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Wiki source code of 05 Data Analysis

Last modified by flenners on 2026-02-06 11:33
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flenners 3.1 1 {{layout}}
2 {{layout-section ac:type="single"}}
3 {{layout-cell}}
flenners 5.1 4 You can use avizo and VGStudio via your desy account.
flenners 1.1 5
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flenners 4.1 7 Login into maxwell and allocate a node,  see [[doc:P5I.User Guide\: NanoCT.4\. Reconstruction Guide.00 - How to login to Maxwell.WebHome]]
flenners 2.1 8
flenners 5.1 9
flenners 3.1 10 {{/layout-cell}}
11 {{/layout-section}}
flenners 2.1 12
flenners 3.1 13 {{layout-section ac:type="single"}}
14 {{layout-cell}}
flenners 4.1 15 == {{id name="05DataAnalysis-Fiji/ImageJ"/}}Fiji / ImageJ ==
flenners 1.1 16
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flenners 3.1 18 Download fiji or use pre-installed version
flenners 2.1 19
flenners 3.1 20 To be able to install plugins, download fiji:
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22 [[https:~~/~~/imagej.net/software/fiji/>>url:https://imagej.net/software/fiji/||shape="rect"]]
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flenners 5.1 24
25 Start the preinstalled Fiji:
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27
28 {{{module load maxwell fiji
29
30 fiji}}}
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32
flenners 3.1 33 {{/layout-cell}}
34 {{/layout-section}}
flenners 2.1 35
flenners 3.1 36 {{layout-section ac:type="single"}}
37 {{layout-cell}}
flenners 5.1 38 == {{id name="05DataAnalysis-Avizo:"/}}Avizo: ==
flenners 2.1 39
flenners 3.1 40
41 (% class="code" %)
42 (((
43 module load maxwell
44 \\module load avizo
45 \\Avizo
46 )))
47
flenners 5.1 48
flenners 3.1 49 {{/layout-cell}}
50 {{/layout-section}}
51
52 {{layout-section ac:type="single"}}
53 {{layout-cell}}
flenners 5.1 54 == {{id name="05DataAnalysis-Vgstudiomax:"/}}(% style="letter-spacing:0.0px" %)Vgstudiomax:(%%) ==
flenners 3.1 55
56 (% class="code" %)
57 (((
58 module load maxwell
59 )))
60
61 (% class="code" %)
62 (((
flenners 2.1 63 module load vgstudiomax
flenners 3.1 64 )))
flenners 2.1 65
flenners 3.1 66 (% class="code" %)
67 (((
flenners 2.1 68 vgstudiomax
flenners 3.1 69 )))
70 {{/layout-cell}}
71 {{/layout-section}}
72 {{/layout}}