Changes for page IDL cheat sheet

Last modified by fwilde on 2025/03/28 19:55
From version 28.1
edited by fwilde
on 2018/12/18 12:09
Change comment: There is no comment for this version
To version 50.1
edited by fwilde
on 2020/10/10 12:45
Change comment: There is no comment for this version

Summary

Details

Page properties
Content
... ... @@ -1,15 +3,13 @@
1 -This is an overview of the most commonly used commands during a beamtime.
2 -
3 3  == {{id name="IDLcheatsheet-Coordinatesystem"/}}Coordinate system ==
4 4  
5 5  Right-handed coordinate system with y-direction along the x-ray beam.
6 6  
7 -\\
8 -
9 9  [[image:attach:p05_uct.png||width="700"]]
10 10  
11 11  == {{id name="IDLcheatsheet-Samplepositioning"/}}Sample positioning ==
12 12  
9 +=== {{id name="IDLcheatsheet-Relativemovement"/}}Relative movement ===
10 +
13 13  (% class="wrapped fixed-table" %)
14 14  |=(((
15 15  IDL command
... ... @@ -19,7 +19,7 @@
19 19  motion
20 20  )))
21 21  |(((
22 -s_stage_x/z, 1
20 +##**s_stage_x/z, 1**##
23 23  )))|(((
24 24  move rotation stage in x/z-direction by 1 mm
25 25  )))|(((
... ... @@ -26,14 +26,14 @@
26 26  relative [ mm ]
27 27  )))
28 28  |(((
29 -s_pos_z, 1
27 +##**s_pos_x/y/z, 1**##
30 30  )))|(((
31 -move sample stage in z-direction by 1 mm,
29 +move sample stage in x/y/z-direction by 1 mm (caution with directions: stage mount on rotation axis)
32 32  )))|(((
33 33  relative [ mm ]
34 34  )))
35 35  |(((
36 -s_pos_lateral, 1
34 +##**s_pos_lateral, 1**##
37 37  )))|(((
38 38  move sample stage in x-direction by 1 mm, regardless of position of rotation axis
39 39  )))|(((
... ... @@ -40,39 +40,16 @@
40 40  relative [ mm ]
41 41  )))
42 42  |(((
43 -s_angle, 90
41 +##**s_angle, 90**##
44 44  )))|(((
45 45  rotate sample around z axis
46 46  )))|(((
47 47  relative [ deg ]
48 48  )))
49 -|(((
50 -s_in
51 -)))|(((
52 -move sample to "in" position
53 -)))|(((
54 -predefined
55 -)))
56 -|(((
57 -s_out
58 -)))|(((
59 -move sample to "out" position
60 -)))|(((
61 -predefined
62 -)))
63 -|(((
64 -s_change
65 -)))|(((
66 -move sample to "change" position
67 -)))|(((
68 -predefined
69 -)))
70 70  
71 -\\
48 +=== {{id name="IDLcheatsheet-Absolutemovement"/}}Absolute movement ===
72 72  
73 -\\
74 -
75 -(% class="relative-table wrapped" style="width: 63.2385%;" %)
50 +(% class="relative-table wrapped" style="width: 67.0892%;" %)
76 76  |=(((
77 77  IDL command
78 78  )))|=(((
... ... @@ -81,7 +81,7 @@
81 81  motion
82 82  )))
83 83  |(((
84 -goto_s_stage_x/z, 1
59 +##**goto_s_stage_x/z, 1**##
85 85  )))|(((
86 86  move rotation stage in x/z-direction to 1 mm
87 87  )))|(((
... ... @@ -88,7 +88,7 @@
88 88  absolute [ mm ]
89 89  )))
90 90  |(((
91 -goto_s_pos_x/y/z, 1
66 +##**goto_s_pos_x/y/z, 1**##
92 92  )))|(((
93 93  move sample stage in x/y/z-direction to 1  mm
94 94  )))|(((
... ... @@ -95,14 +95,16 @@
95 95  absolute [ mm ]
96 96  )))
97 97  |(((
98 -goto_s_angle, 90
73 +##**goto_s_angle, 90**##
99 99  )))|(((
100 -rotate sample around z axis to 90°
75 +rotate sample around z axis to 90° (**alias command: s_rot**)
101 101  )))|(((
102 102  absolute [ deg ]
103 103  )))
104 104  
105 -(% class="relative-table wrapped" style="width: 51.477%;" %)
80 +=== {{id name="IDLcheatsheet-Getcurrentposition"/}}Get current position ===
81 +
82 +(% class="relative-table wrapped" style="width: 54.0627%;" %)
106 106  |=(((
107 107  IDL command
108 108  )))|=(((
... ... @@ -109,21 +109,74 @@
109 109  description
110 110  )))
111 111  |(((
112 -pos_s_stage_x/z()
89 +##**pos_s_stage_x/z()**##
113 113  )))|(((
114 114  return current rotation stage in x/z position
115 115  )))
116 116  |(((
117 -pos_s_pos_x/y/z()
94 +##**pos_s_pos_x/y/z()**##
118 118  )))|(((
119 119  return current sample stage in x/y/z position
120 120  )))
121 121  |(((
122 -pos_s_angle()
99 +##**pos_s_angle()**##
123 123  )))|(((
124 124  return current rotation stage angle
125 125  )))
126 126  
104 +=== {{id name="IDLcheatsheet-Predefinedpositions"/}}Predefined positions ===
105 +
106 +(% class="relative-table wrapped" style="width: 55.721%;" %)
107 +|=(((
108 +IDL command
109 +)))|=(((
110 +description
111 +)))
112 +|(((
113 +##**s_in**##
114 +)))|(((
115 +move sample to "in" position
116 +)))
117 +|(((
118 +##**s_out**##
119 +)))|(((
120 +move sample to "out" position
121 +)))
122 +|(((
123 +##**s_change**##
124 +)))|(((
125 +move sample to "change" position
126 +)))
127 +|(((
128 +##**set_s_in_pos, 0**##
129 +)))|(((
130 +set s_in position to 0.0 mm
131 +)))
132 +|(((
133 +##**set_s_out_dist, 10**##
134 +)))|(((
135 +set s_out distance to 10.0 mm
136 +)))
137 +
138 +=== {{id name="IDLcheatsheet-Magnificationsets"/}}Magnification sets ===
139 +
140 +(% class="wrapped" %)
141 +|=(((
142 +IDL command
143 +)))|=(((
144 +description
145 +)))
146 +|(((
147 +##**save_magn_set, 'dmm_11000ev_cmos_10x'**##
148 +)))|(((
149 +save current magnification set
150 +)))
151 +|(((
152 +##**restore_magn_set, 'dmm_11000ev_cmos_10x'**##
153 +)))|(((
154 +restore magnification set with the name 'dmm_11000ev_cmos_10x'
155 +)))
156 +
127 127  == {{id name="IDLcheatsheet-Detectorpositioning"/}}Detector positioning ==
128 128  
129 129  (% class="wrapped fixed-table" %)
... ... @@ -135,30 +135,30 @@
135 135  motion
136 136  )))
137 137  |(((
138 -pressure_on
168 +##**o_ccd_dist, 5**##
139 139  )))|(((
140 -enable detector y movement
170 +move detector in y direction relative by 5 mm
141 141  )))|(((
142 -\\
172 +relative [ mm ]
143 143  )))
144 144  |(((
145 -o_ccd_dist, 5
175 +##**goto_o_ccd_dist, 30**##
146 146  )))|(((
147 -move detector in y direction
177 +move detector in y direction absoilute to 30 mm
148 148  )))|(((
149 -relative [ mm ]
179 +\\
150 150  )))
151 151  |(((
152 -pressure_off
182 +##**pos_o_ccd_dist()**##
153 153  )))|(((
154 -disable detector movement
184 +return current of the camera stage distance
155 155  )))|(((
156 156  \\
157 157  )))
158 158  
159 -== {{id name="IDLcheatsheet-Makeimage"/}}Make image ==
189 +== {{id name="IDLcheatsheet-Slitpositioning"/}}Slit positioning ==
160 160  
161 -(% class="wrapped fixed-table" %)
191 +(% class="wrapped" %)
162 162  |=(((
163 163  IDL command
164 164  )))|=(((
... ... @@ -165,35 +165,85 @@
165 165  description
166 166  )))
167 167  |(((
168 -i=quick(100) & tv_quick, i & draw_box, [ x1, x2 ,z1 ,z2 ]
198 +##**slit_oh, rx=1 (rz=1)**##
169 169  )))|(((
170 -make an image & show image & draw box
200 +moves oh slit aperture horizontally (vertically) by 1mm
171 171  )))
172 172  |(((
173 -a=quick_abs(100) & tv_quick, a & draw_box, [ x1, x2 ,z1 ,z2 ]
203 +##**slit_oh, rdx=1 (rdz=1)**##
174 174  )))|(((
175 -make an absorption image & show image & draw box
205 +opens oh the slit aperture horizontally (vertically) by 1 mm
176 176  )))
207 +|(((
208 +##**slit_eh2, rx=1 (rz=1)**##
209 +)))|(((
210 +moves eh2 slit aperture horizontally (vertically) by 1 mm
211 +)))
212 +|(((
213 +##**slit_eh2, rdx=1 (rdz=1)**##
214 +)))|(((
215 +opens eh2 the slit aperture horizontally (vertically) by 1 mm
216 +)))
217 +|(((
218 +##**slit_info**##
219 +)))|(((
220 +show all slit positions
221 +)))
177 177  
178 -== {{id name="IDLcheatsheet-Monochromatorpositioning"/}}Monochromator positioning ==
223 +rx, rdx, rz and rdz can be concatenated in one command (e.g. slit_oh, rx=1, rz=-2, rdx=0.5, rdz=0.5)
179 179  
225 +== {{id name="IDLcheatsheet-Makeandsaveimages"/}}Make and save images ==
226 +
180 180  (% class="wrapped fixed-table" %)
181 181  |=(((
182 182  IDL command
183 183  )))|=(((
184 184  description
185 -)))|=(((
186 -motion
187 187  )))
188 188  |(((
189 -calc_dcm_energy, 10000, /set
234 +##**i=quick(100) & display_image, BYSTCL(i, 0, 4096)
235 +**##
190 190  )))|(((
191 -set DCM and undulator to 10 keV
237 +make an image & scale image (eg. from 0 to 4096, usually from 0 to maximum value the camera can do)
238 +)))
239 +|(((
240 +##**a=quick_abs(100) & display_image, BYTSCL(a, 0, 2)**##
192 192  )))|(((
242 +make an absorption image & scale image (usually from 0 to to 2)
243 +)))
244 +|(((
245 +##**write_tiff, '/gpfs/current/raw/test_projection.tif', i, /SHORT**##
246 +)))|(((
247 +save i as 16-bit integer tiff in /gpfs/...
248 +)))
249 +|(((
250 +##**write_tiff, '/gpfs/current/raw/test_absorption.tif', a, /FLOAT**##
251 +)))|(((
252 +save a as 32-bit float tiff in /gpfs/...
253 +)))
254 +
193 193  \\
256 +
257 +\\
258 +
259 +{{info title="Monochromator positioning"}}
260 +ATTENTION: Setting up a Monochromator as well as positioning front end slits is **only** done by the beamline staff!
261 +
262 +The commands above may be used by users to realign the beam should it beam profile drift with time.
263 +{{/info}}
264 +
265 +== {{id name="IDLcheatsheet-DCMpositioning"/}}DCM positioning ==
266 +
267 +(% class="wrapped fixed-table" %)
268 +|=(((
269 +IDL command
270 +)))|=(((
271 +description
272 +)))|=(((
273 +motion
194 194  )))
195 195  |(((
196 -dcm_pitch, 0.00001
276 +##**dcm_pitch, 0.00001**##
197 197  )))|(((
198 198  move 2nd crystal pitch by 0.00001 deg
199 199  )))|(((
... ... @@ -200,7 +200,7 @@
200 200  relative [ deg ]
201 201  )))
202 202  |(((
203 -goto_dcm_pitch,  -0.03976
283 +##**goto_dcm_pitch,  -0.03976**##
204 204  )))|(((
205 205  move 2nd crystal pitch to -0.03976 deg
206 206  )))|(((
... ... @@ -207,37 +207,44 @@
207 207  absolute [ deg ]
208 208  )))
209 209  |(((
210 -reflex_opt
290 +##**reflex_opt**##
211 211  )))|(((
212 212  move 2nd crystal pitch to optimal flux position
213 213  )))|(((
214 214  \\
215 215  )))
216 -|(((
217 -gap, 0.01
218 -)))|(((
219 -move undulator gap by 0.01 mm
220 -)))|(((
221 -relative [ mm ]
222 -)))
223 223  
224 -== {{id name="IDLcheatsheet-Saveanimageastiff"/}}Save an image as tiff ==
297 +== {{id name="IDLcheatsheet-DMMpositioning"/}}DMM positioning ==
225 225  
226 -(% class="wrapped relative-table" style="width: 60.1204%;" %)
299 +(% class="fixed-table wrapped" %)
227 227  |=(((
228 228  IDL command
229 229  )))|=(((
230 -desciption
303 +description
304 +)))|=(((
305 +motion
231 231  )))
232 232  |(((
233 -write_tiff, '/gpfs/current/raw/test.tif', i, /SHORT
308 +##**dmm_x2_rot, 0.001**##
234 234  )))|(((
235 -save i as 16-bit tiff in /gofs/...
310 +move 2nd crystal pitch by 0.00001 deg
311 +)))|(((
312 +relative [ deg ]
236 236  )))
314 +|(((
315 +##**goto_dmm_x2_rot,  0.8923
316 +**##
317 +)))|(((
318 +move 2nd crystal pitch to 0.8923 deg
319 +)))|(((
320 +absolute [ deg ]
321 +)))
237 237  
238 -== {{id name="IDLcheatsheet-Generalremarks"/}}General remarks ==
323 +\\
239 239  
240 -(% class="wrapped relative-table" style="width: 51.5317%;" %)
325 +== {{id name="IDLcheatsheet-Generalsyntax"/}}General syntax ==
326 +
327 +(% class="wrapped relative-table" style="width: 45.5603%;" %)
241 241  |=(((
242 242  Functionality
243 243  )))|=(((
... ... @@ -244,7 +244,7 @@
244 244  IDL syntax
245 245  )))
246 246  |(((
247 -Chaining commands
334 +chaining commands
248 248  )))|(((
249 249  command_1 **&** command_2 **&** ...
250 250  )))
... ... @@ -263,3 +263,52 @@
263 263  )))|(((
264 264  **pos_**//motor//()
265 265  )))
353 +
354 +== {{id name="IDLcheatsheet-BeamshutterandInterlockcontrol"/}}Beamshutter and Interlock control ==
355 +
356 +(% class="wrapped relative-table" style="width: 75.0455%;" %)
357 +|=(((
358 +IDL command
359 +)))|=(((
360 +description
361 +)))
362 +|(((
363 +##**bs_info**##
364 +)))|(((
365 +prints an overview of the beamline beamshutter status
366 +)))
367 +|(((
368 +##**bsoh_open / bsoh_close**##
369 +)))|(((
370 +opens / closes the optics hutch beamshutter. Closing the OH beamshutter will close all following beamshutters (EH1, EH2)
371 +)))
372 +|(((
373 +##**bseh1_open / bseh1_close**##
374 +)))|(((
375 +opens / closes the EH1 beamshutter. Opening will open the OH beamshutter as well. Closing the OH beamshutter will the EH2 beamshutter as well
376 +)))
377 +|(((
378 +##**bseh2_open / bseh2_close**##
379 +)))|(((
380 +opens / closes the EH2 beamshutter. Openening will open the OH and EH1 beamshutters as well.
381 +)))
382 +|(((
383 +##**ics_info**##
384 +)))|(((
385 +prints an overview of the beamline interlock status
386 +)))
387 +|(((
388 +##**ics_break_oh**##
389 +)))|(((
390 +closes all P05 beamshutters and breaks OH door interlock. P06 beamshutter must be closed for this command to work!
391 +)))
392 +|(((
393 +##**ics_break_eh1**##
394 +)))|(((
395 +closes EH1 beamshutter (and EH2 beamshutter  if open) and breaks EH1 door interlock
396 +)))
397 +|(((
398 +##**ics_break_eh2**##
399 +)))|(((
400 +closes EH2 beshutter and breaks EH2 door interlock
401 +)))
Confluence.Code.ConfluencePageClass[0]
Id
... ... @@ -1,1 +1,1 @@
1 -116602080
1 +297508006
URL
... ... @@ -1,1 +1,1 @@
1 -https://confluence.desy.de/spaces/P5I/pages/116602080/IDL cheat sheet
1 +https://confluence.desy.de/spaces/P5I/pages/297508006/IDL cheat sheet