Last modified by flenners on 2025-06-24 16:56

From version 15.1
edited by flenners
on 2022-03-30 17:44
Change comment: There is no comment for this version
To version 16.1
edited by flenners
on 2022-03-30 17:46
Change comment: There is no comment for this version

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... ... @@ -205,96 +205,8 @@
205 205  
206 206  If you have to add other users to a past beamtime, this can be done via the gamma-portal. After adding the accounts, these people have to make sure to log off from **all **FastX sessions, etc. to update the permissions.
207 207  
208 -= {{id name="00-HowtologintoMaxwell-StartingarecoGUI"/}}Starting a reco GUI =
209 -
210 -== {{id name="00-HowtologintoMaxwell-ShortVersion:"/}}Short Version: ==
211 -
212 -Terminal:
213 -
214 -(% class="code" %)
215 -(((
216 -salloc ~-~-partition=psx ~-~-nodes=1 –-time=06:00:00
217 -\\(if you need gpu: (% class="bash plain" %){{code language="none"}}--constraint=P100{{/code}}(%%) )
218 -\\ssh max-bla123
219 -\\module load anaconda/3
220 -\\source activate ~~/envs/tomopy
221 -\\spyder&
222 -)))
223 -
224 224  \\
225 225  
226 226  \\
227 227  
228 -{{code linenumbers="true" collapse="true"}}
229 -salloc --partition=psx --nodes=1 –-time=06:00:00
230 -
231 -ssh max-bla123
232 -
233 -module load anaconda/3
234 -
235 -source activate ~/envs/tomopy
236 -
237 -spyder&
238 -{{/code}}
239 -
240 240  \\
241 -
242 -Spyder:
243 -
244 -Open RecoGUI,
245 -
246 -(Right click on tab: "Set console working directory") (to be removed)
247 -
248 -Green Arrow to start program
249 -
250 -\\
251 -
252 -== {{id name="00-HowtologintoMaxwell-LongerVersion"/}}Longer Version ==
253 -
254 -\\
255 -
256 -Login to maxwell and allocate a node from the psx partition.
257 -
258 -\\
259 -
260 -You first have to **load the anaconda module:**
261 -
262 -(% class="code" %)
263 -(((
264 -module load anaconda/3
265 -\\
266 -)))
267 -
268 -and **activate your virtual environment**, depending on where you installed it:
269 -
270 -(% class="code" %)
271 -(((
272 -source activate ~~/envs/tomopy
273 -)))
274 -
275 -\\
276 -
277 -~~/ takes you back to your home directory. In this case, the environment "tomopy" was installed in the home directory in the folder "envs". 
278 -
279 -\\
280 -
281 -now you can **start spyder**:
282 -
283 -(% class="code" %)
284 -(((
285 -spyder&
286 -)))
287 -
288 -\\
289 -
290 -EXAMPLE: (virtual environment in "envs/p36"
291 -
292 -[[image:attach:image2021-4-27_13-53-35.png||height="71"]]
293 -
294 -\\
295 -
296 -You can also start another terminal e.g. if you want to look at your data / reconstructions in fiji.
297 -
298 -\\
299 -
300 -\\
Confluence.Code.ConfluencePageClass[0]
Id
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1 -250168659
1 +256492698
URL
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1 -https://confluence.desy.de/spaces/P5I/pages/250168659/00 - How to login to Maxwell
1 +https://confluence.desy.de/spaces/P5I/pages/256492698/00 - How to login to Maxwell