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Last modified by makuadm on 2026-01-07 06:21
From version 29.1
edited by cpassow
on 2022-04-06 16:47
Change comment: There is no comment for this version
To version 21.1
edited by cpassow
on 2022-04-05 14:40
Change comment: There is no comment for this version

Summary

Details

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1 -DEMO - Working with FLASH data
1 +DEMO - Documentation
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1 -Experimental data is recorded as HDF files[link] on the GPFS file system[link]. The access rights[link to ACLs] are linked to the user's DESY account and can be managed by the PI via the GAMMA portal[link]. The experimental data can be downloaded via the GAMMA portal, but it is advised to use the DESY computing infrastructure. Access point are via ssh[link], Maxwell-Display Server[link] or JuyterHub[link]. We recommmend using the JupyterHub for data exploration and the SLURM resources[link] for high performances computing.
1 +test
2 2  
3 -For simplified acccess we provide a conda module flashh5[link] which can be installed in a personal conda environment[link] on the Maxwell Cluster. Example on the usage can be found here [link - repo + binder]
4 -
5 -\\
6 -
7 -{{expand title="TEST - How to login JupyterHub"}}
8 -
9 -
10 -{{view-file att--filename="tmp.mp4" height="250"/}}
11 -{{/expand}}
12 -
13 -\\
14 -
15 -\\
16 -
17 17  ----
18 18  
19 19  === TODO ===
20 20  
21 -(% class="task-list" %)
22 -(((
23 -{{task reference="/Tasks/Task_18" status="InProgress"}}
24 -Short descriptions including Links:   → as Text\\
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8 +* Short descriptions including Links:   → as Text\\
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10 +** GPFS
11 +** JupyterHub
12 +** conda ?
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27 -(((
28 -
29 -
30 -{{task reference="/Tasks/Task_19" status="InProgress"}}
31 -GPFS
32 -{{/task}}
33 -
34 -{{task reference="/Tasks/Task_40" status="InProgress"}}
35 -Access rights
36 -{{/task}}
37 -
38 -{{task reference="/Tasks/Task_41" status="InProgress"}}
39 -Gamma Portal
40 -{{/task}}
41 -
42 -{{task reference="/Tasks/Task_42" status="InProgress"}}
43 -Maxwell
44 -{{/task}}
45 -
46 -{{task reference="/Tasks/Task_20" status="InProgress"}}
47 -JupyterHub
48 -{{/task}}
49 -
50 -{{task reference="/Tasks/Task_21" status="InProgress"}}
51 -conda ?
52 -{{/task}}
53 -
54 -{{task reference="/Tasks/Task_36" status="InProgress"}}
55 -explain install from channel instead of fixed environment, but can use environment file from example repository
56 -{{/task}}
57 -)))
58 -{{/task}}
59 -)))
60 -
61 61  \\
62 62  
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64 -(((
65 -{{task reference="/Tasks/Task_22" status="InProgress"}}
66 -distribution
16 +* distribution
17 +** channel  (where to host?)
18 +** environment file (repository with examples)
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69 -(((
70 -
71 -
72 -{{task reference="/Tasks/Task_23" status="InProgress"}}
73 -channel  (where to host?)
74 -{{/task}}
75 -
76 -{{task reference="/Tasks/Task_24" status="InProgress"}}
77 -environment file (repository with examples)
78 -{{/task}}
79 -)))
80 -{{/task}}
81 -)))
82 -
83 83  \\
84 84  
85 -(% class="task-list" %)
86 -(((
87 -{{task reference="/Tasks/Task_25" status="InProgress"}}
88 -Documentation
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23 +* Documentation
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25 +** here VS repository vs sphinx
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93 -
94 -{{task reference="/Tasks/Task_26" status="InProgress"}}
95 -here VS repository VS sphinx
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97 -)))
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99 -)))
100 -
101 101  \\
102 102  
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104 -(((
105 -{{task reference="/Tasks/Task_27" status="InProgress"}}
106 -Binder
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30 +* Binder
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32 +** examples with Stefan
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113 -examples with Stefan
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115 -)))
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117 -)))
118 -
119 119  \\
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124 -Screencast
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37 +* Screencast
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39 +** login in jupyter hub
40 +** login maxwell display
41 +** use slix
42 +** use hdfview plugin in jupterLab
43 +** create conda env with flashh5
125 125  
126 -(% class="task-list" %)
127 -(((
128 -
129 -
130 -{{task reference="/Tasks/Task_30" status="InProgress"}}
131 -login in jupyter hub
132 -{{/task}}
133 -
134 -{{task reference="/Tasks/Task_31" status="InProgress"}}
135 -login maxwell display
136 -{{/task}}
137 -
138 -{{task reference="/Tasks/Task_32" status="InProgress"}}
139 -use slix
140 -{{/task}}
141 -
142 -{{task reference="/Tasks/Task_33" status="InProgress"}}
143 -use hdfview plugin in jupterLab
144 -{{/task}}
145 -
146 -{{task reference="/Tasks/Task_34" status="InProgress"}}
147 -create conda env with flashh5
148 -{{/task}}
149 -)))
150 -{{/task}}
151 -)))
152 -
153 153  \\
154 154  
155 155  \\
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188 188   ...
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190 190  
191 -class Run: # constructor optional without RunDirectory or use there self.path
83 +class Run:
192 192  
193 193   def get_files():
194 194   ...