Skip to Content
Last modified by makuadm on 2026-01-07 06:21
From version 7.1
edited by cpassow
on 2022-04-04 09:12
Change comment: There is no comment for this version
To version 28.1
edited by cpassow
on 2022-04-06 16:06
Change comment: There is no comment for this version

Summary

Details

Page properties
Title
... ... @@ -1,1 +1,1 @@
1 -DEMO - Documentation
1 +DEMO - Working with FLASH data
Content
... ... @@ -1,65 +1,206 @@
1 -(% style="list-style-type: square;" %)
2 -* Short descriptions including Links:
3 -(% style="list-style-type: square;" %)
4 -** GPFS
5 -** JupyterHub
6 -** conda ?
1 +test
7 7  
8 -(% style="list-style-type: square;" %)
9 -* Links Repository
10 -(% style="list-style-type: square;" %)
11 -** including Method Description
3 +\\
12 12  
5 +{{expand title="TEST - How to login JupyterHub"}}
6 +
7 +
8 +{{view-file att--filename="tmp.mp4" height="250"/}}
9 +{{/expand}}
10 +
13 13  \\
14 14  
15 -(% style="list-style-type: square;" %)
16 -* Links to Binder
13 +\\
17 17  
15 +----
16 +
17 +=== TODO ===
18 +
19 +(% class="task-list" %)
20 +(((
21 +{{task reference="/Tasks/Task_18" status="InProgress"}}
22 +Short descriptions including Links:   → as Text\\
23 +
24 +(% class="task-list" %)
25 +(((
26 +
27 +
28 +{{task reference="/Tasks/Task_19" status="InProgress"}}
29 +GPFS
30 +{{/task}}
31 +
32 +{{task reference="/Tasks/Task_40" status="InProgress"}}
33 +Access rights
34 +{{/task}}
35 +
36 +{{task reference="/Tasks/Task_41" status="InProgress"}}
37 +Gamma Portal
38 +{{/task}}
39 +
40 +{{task reference="/Tasks/Task_42" status="InProgress"}}
41 +Maxwell
42 +{{/task}}
43 +
44 +{{task reference="/Tasks/Task_20" status="InProgress"}}
45 +JupyterHub
46 +{{/task}}
47 +
48 +{{task reference="/Tasks/Task_21" status="InProgress"}}
49 +conda ?
50 +{{/task}}
51 +
52 +{{task reference="/Tasks/Task_36" status="InProgress"}}
53 +explain install from channel instead of fixed environment, but can use environment file from example repository
54 +{{/task}}
55 +)))
56 +{{/task}}
57 +)))
58 +
18 18  \\
19 19  
61 +(% class="task-list" %)
62 +(((
63 +{{task reference="/Tasks/Task_22" status="InProgress"}}
64 +distribution
65 +
66 +(% class="task-list" %)
67 +(((
68 +
69 +
70 +{{task reference="/Tasks/Task_23" status="InProgress"}}
71 +channel  (where to host?)
72 +{{/task}}
73 +
74 +{{task reference="/Tasks/Task_24" status="InProgress"}}
75 +environment file (repository with examples)
76 +{{/task}}
77 +)))
78 +{{/task}}
79 +)))
80 +
20 20  \\
21 21  
22 -Questions:
83 +(% class="task-list" %)
84 +(((
85 +{{task reference="/Tasks/Task_25" status="InProgress"}}
86 +Documentation
23 23  
24 -(% style="list-style-type: square;" %)
25 -* for whom
26 -* where Maxwell / local / extern
27 -* distribution\\
28 -(% style="list-style-type: square;" %)
29 -** channel?
30 -(% style="list-style-type: square;" %)
31 -*** where official hosted (DESY, privat, conda-forge)
32 -** enviroment?
33 -(% style="list-style-type: square;" %)
34 -*** via files / already created?
88 +(% class="task-list" %)
89 +(((
90 +
35 35  
92 +{{task reference="/Tasks/Task_26" status="InProgress"}}
93 +here VS repository VS sphinx
94 +{{/task}}
95 +)))
96 +{{/task}}
97 +)))
98 +
36 36  \\
37 37  
101 +(% class="task-list" %)
102 +(((
103 +{{task reference="/Tasks/Task_27" status="InProgress"}}
104 +Binder
105 +
106 +(% class="task-list" %)
107 +(((
108 +
109 +
110 +{{task reference="/Tasks/Task_28" status="InProgress"}}
111 +examples with Stefan
112 +{{/task}}
113 +)))
114 +{{/task}}
115 +)))
116 +
117 +\\
118 +
119 +(% class="task-list" %)
120 +(((
121 +{{task reference="/Tasks/Task_29" status="InProgress"}}
122 +Screencast
123 +
124 +(% class="task-list" %)
125 +(((
126 +
127 +
128 +{{task reference="/Tasks/Task_30" status="InProgress"}}
129 +login in jupyter hub
130 +{{/task}}
131 +
132 +{{task reference="/Tasks/Task_31" status="InProgress"}}
133 +login maxwell display
134 +{{/task}}
135 +
136 +{{task reference="/Tasks/Task_32" status="InProgress"}}
137 +use slix
138 +{{/task}}
139 +
140 +{{task reference="/Tasks/Task_33" status="InProgress"}}
141 +use hdfview plugin in jupterLab
142 +{{/task}}
143 +
144 +{{task reference="/Tasks/Task_34" status="InProgress"}}
145 +create conda env with flashh5
146 +{{/task}}
147 +)))
148 +{{/task}}
149 +)))
150 +
151 +\\
152 +
153 +\\
154 +
155 +----
156 +
157 +==== under review ====
158 +
159 +\\
160 +
161 +{{code language="bash"}}
162 +conda create -n flashh5 python=3.10 # 3.10 not necessary, but would prefer 3.8 or higher
163 +source activate flashh5
164 +conda install ipython numpy pandas #TODO: fix dependcies
165 +conda install -c https://www.desy.de/~cpassow/condarepo/ flashh5
166 +
167 +## on jhub
168 +conda install ipykernel
169 +python -m ipykernel install --user --name flashh5 --display-name "flashh5"
170 +
171 +
172 +## to remove on jhub
173 +## delete from: /home/$USER/.local/share/jupyter/kernels/
174 +{{/code}}
175 +
176 +\\
177 +
38 38  {{code language="py" title="moved to repository?"}}
39 39  class RunDirectory:
40 40  
41 - def get_run_table():
181 + def get_run_table(): # more or less information? RunComment | Number of Files | start & stop time ?
42 42   ...
43 43  
44 - def get_run(daq, run_number):
184 + def get_run(daq, run_number): # daq is not needed!
185 +
45 45   ...
46 46  
47 47  
48 -class Run:
189 +class Run: # constructor optional without RunDirectory or use there self.path
49 49  
50 50   def get_files():
51 51   ...
52 52  
53 - def get_channels(): # of file #1?
194 + def get_channels(): # of file #1
54 54   ...
55 55  
56 - def get_start_time():
197 + def get_start_time(): # better as attribute?
57 57   ...
58 58  
59 - def get_stop_time(): # which?
200 + def get_stop_time(): # which? | better as attribute?
60 60   ...
61 -
62 - def to_df(channel_map):
202 +
203 + def to_df(daq_map): # to_df(daq_map, slice) slice=[0:4] -> throw Exception
63 63   ...
64 64  
65 65   def to_series(channel):
... ... @@ -70,12 +70,13 @@
70 70  {{/code}}
71 71  
72 72  {{code language="py" title="ideas"}}
73 -run.to_df(channel_map)
74 -run.to_series(channel_string or channel_map) # on channel only?
75 -run.to_array(channel_string) # on channel only?
214 +run.to_df(daq_map)
215 +run.to_series(daq_adr or daq_map) # on channel only?
216 +run.to_array(daq_adr) # on channel only?
76 76  
77 -# run.to_dask(dict)
78 -# run.to_xarray(dict)
218 +## interesting?
219 +# run.to_dask(daq_map)
220 +# run.to_xarray(daq_map)
79 79  {{/code}}
80 80  
81 81  \\