}FLASH.SYNC/LASER.LOCK.EXP/FLASH2.PPL1.OSC1/CURRENT_INPUT_JITTER.RD{{/code}}
1446 -desc: rms jitter of the fs-Oscillator
1447 -units: fs
1448 -{{/expand}}
1449 -
1450 -\\
1451 -
1452 -==== FL 26 Pump Probe Laser (FLASH2) ====
1453 -
1454 -These are the parameters that can be saved in the FL2 User DAQ for the FL2 PP laser//** FOR BEAMLINE FL26**//
1455 -
1456 -\\
1457 -
1458 -**User delay**
1459 -
1460 -Delay (set value):
1461 -
1462 -{{code language="none"}}FLASH.SYNC/LASER.LOCK.EXP/F2.PPL.OSC/FMC0.MD22.0.POSITION_SET.WR{{/code}}
1463 -
1464 -Delay (readback):
1465 -
1466 -{{code language="none"}}FLASH.SYNC/LASER.LOCK.EXP/F2.PPL.OSC/FMC0.MD22.0.POSITION.RD{{/code}}
1467 -
1468 -Delay (encoder readback):
1469 -
1470 -{{code language="none"}}FLASH.SYNC/LASER.LOCK.EXP/F2.PPL.OSC/FMC0.MD22.0.ENCODER_POSITION.RD{{/code}}
1471 -
1472 -OXC. jitter:
1473 -
1474 -{{code language="none"}}FLASH.SYNC/LASER.LOCK.EXP/F2.PPL.OSC/CURRENT_INPUT_JITTER.RD{{/code}}
1475 -
1476 -\\
1477 -
1478 -**Parameters for FL26**
1479 -
1480 1480  (% class="wrapped" %)
839 +|=(((
840 +DAQ name
841 +)))|=(((
842 +HDF5 name
843 +)))
1481 1481  |(((
1482 -FL2PPL FL26 REMI Attenuation: HWP motor current position
845 +FLASH.UTIL/FL2.UND.MOTOR/FL2SASE3/GAP
1483 1483  )))|(((
1484 -FLASH.FEL/FLAPP2BEAMLINES/MOTOR11.FL26B/FPOS
847 +/FL2/Electron Diagnostic/Undulator setting/SASE03 gap
1485 1485  )))
1486 1486  |(((
1487 -FL2PPL FL26 REMI Polarization: linear polarization angle
850 +FLASH.UTIL/FL2.UND.MOTOR/FL2SASE14/GAP
1488 1488  )))|(((
1489 -FLASH.FEL/FLAPP2BEAMLINES/MOTOR12.FL26B/FPOS
852 +/FL2/Electron Diagnostic/Undulator setting/SASE14 gap
1490 1490  )))
1491 1491  |(((
1492 -FL2PPL FL26 REMI Diagnostics: NIR spectrum
855 +TTF2.FEEDBACK/FL2.WAVELENGTHCONTROL/FLASH2/WAVELENGTH
1493 1493  )))|(((
1494 -FLASH.LASER/MOD26.SPECT/REMI/DAQ_CHANNEL
857 +/FL2/Electron Diagnostic/Undulator setting/set wavelength
1495 1495  )))
1496 1496  |(((
1497 -FL2PPL FL26 REMI Diagnostics: photo diode input MOD2.6 - pulse energy mean
860 +FLASH.FEL/XGM.PHOTONFLUX/FL2.HALL/PHOTONFLUX.UJ
1498 1498  )))|(((
1499 -FLASH.LASER/MOD26.PES/RE_OUT/PULSEENERGY.MEAN
862 +/FL2/Photon Diagnostic/GMD/Average energy/hall
1500 1500  )))
1501 1501  |(((
1502 -FL2PPL FL26 REMI Diagnostics: photo diode input MOD2.6 - intra burst pulse energy
865 +FLASH.FEL/XGM.PHOTONFLUX/FL2.HALL/PHOTONFLUX
1503 1503  )))|(((
1504 -FLASH.LASER/MOD26.PES/RE_OUT/DAQ_CHANNEL
867 +/FL2/Photon Diagnostic/GMD/Average energy/hall (raw)
1505 1505  )))
1506 1506  |(((
1507 -FL2PPL FL26 REMI Diagnostics: photo diode input MOD2.6 - raw adc
870 +FLASH.FEL/XGM.PHOTONFLUX/FL2.TUNNEL/PHOTONFLUX.UJ
1508 1508  )))|(((
1509 -FLASH.LASER/TAMC532DMA/ULGAN1_S5/CH04.TD
872 +/FL2/Photon Diagnostic/GMD/Average energy/tunnel
1510 1510  )))
1511 1511  |(((
1512 -FL2PPL FL26 REMI Diagnostics: photo diode input REMI - pulse energy mean
875 +FLASH.FEL/XGM.PHOTONFLUX/FL2.TUNNEL/PHOTONFLUX
1513 1513  )))|(((
1514 -FLASH.LASER/MOD26.PES/INC_BOX/PULSEENERGY.MEAN
877 +/FL2/Photon Diagnostic/GMD/Average energy/tunnel (raw)
1515 1515  )))
1516 1516  |(((
1517 -FL2PPL FL26 REMI Diagnostics: photo diode input REMI - intra burst pulse energy
880 +FLASH.FEL/XGM.POSMON/FL2.HALL/IX.POS
1518 1518  )))|(((
1519 -FLASH.LASER/MOD26.PES/INC_BOX/DAQ_CHANNEL
882 +/FL2/Photon Diagnostic/GMD/Average beam position/position hall horizontal
1520 1520  )))
1521 1521  |(((
1522 -FL2PPL FL26 REMI Diagnostics: photo diode input REMI - raw adc
885 +FLASH.FEL/XGM.POSMON/FL2.HALL/IY.POS
1523 1523  )))|(((
1524 -FLASH.LASER/TAMC532DMA/ULGAN1_S5/CH05.TD
887 +/FL2/Photon Diagnostic/GMD/Average beam position/position hall vertical
1525 1525  )))
1526 1526  |(((
1527 -FL2PPL FL26 REMI In coupling: filter wheel 1 position
890 +FLASH.FEL/XGM.POSMON/FL2.TUNNEL/IX.POS
1528 1528  )))|(((
1529 -FLASH/MOD26.FW1/FLASH2MOD26/pos
892 +/FL2/Photon Diagnostic/GMD/Average beam position/position tunnel horizontal
1530 1530  )))
1531 1531  |(((
1532 -FL2PPL FL26 REMI In coupling: filter wheel 2 position
895 +FLASH.FEL/XGM.POSMON/FL2.TUNNEL/IY.POS
1533 1533  )))|(((
1534 -FLASH/MOD26.FW2/FLASH2MOD26/pos
897 +/FL2/Photon Diagnostic/GMD/Average beam position/position tunnel vertical
1535 1535  )))
1536 1536  |(((
1537 -FL2PPL FL26 REMI: Energy meter REMI incoupling breadboard
900 +FLASH.FEL/XGM.BPM/FL2.HALL:0
1538 1538  )))|(((
1539 -FLASH.LASER/MOD26.OPHIRE/REINC.54/DAQ_CHANNEL
902 +/FL2/Photon Diagnostic/GMD/Pulse resolved beam position/position hall horizontal
1540 1540  )))
1541 1541  |(((
1542 -FL2PPL FL26 REMI Incoupling: focusing lens position
905 +FLASH.FEL/XGM.BPM/FL2.HALL:1
1543 1543  )))|(((
1544 -FLASH.FEL/FLAPP2BEAMLINES/MOTOR3.FL26B/FPOS
907 +/FL2/Photon Diagnostic/GMD/Pulse resolved beam position/position hall vertical
1545 1545  )))
1546 1546  |(((
1547 -FL2PPL FL26 REMI Incoupling: nearfield
910 +FLASH.FEL/XGM.BPM/FL2.TUNNEL:0
1548 1548  )))|(((
1549 -FLASH.LASER/MOD26.CAM/REINC.21.NF/DAQ_CHANNEL
912 +/FL2/Photon Diagnostic/GMD/Pulse resolved beam position/position tunnel horizontal
1550 1550  )))
1551 1551  |(((
1552 -FL2PPL FL26 REMI Incoupling: focus
915 +FLASH.FEL/XGM.BPM/FL2.TUNNEL:1
1553 1553  )))|(((
1554 -FLASH.LASER/MOD26.CAM/REINC.22.FF/DAQ_CHANNEL
917 +/FL2/Photon Diagnostic/GMD/Pulse resolved beam position/position tunnel vertical
1555 1555  )))
1556 1556  |(((
1557 -FL2PPL FL26 REMI Drift: relative arrival time intra burst LAM balanced - calb. in the PES
920 +FLASH.FEL/XGM.INTENSITY/FL2.TUNNEL:1
1558 1558  )))|(((
1559 -FLASH.LASER/MOD26.PES/LAM_DIFF/DAQ_CHANNEL
922 +/FL2/Photon Diagnostic/GMD/Pulse resolved energy/energy aux tunnel
1560 1560  )))
1561 1561  |(((
1562 -FL2PPL FL26 REMI Drift: forward signal (PD1)  raw
925 +FLASH.FEL/XGM.INTENSITY/FL2.HALL
1563 1563  )))|(((
1564 -FLASH.LASER/TAMC532DMA/ULGAN1_S5/CH00.TD
927 +/FL2/Photon Diagnostic/GMD/Pulse resolved energy/energy hall
1565 1565  )))
1566 1566  |(((
1567 -FL2PPL FL26 REMI Drift: backward signal (PD2) raw
930 +FLASH.FEL/XGM.INTENSITY/FL2.HALL:0
1568 1568  )))|(((
1569 -FLASH.LASER/TAMC532DMA/ULGAN1_S5/CH01.TD
932 +/FL2/Photon Diagnostic/GMD/Pulse resolved energy/energy hall
1570 1570  )))
1571 1571  |(((
1572 -FL2PPL FL26 REMI Drift: mean relative burst arrival time - avarage of the calib value
935 +FLASH.FEL/XGM.INTENSITY/FL2.TUNNEL
1573 1573  )))|(((
1574 -FLASH.LASER/MOD26.PES/LAM_DIFF/PULSEENERGY.MEAN
937 +/FL2/Photon Diagnostic/GMD/Pulse resolved energy/energy tunnel
1575 1575  )))
1576 1576  |(((
1577 -FL2PPL FL26 REMI Drift: delay line position (ODL of the LAM REMI)
940 +FLASH.FEL/XGM.INTENSITY/FL2.TUNNEL:0
1578 1578  )))|(((
1579 -FLASH.FEL/FLAPP2BEAMLINES/MOTOR14.FL26B/FPOS
942 +/FL2/Photon Diagnostic/GMD/Pulse resolved energy/energy tunnel
1580 1580  )))
1581 1581  |(((
1582 -FL2PPL FL26 Laser Hutch: delay line position (ODL of the osc. Sync / user delay)
945 +FLASH.UTIL/STORE/FL2.TUNNEL.OPIS/VAL042
1583 1583  )))|(((
1584 -FLASH.SYNC/LASER.LOCK.EXP/F2.PPL.OSC/FMC0.MD22.0.POSITION.RD
947 +/FL2/Photon Diagnostic/Wavelength/OPIS tunnel/Processed/mean phtoton energy
1585 1585  )))
1586 1586  |(((
1587 -FL2PPL FL26 REMI Drift: delay line encoder position (ODL REMI raw value)
950 +FLASH.UTIL/STORE/FL2.TUNNEL.OPIS/VAL040
1588 1588  )))|(((
1589 -FLASH.SYNC/LAM.EXP.ODL/F2.MOD.AMC12/FMC0.MD22.0.ENCODER_POSITION.RD
952 +/FL2/Photon Diagnostic/Wavelength/OPIS tunnel/Processed/mean wavelengt
1590 1590  )))
1591 1591  |(((
1592 -Jiiter between oscillator and MLO (inloop jitter osc. Sync)
955 +FLASH.FEL/ADC.ADQ/OPIS1.CH02
1593 1593  )))|(((
1594 -FLASH.SYNC/LASER.LOCK.EXP/F2.PPL.OSC/CURRENT_INPUT_JITTER.RD
957 +/FL2/Photon Diagnostic/Wavelength/OPIS tunnel/Raw data/CH02
1595 1595  )))
1596 1596  |(((
1597 -Temperature controlled fiber (PWM signal to the temperature controlled fiber delay sysdc)
960 +FLASH.DIAG/PBD2.TOROID.ML/9FL2BURN/CHARGE.FLASH2
1598 1598  )))|(((
1599 -FLASH.LASER/ULGAN1.DYNPROP/TCFIBER.DOUBLES/DOUBLE23
962 +/FL2/Electron Diagnostic/Bunch charge/after undulator
1600 1600  )))
1601 1601  |(((
1602 -Temperature controlled fiber (Temp of the fiber delay sysdc)
965 +FLASH.DIAG/PBD2.TOROID.ML/3GUN/CHARGE.FLASH2
1603 1603  )))|(((
1604 -FLASH.LASER/ULGAN1.DYNPROP/TCFIBER.DOUBLES/DOUBLE24
967 +/FL2/Electron Diagnostic/Bunch charge/at gun
1605 1605  )))
1606 1606  |(((
1607 -Sydc feedback data if LAM is not activated (sysdc delay)
970 +FLASH.FEL/FL20T.PH.MOTOR/MOTOR1.MOT1/FPOS
1608 1608  )))|(((
1609 -FLASH.LASER/ULGAN1.DYNPROP/TCFIBER.DOUBLES/DOUBLE26
972 +/FL2/Beamlines/Tunnel Apertures/position aperture1 horizontal
1610 1610  )))
974 +|(((
975 +FLASH.FEL/FL20T.PH.MOTOR/MOTOR2.MOT1/FPOS
976 +)))|(((
977 +/FL2/Beamlines/Tunnel Apertures/position aperture1 vertical
978 +)))
979 +|(((
980 +FLASH.FEL/ADC.SIS.FL2FS/FL20.SHUTTER
981 +)))|(((
982 +/FL2/Beamlines/FL20/Shutter/channel 0
983 +)))
984 +|(((
985 +FLASH.FEL/ADC.ADQ.FL2EXP1/FL2EXP1.CH00
986 +)))|(((
987 +/FL2/Experiment/MTCA-EXP1/ADQ412 GHz ADC/CH00/TD
988 +)))
989 +|(((
990 +FLASH.FEL/ADC.SIS.FL2EXP1/FL2EXP1.CH00
991 +)))|(((
992 +/FL2/Experiment/MTCA-EXP1/SIS8300 100MHz ADC/CH0/TD
993 +)))
994 +|(((
995 +FLASH.SYNC/LASER.LOCK.EXP/FLASH2.PPL1.OSC1/CURRENT_INPUT_JITTER.RD
996 +)))|(((
997 +/FL2/Experiment/Pump probe laser/Synchronization/timing jitter RMS
998 +)))
999 +|(((
1000 +FLASH.SYNC/LASER.LOCK.EXP/FLASH2.PPL1.OSC1/LOCK_STATUS.VALUE.RD
1001 +)))|(((
1002 +/FL2/Experiment/Pump probe laser/Synchronization/timing jitter RMS GECCO
1003 +)))
1004 +|(((
1005 +FLASH.SYNC/LASER.LOCK.EXP/FLASH2.PPL1.OSC1/FMC0.MD22.0.POSITION.RD
1006 +)))|(((
1007 +/FL2/Experiment/Pump probe laser/laser delay readback
1008 +)))
1009 +|(((
1010 +FLASH.SYNC/LASER.LOCK.EXP/FLASH2.PPL1.OSC1/FMC0.MD22.0.POSITION_SET.WR
1011 +)))|(((
1012 +/FL2/Experiment/Pump probe laser/laser delay set value
1013 +)))
1014 +|(((
1015 +FLASH.FEL/FLAPP2BEAMLINES/MOTOR1.FL24/FPOS
1016 +)))|(((
1017 +/FL2/Experiment/Pump probe laser/FL24/attenuator position
1018 +)))
1019 +|(((
1020 +FLASH.FEL/FLAPP2BEAMLINES/MOTOR2.FL24/POS
1021 +)))|(((
1022 +/FL2/Experiment/Pump probe laser/FL24/polarization position
1023 +)))
1611 1611  
1612 1612  \\
1613 1613  
1614 1614  [[Contents>>doc:||anchor="Contents"]]
1615 1615  
1616 -\\
1617 -
1618 -=== "/uncategorized/" ===
1619 -
1620 - If parameters for an experiment are included on short notice the correct naming in the HDF5 may not be in time and the data will show up in /uncategorized/ with their DOOCS names
1621 -
1622 -\\
1623 -
1624 1624  === HDF5 structure revisions ===
1625 1625  
1626 1626  Starting with Beamblock 4, August 2018, the hierarchy of the HDF group names have been adapted to reflect the new situation at FLASH. FLASH2 is operating for users quite some time now. Therefore, both accelerators appear equally in their respective HDF groups, namely "/FL1" and "/FL2". The root group of proper, by run organised HDF files have an attribute called "version". This version attribute has changed from "0.2.x" to "0.3.x". The changes in detail:
... ... @@ -1735,6 +1735,72 @@
1735 1735  [[Contents>>doc:||anchor="Contents"]]
1736 1736  
1737 1737  \\
1738 -{{/layout-cell}}
1739 -{{/layout-section}}
1740 -{{/layout}}
1143 +
1144 +== Example code showing how to access HDF5 files ==
1145 +
1146 +\\
1147 +
1148 +=== Samples how to read HDF5 with Matlab ===
1149 +
1150 +The examples apply to HDF files with HDF tree version before vers. 0.3.0.
1151 +
1152 +(% style="color: rgb(0,128,0);" %)%% read in the needed data p=path; path(p,'D:\mess-daten\DAQ-data\hdf5\Gotthard') % add the actual folder to the path hdf5file='FLASH1_EXP-2016-03-16T1420.h5'; % data with Gotthard and VLS
1153 +
1154 +(% style="color: rgb(0,128,0);" %)% h5disp(hdf5file,'/','min') % to get an idea what is in the file % h5info(hdf5file,'/Experiment/Gotthard1/BL.0') % get info about the individual channel
1155 +
1156 +(% style="color: rgb(0,128,0);" %)% read a Number per 10 Hz pulse train:
1157 +
1158 +(% class="code" %)
1159 +(((
1160 +FEL_Wavelength_energy_server=h5read(hdf5file,'/Photon Diagnostic/Wavelength/Calculated by energy/wavelength' );
1161 +)))
1162 +
1163 +(% style="color: rgb(0,128,0);" %)% read in a 1D array (spectrum) %GMD data GMD_Spectrum=h5read(hdf5file,'/Photon Diagnostic/GMD/Pulse resolved energy/energy BDA');
1164 +
1165 +(% style="color: rgb(0,128,0);" %)% This reads in all the data . One can also limit the amount of data read to a subset of the data stored in the file. e.g. for image Data (Gotthard)
1166 +
1167 +\\
1168 +
1169 +(% class="code" %)
1170 +(((
1171 +Start_event= 500 ; % define the first 10 Hz event
1172 + Number_of_events = 20; % how many 10 Hz events to load
1173 +)))
1174 +
1175 +(% style="color: rgb(0,128,0);" %)% read only part of the data:
1176 +
1177 +(% class="code" %)
1178 +(((
1179 +Gotthard_data=h5read(hdf5file,'/Experiment/Gotthard1/BL.0',[2 650 Start_event],[50 85 Number_of_events]);
1180 +)))
1181 +
1182 +(% style="color: rgb(0,128,0);" %)% start stop increment "manual" for 2 D data : [start bunch number in Gotthard data start pixelin spectrum start sample in 10 Hz trains], % [number of bunches in the Gotthard data number of points in the spectrum number of spectra ]
1183 +
1184 +(% class="code" %)
1185 +(((
1186 +VLS_Spectrum=h5read(hdf5file,'/Photon Diagnostic/Wavelength/VLS online spectrometer/PCO.ROI.X',[400 Start_event],[200 Number_of_events] );
1187 +
1188 +)))
1189 +
1190 +(% style="color: rgb(0,128,0);" %)% start stop increment "manual" for 1D data : [start sample in the spectrum start sample in 10 Hz trains],[number of points in the spectrum number of spectra ]
1191 +
1192 +(% style="color: rgb(0,128,0);" %)%GMD data
1193 +
1194 +(% class="code" %)
1195 +(((
1196 +GMD_Spectrum=h5read(hdf5file,'/Photon Diagnostic/GMD/Pulse resolved energy/energy BDA',[1 Start_event],[40 Number_of_events] );
1197 +)))
1198 +
1199 +[[Contents>>doc:||anchor="Contents"]]
1200 +
1201 +=== How to read HDF5 with Python via FLASHH5 ===
1202 +
1203 +With [[FlashH5>>doc:FLASHUSER.FLASHH5 for easier access of FLASH's HDF5 files]] we provide h5py based examples to access and evaluate FLASH's HDF5 files.
1204 +
1205 +\\
1206 +
1207 +== HDF5 and DOOCS ==
1208 +
1209 +Here is an outdated [[list with the available properties that are always saved (PBD) for FLASH1 as>>attach:FLASH1__DaqChannel2HdfNamePbd.xlsx]] HDF5 names and the corresponding DOOCS names
1210 +
1211 +[[Contents>>doc:||anchor="Contents"]]
BAM-basics and outlook-2018_DESY-template_16-9Format.pdf
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FLASH1__DaqChannel2HdfNamePbd.xlsx
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