Changes for page Access data with ImageJ

Last modified by fwilde on 2018/12/18 12:01
From version 6.1
edited by fwilde
on 2016/05/27 12:07
Change comment: There is no comment for this version
To version 1.1
edited by fwilde
on 2016/05/27 11:52
Change comment: There is no comment for this version

Summary

Details

Page properties
Title
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1 -Access data with ImageJ
1 +ImageJ plugins
Content
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1 -{{layout}}
2 -{{layout-section ac:type="two_right_sidebar"}}
3 -{{layout-cell}}
4 4  Currently, at P05 a generic data format is used to store raw and reconstructed data. Generally, this is a binary format in little endian byte order with different data types (uint16, real32, ...) and a header which describes the dataset (rows and columns, data format). This data can either be imported directly in ImageJ or loaded with our plugins.
5 5  
6 6  = {{id name="AccessdatawithImageJ-Importrawdata"/}}Import raw data =
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56 56  
57 57  In order to read the P05 data with our plugin, you have at least to install the {{code language="none"}}read_dat.class{{/code}}. Simply copy the file into your local ImageJ plugins folder. If you want to be able to open the data with the standard {{code language="none"}}File -> Open...{{/code}} Menu button, you addtionally have to install the ##(% style="color: rgb(0,0,0);" %)HandeExtraFileTypes.jar(%%)##(% style="color: rgb(0,0,0);" %). With this plugin you can also import an image stack as a virtual stack.
58 58  
59 -= {{id name="AccessdatawithImageJ-Downloads"/}}Downloads =
56 +{{view-file att--filename="HandleExtraFileTypes.jar" display="thumbnail" height="250"/}}
60 60  
61 -{{panel titleBGColor="blue" title="ImageJ Plugins" borderColor="blue" titleColor="white"}}
62 -**Binary files to copy to your plugin folder:**
63 -
64 -[[attach:HandleExtraFileTypes.jar]]
65 -
66 -[[read_dat.clas**s**>>attach:read_dat.class]]
67 -
68 -**Source code:**
69 -
70 -[[attach:HandleExtraFileTypes.java]]
71 -
72 -[[attach:read_dat.java]]
73 -{{/panel}}
74 -
75 -
76 -
77 -
78 -{{/layout-cell}}
79 -
80 -{{layout-cell}}
81 -
82 -
83 -{{toc/}}
84 -{{/layout-cell}}
85 -{{/layout-section}}
86 -{{/layout}}
58 +{{view-file att--filename="read_dat.class" display="thumbnail" height="250"/}}
Confluence.Code.ConfluencePageClass[0]
Id
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1 -37487025
1 +34870219
Title
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1 -Access data with ImageJ
1 +ImageJ plugins
URL
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1 -https://confluence.desy.de/spaces/P5I/pages/37487025/Access data with ImageJ
1 +https://confluence.desy.de/spaces/P5I/pages/34870219/ImageJ plugins