Changes for page Access data with ImageJ
Last modified by fwilde on 2018/12/18 12:01
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... ... @@ -10,7 +10,7 @@ 10 10 |=((( 11 11 suffix 12 12 )))|=((( 13 - ImageJdata type13 +data type 14 14 )))|=((( 15 15 header tag 16 16 ))) ... ... @@ -17,7 +17,7 @@ 17 17 |((( 18 18 19 19 )))|((( 20 -8 bit 20 +8 bit integer 21 21 )))|((( 22 22 B 23 23 ))) ... ... @@ -24,7 +24,7 @@ 24 24 |((( 25 25 .img .dar .ref 26 26 )))|((( 27 -16 bit Unsigned27 +16 bit unsigned integer 28 28 )))|((( 29 29 U 30 30 ))) ... ... @@ -31,7 +31,7 @@ 31 31 |((( 32 32 33 33 )))|((( 34 -16 bit Signed34 +16 bit integer 35 35 )))|((( 36 36 I 37 37 ))) ... ... @@ -38,7 +38,7 @@ 38 38 |((( 39 39 40 40 )))|((( 41 -32 bit Signed41 +32 bit integer 42 42 )))|((( 43 43 L 44 44 ))) ... ... @@ -45,7 +45,7 @@ 45 45 |((( 46 46 .sli .sin .sis 47 47 )))|((( 48 -32 bit Real48 +32 bit float 49 49 )))|((( 50 50 F 51 51 ))) ... ... @@ -52,14 +52,8 @@ 52 52 53 53 = {{id name="AccessdatawithImageJ-Importrawdatadirectly"/}}Import raw data directly = 54 54 55 -With ImageJ you can import binary data directly using {{code language="none"}}File > Import > Raw...{{/code}}. To import the raw data directly, read the header of the file you want to open, enter the values: 55 +With ImageJ you can import binary data directly using {{code language="none"}}File > Import > Raw...{{/code}}. To import the raw data directly, read the header of the file you want to open, enter the according values and check the box {{code language="none"}}Little-endian byte order{{/code}}. You can choose to {{code language="none"}}Open all files in folder{{/code}} if you want to open a stack with all file in a folder. **Attention**: {{code language="none"}}Use virtual stack{{/code}} does not work with this kind of import. To open a virtual stack you need to use our plugins. 56 56 57 -* Image type (see table ImageJ data type) 58 -* Width and height (last two numbers in header) 59 -* Offset to first image (i.e. header length) 60 - 61 -and check the box {{code language="none"}}Little-endian byte order{{/code}}. You can choose to {{code language="none"}}Open all files in folder{{/code}} if you want to open a stack with all file in a folder. **Attention**: {{code language="none"}}Use virtual stack{{/code}} does not work with this kind of import. To open a virtual stack you need to use our plugins. 62 - 63 63 [[image:attach:imagej_raw_import.png||height="250"]] 64 64 65 65 = {{id name="AccessdatawithImageJ-UsetheImageJplugins"/}}Use the ImageJ plugins =
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... ... @@ -1,1 +1,1 @@ 1 -42 3508151 +37489288 - URL
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... ... @@ -1,1 +1,1 @@ 1 -https://confluence.desy.de/spaces/P5I/pages/42 350815/Access data with ImageJ1 +https://confluence.desy.de/spaces/P5I/pages/37489288/Access data with ImageJ