Wiki source code of DEMO - Documentation
Version 20.1 by cpassow on 2022-04-04 15:18
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| author | version | line-number | content |
|---|---|---|---|
| 1 | (% style="list-style-type: square;" %) | ||
| 2 | * Short descriptions including Links: → as Text\\ | ||
| 3 | (% style="list-style-type: square;" %) | ||
| 4 | ** GPFS | ||
| 5 | ** JupyterHub | ||
| 6 | ** conda ? | ||
| 7 | |||
| 8 | \\ | ||
| 9 | |||
| 10 | (% style="list-style-type: square;" %) | ||
| 11 | * Links Repository | ||
| 12 | (% style="list-style-type: square;" %) | ||
| 13 | ** including Method Description: Readme or Sphinx ? | ||
| 14 | |||
| 15 | \\ | ||
| 16 | |||
| 17 | (% style="list-style-type: square;" %) | ||
| 18 | * Links to Binder | ||
| 19 | |||
| 20 | \\ | ||
| 21 | |||
| 22 | (% style="list-style-type: square;" %) | ||
| 23 | * Screencast | ||
| 24 | |||
| 25 | \\ | ||
| 26 | |||
| 27 | \\ | ||
| 28 | |||
| 29 | Questions: | ||
| 30 | |||
| 31 | (% style="list-style-type: square;" %) | ||
| 32 | * distribution\\ | ||
| 33 | (% style="list-style-type: square;" %) | ||
| 34 | ** channel | ||
| 35 | ** enviroment → as example for binder | ||
| 36 | |||
| 37 | \\ | ||
| 38 | |||
| 39 | {{code language="bash"}} | ||
| 40 | conda create -n flashh5 python=3.10 # 3.10 not necessary, but would prefer 3.8 or higher | ||
| 41 | source activate flashh5 | ||
| 42 | conda install ipython numpy pandas #TODO: fix dependcies | ||
| 43 | conda install -c https://www.desy.de/~cpassow/condarepo/ flashh5 | ||
| 44 | |||
| 45 | ## on jhub | ||
| 46 | conda install ipykernel | ||
| 47 | python -m ipykernel install --user --name flashh5 --display-name "flashh5" | ||
| 48 | |||
| 49 | |||
| 50 | ## to remove on jhub | ||
| 51 | ## delete from: /home/$USER/.local/share/jupyter/kernels/ | ||
| 52 | {{/code}} | ||
| 53 | |||
| 54 | \\ | ||
| 55 | |||
| 56 | {{code language="py" title="moved to repository?"}} | ||
| 57 | class RunDirectory: | ||
| 58 | |||
| 59 | def get_run_table(): # more or less information? RunComment | Number of Files | ||
| 60 | ... | ||
| 61 | |||
| 62 | def get_run(daq, run_number): # daq is not needed | ||
| 63 | ... | ||
| 64 | |||
| 65 | |||
| 66 | class Run: | ||
| 67 | |||
| 68 | def get_files(): | ||
| 69 | ... | ||
| 70 | |||
| 71 | def get_channels(): # of file #1 | ||
| 72 | ... | ||
| 73 | |||
| 74 | def get_start_time(): # better as attribute? | ||
| 75 | ... | ||
| 76 | |||
| 77 | def get_stop_time(): # which? | better as attribute? | ||
| 78 | ... | ||
| 79 | |||
| 80 | ### for following methods to restrict number of files or separate method | ||
| 81 | ### e.g. create_df(files) | ||
| 82 | |||
| 83 | def to_df(daq_map): # to_df(daq_map, slice) slice=[0:4] -> throw Exception | ||
| 84 | ... | ||
| 85 | |||
| 86 | def to_series(channel): | ||
| 87 | ... | ||
| 88 | |||
| 89 | def to_array(channel): | ||
| 90 | ... | ||
| 91 | {{/code}} | ||
| 92 | |||
| 93 | {{code language="py" title="ideas"}} | ||
| 94 | run.to_df(daq_map) | ||
| 95 | run.to_series(daq_adr or daq_map) # on channel only? | ||
| 96 | run.to_array(daq_adr) # on channel only? | ||
| 97 | |||
| 98 | ## is this interesting? | ||
| 99 | # run.to_dask(daq_map) | ||
| 100 | # run.to_xarray(daq_map) | ||
| 101 | {{/code}} | ||
| 102 | |||
| 103 | \\ |