Last modified by flenners on 2025-06-24 16:56

From version 16.1
edited by flenners
on 2022-03-30 17:46
Change comment: There is no comment for this version
To version 15.1
edited by flenners
on 2022-03-30 17:44
Change comment: There is no comment for this version

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... ... @@ -205,8 +205,96 @@
205 205  
206 206  If you have to add other users to a past beamtime, this can be done via the gamma-portal. After adding the accounts, these people have to make sure to log off from **all **FastX sessions, etc. to update the permissions.
207 207  
208 += {{id name="00-HowtologintoMaxwell-StartingarecoGUI"/}}Starting a reco GUI =
209 +
210 +== {{id name="00-HowtologintoMaxwell-ShortVersion:"/}}Short Version: ==
211 +
212 +Terminal:
213 +
214 +(% class="code" %)
215 +(((
216 +salloc ~-~-partition=psx ~-~-nodes=1 –-time=06:00:00
217 +\\(if you need gpu: (% class="bash plain" %){{code language="none"}}--constraint=P100{{/code}}(%%) )
218 +\\ssh max-bla123
219 +\\module load anaconda/3
220 +\\source activate ~~/envs/tomopy
221 +\\spyder&
222 +)))
223 +
208 208  \\
209 209  
210 210  \\
211 211  
228 +{{code linenumbers="true" collapse="true"}}
229 +salloc --partition=psx --nodes=1 –-time=06:00:00
230 +
231 +ssh max-bla123
232 +
233 +module load anaconda/3
234 +
235 +source activate ~/envs/tomopy
236 +
237 +spyder&
238 +{{/code}}
239 +
212 212  \\
241 +
242 +Spyder:
243 +
244 +Open RecoGUI,
245 +
246 +(Right click on tab: "Set console working directory") (to be removed)
247 +
248 +Green Arrow to start program
249 +
250 +\\
251 +
252 +== {{id name="00-HowtologintoMaxwell-LongerVersion"/}}Longer Version ==
253 +
254 +\\
255 +
256 +Login to maxwell and allocate a node from the psx partition.
257 +
258 +\\
259 +
260 +You first have to **load the anaconda module:**
261 +
262 +(% class="code" %)
263 +(((
264 +module load anaconda/3
265 +\\
266 +)))
267 +
268 +and **activate your virtual environment**, depending on where you installed it:
269 +
270 +(% class="code" %)
271 +(((
272 +source activate ~~/envs/tomopy
273 +)))
274 +
275 +\\
276 +
277 +~~/ takes you back to your home directory. In this case, the environment "tomopy" was installed in the home directory in the folder "envs". 
278 +
279 +\\
280 +
281 +now you can **start spyder**:
282 +
283 +(% class="code" %)
284 +(((
285 +spyder&
286 +)))
287 +
288 +\\
289 +
290 +EXAMPLE: (virtual environment in "envs/p36"
291 +
292 +[[image:attach:image2021-4-27_13-53-35.png||height="71"]]
293 +
294 +\\
295 +
296 +You can also start another terminal e.g. if you want to look at your data / reconstructions in fiji.
297 +
298 +\\
299 +
300 +\\
Confluence.Code.ConfluencePageClass[0]
Id
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1 -256492698
1 +250168659
URL
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1 -https://confluence.desy.de/spaces/P5I/pages/256492698/00 - How to login to Maxwell
1 +https://confluence.desy.de/spaces/P5I/pages/250168659/00 - How to login to Maxwell