Changes for page DEMO - Working with FLASH data
Last modified by makuadm on 2026-01-07 06:21
Summary
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Page properties (2 modified, 0 added, 0 removed)
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... ... @@ -1,1 +1,1 @@ 1 -DEMO - Documentation1 +DEMO - Working with FLASH data - Content
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... ... @@ -1,27 +1,195 @@ 1 -(% style="list-style-type: square;" %) 2 -* Short descriptions including Links: 3 -(% style="list-style-type: square;" %) 4 -** GPFS 5 -** JupyterHub 6 -** conda ? 1 +test 7 7 8 -(% style="list-style-type: square;" %) 9 -* Links Repository 10 -(% style="list-style-type: square;" %) 11 -** including Method Description 3 +---- 12 12 5 +=== TODO === 6 + 7 +(% class="task-list" %) 8 +((( 9 +{{task reference="/Tasks/Task_18" status="InProgress"}} 10 +Short descriptions including Links: → as Text\\ 11 + 12 +(% class="task-list" %) 13 +((( 14 + 15 + 16 +{{task reference="/Tasks/Task_19" status="InProgress"}} 17 +GPFS 18 +{{/task}} 19 + 20 +{{task reference="/Tasks/Task_20" status="InProgress"}} 21 +JupyterHub 22 +{{/task}} 23 + 24 +{{task reference="/Tasks/Task_21" status="InProgress"}} 25 +conda ? 26 +{{/task}} 27 +))) 28 +{{/task}} 29 +))) 30 + 13 13 \\ 14 14 15 -(% style="list-style-type: square;" %) 16 -* Links to Binder 33 +(% class="task-list" %) 34 +((( 35 +{{task reference="/Tasks/Task_22" status="InProgress"}} 36 +distribution 17 17 38 +(% class="task-list" %) 39 +((( 40 + 41 + 42 +{{task reference="/Tasks/Task_23" status="InProgress"}} 43 +channel (where to host?) 44 +{{/task}} 45 + 46 +{{task reference="/Tasks/Task_24" status="InProgress"}} 47 +environment file (repository with examples) 48 +{{/task}} 49 +))) 50 +{{/task}} 51 +))) 52 + 18 18 \\ 19 19 55 +(% class="task-list" %) 56 +((( 57 +{{task reference="/Tasks/Task_25" status="InProgress"}} 58 +Documentation 59 + 60 +(% class="task-list" %) 61 +((( 62 + 63 + 64 +{{task reference="/Tasks/Task_26" status="InProgress"}} 65 +here VS repository VS sphinx 66 +{{/task}} 67 +))) 68 +{{/task}} 69 +))) 70 + 20 20 \\ 21 21 22 -Questions: 73 +(% class="task-list" %) 74 +((( 75 +{{task reference="/Tasks/Task_27" status="InProgress"}} 76 +Binder 23 23 24 -(% style="list-style-type: square;" %) 25 -* for whom 26 -* where Maxwell / local / extern 27 -* distribution 78 +(% class="task-list" %) 79 +((( 80 + 81 + 82 +{{task reference="/Tasks/Task_28" status="InProgress"}} 83 +examples with Stefan 84 +{{/task}} 85 +))) 86 +{{/task}} 87 +))) 88 + 89 +\\ 90 + 91 +(% class="task-list" %) 92 +((( 93 +{{task reference="/Tasks/Task_29" status="InProgress"}} 94 +Screencast 95 + 96 +(% class="task-list" %) 97 +((( 98 + 99 + 100 +{{task reference="/Tasks/Task_30" status="InProgress"}} 101 +login in jupyter hub 102 +{{/task}} 103 + 104 +{{task reference="/Tasks/Task_31" status="InProgress"}} 105 +login maxwell display 106 +{{/task}} 107 + 108 +{{task reference="/Tasks/Task_32" status="InProgress"}} 109 +use slix 110 +{{/task}} 111 + 112 +{{task reference="/Tasks/Task_33" status="InProgress"}} 113 +use hdfview plugin in jupterLab 114 +{{/task}} 115 + 116 +{{task reference="/Tasks/Task_34" status="InProgress"}} 117 +create conda env with flashh5 118 +{{/task}} 119 +))) 120 +{{/task}} 121 +))) 122 + 123 +\\ 124 + 125 +\\ 126 + 127 +---- 128 + 129 +==== under review ==== 130 + 131 +\\ 132 + 133 +{{code language="bash"}} 134 +conda create -n flashh5 python=3.10 # 3.10 not necessary, but would prefer 3.8 or higher 135 +source activate flashh5 136 +conda install ipython numpy pandas #TODO: fix dependcies 137 +conda install -c https://www.desy.de/~cpassow/condarepo/ flashh5 138 + 139 +## on jhub 140 +conda install ipykernel 141 +python -m ipykernel install --user --name flashh5 --display-name "flashh5" 142 + 143 + 144 +## to remove on jhub 145 +## delete from: /home/$USER/.local/share/jupyter/kernels/ 146 +{{/code}} 147 + 148 +\\ 149 + 150 +{{code language="py" title="moved to repository?"}} 151 +class RunDirectory: 152 + 153 + def get_run_table(): # more or less information? RunComment | Number of Files | start & stop time ? 154 + ... 155 + 156 + def get_run(daq, run_number): # daq is not needed! 157 + 158 + ... 159 + 160 + 161 +class Run: 162 + 163 + def get_files(): 164 + ... 165 + 166 + def get_channels(): # of file #1 167 + ... 168 + 169 + def get_start_time(): # better as attribute? 170 + ... 171 + 172 + def get_stop_time(): # which? | better as attribute? 173 + ... 174 + 175 + def to_df(daq_map): # to_df(daq_map, slice) slice=[0:4] -> throw Exception 176 + ... 177 + 178 + def to_series(channel): 179 + ... 180 + 181 + def to_array(channel): 182 + ... 183 +{{/code}} 184 + 185 +{{code language="py" title="ideas"}} 186 +run.to_df(daq_map) 187 +run.to_series(daq_adr or daq_map) # on channel only? 188 +run.to_array(daq_adr) # on channel only? 189 + 190 +## interesting? 191 +# run.to_dask(daq_map) 192 +# run.to_xarray(daq_map) 193 +{{/code}} 194 + 195 +\\