Changes for page IDL cheat sheet

Last modified by fwilde on 2025/03/28 19:55

From 46.1 to 45.1 From 57.1 to 56.1

From version 56.1

edited by fwilde
on 2024/06/13 14:48

Change comment: There is no comment for this version

To version 46.1

edited by fwilde
on 2020/10/10 12:21

Change comment: There is no comment for this version

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@@ -1,4 +1,4 @@
--== {{id name="IDLcheatsheet-eCoordinatesystem"/}}eCoordinate system ==
++== {{id name="IDLcheatsheet-Coordinatesystem"/}}Coordinate system ==
  Right-handed coordinate system with y-direction along the x-ray beam.
@@ -31,7 +31,7 @@
  relative [ mm ]
  )))
  |(((
--##**s_pos, 1**##
++##**s_pos_lateral, 1**##
  )))|(((
  move sample stage in x-direction by 1 mm, regardless of position of rotation axis
  )))|(((
@@ -125,9 +125,9 @@
  move sample to "change" position
  )))
  |(((
--##**set_s_in_pos(, 0)**##
++##**set_s_in_pos, 0**##
  )))|(((
--set s_in position to current stage position, or optionally to e.g. 0.0 mm
++set s_in position to 0.0 mm
  )))
  |(((
  ##**set_s_out_dist, 10**##
@@ -144,16 +144,14 @@
  description
  )))
  |(((
--##**save_magn_set(, name_add)
--**##
++##**save_magn_set, 'dmm_11000ev_cmos_10x'**##
  )))|(((
--save current magnification set, optionally add something to the automatically generated name
++save current magnification set
  )))
  |(((
--##**restore_magn_set(, name)
--**##
++##**restore_magn_set, 'dmm_11000ev_cmos_10x'**##
  )))|(((
--restore last magnification set, or optionally load a file with a specific name
++restore magnification set with the name 'dmm_11000ev_cmos_10x'
  )))
  == {{id name="IDLcheatsheet-Detectorpositioning"/}}Detector positioning ==
@@ -167,23 +167,23 @@
  motion
  )))
  |(((
--##**o_ccd_dist, 5**##
++##**pressure_on**##
  )))|(((
--move detector in y direction relative by 5 mm
++enable detector y movement
  )))|(((
--relative [ mm ]
++\\
  )))
  |(((
--##**goto_o_ccd_dist, 30**##
++##**o_ccd_dist, 5**##
  )))|(((
--move detector in y direction absoilute to 30 mm
++move detector in y direction
  )))|(((
--\\
++relative [ mm ]
  )))
  |(((
--##**pos_o_ccd_dist()**##
++##**pressure_off**##
  )))|(((
--return current of the camera stage distance
++disable detector movement
  )))|(((
  \\
  )))
@@ -197,24 +197,14 @@
  description
  )))
  |(((
--##**slit_oh, rx=1 (rz=1)**##
--)))|(((
--moves oh slit aperture horizontally (vertically) by 1mm
--)))
--|(((
--##**slit_oh, rdx=1 (rdz=1)**##
--)))|(((
--opens oh the slit aperture horizontally (vertically) by 1 mm
--)))
--|(((
  ##**slit_eh2, rx=1 (rz=1)**##
  )))|(((
--moves eh2 slit aperture horizontally (vertically) by 1 mm
++moves eh2 slit aperture horizontally (vertically) by 1mm , **works analoguous for slit_oh and slit_ps2**
  )))
  |(((
--##**slit_eh2, rdx=1 (rdz=1)**##
++##**slit_eh2, rdz=1 (rdz=1)**##
  )))|(((
--opens eh2 the slit aperture horizontally (vertically) by 1 mm
++opens eh2 the slit aperture horizontally (vertically) by 1 mm, **works analoguous for slit_oh and slit_ps2**
  )))
  |(((
  ##**slit_info**##
@@ -224,7 +224,7 @@
  rx, rdx, rz and rdz can be concatenated in one command (e.g. slit_oh, rx=1, rz=-2, rdx=0.5, rdz=0.5)
--== {{id name="IDLcheatsheet-Makeandsaveimages"/}}Make and save images ==
++== {{id name="IDLcheatsheet-Makeimages"/}}Make images ==
  (% class="wrapped fixed-table" %)
  |=(((
@@ -233,91 +233,37 @@
  description
  )))
  |(((
--##**i=quick(100) & display_image, BYSTCL(i, 0, 4096)
--**##
++##**i=quick(100) & tv_quick, i & draw_box, [ x1, x2 ,z1 ,z2 ]**##
  )))|(((
--make an image & scale image (eg. from 0 to 4096, usually from 0 to maximum value the camera can do)
++make an image & show image & draw box
  )))
  |(((
--##**a=quick_abs(100) & display_image, BYTSCL(a, 0, 2)**##
++##**a=quick_abs(100) & tv_quick, a & draw_box, [ x1, x2 ,z1 ,z2 ]**##
  )))|(((
--make an absorption image & scale image (usually from 0 to to 2)
++make an absorption image & show image & draw box
  )))
  |(((
--##**write_tiff, '/gpfs/current/raw/test_projection.tif', i, /SHORT**##
++##**write_tiff, '/gpfs/current/raw/test.tif', i, /SHORT**##
  )))|(((
--save i as 16-bit integer tiff in /gpfs/...
++save i as 16-bit tiff in /gpfs/...
  )))
--|(((
--##**write_tiff, '/gpfs/current/raw/test_absorption.tif', a, /FLOAT**##
--)))|(((
--save a as 32-bit float tiff in /gpfs/...
--)))
--== {{id name="IDLcheatsheet-Macrosmotion+images"/}}Macros motion  + images ==
++== {{id name="IDLcheatsheet-Monochromatorpositioning"/}}Monochromator positioning ==
--These macros make images with predefined and internally saved values (like exposure time or display scale). Some move an axis first and then make an image (again with internally saved options likeexposure time, and image type). Use these macros to quickly align you samples.
--
--(% class="relative-table wrapped" style="width: 114.69%;" %)
++(% class="wrapped fixed-table" %)
  |=(((
  IDL command
  )))|=(((
  description
++)))|=(((
++motion
  )))
  |(((
--**{{code language="none"}}qt (, t=100, scale=[0,4096]){{/code}}**
++##**calc_dcm_energy, 10000, /set**##
  )))|(((
--Quick **transmission** image at the current position. Options: set new exposure time.
--)))
--|(((
--**{{code language="none"}}qa (, t=100, scale=[0,2], /ref, /here){{/code}}**
++set DCM and undulator to 10 keV
  )))|(((
--Quick **absorption** image at s_in position. Options: set new exposure time, make new reference image, make image at current position.
--)))
--|(((
--**{{code language="none"}}qp (, t=100, scale=[0,2], /ref, /here){{/code}}**
--)))|(((
--Quick **phase** image at s_in position. Options: set new exposure time, make new reference image, make image at current position
--)))
--|(((
--**{{code language="none"}}side, 90 (, t=100, /ref, /rel, /here, imgtype='a') {{/code}}**
--)))|(((
--**Rotate** (absolute degrees) and make an image at the new position. Options: set new exposure time, make new reference image, make image at current position, set image type ('a': absorption, 't': transmission, 'p' phase)
--)))
--|(((
--**{{code language="none"}}sshift, 2 (, t=100, /ref, /here, imgtype='a'){{/code}}**
--)))|(((
--Move **sample stage laterally** (relative, mm) and make an image at the new position. Options: set exposure time, make new reference image, , make image at current position, set image type ('a': absorption, 't': transmission, 'p' phase)
--)))
--|(((
--##**sz, 2 (, t=100, /ref, /here, imgtype='a')**##
--)))|(((
--Move **rotation stage up or down** (relative, mm) and make an image at the new position. Options: set exposure time, make reference image, make image at current position, set image type ('a': absorption, 't': transmission, 'p' phase)
--)))
--|(((
--**{{code language="none"}}zx, 2 (, t=100, /ref, /here, imgtype='a'){{/code}}
--**
--)))|(((
--Move **rotation stage left or right** (relative, mm) and make an image at the new position. Options: set exposure time, make reference image, make image at current position, set image type ('a': absorption, 't': transmission, 'p' phase)
--)))
--
  \\
--
--{{info title="Monochromator positioning"}}
--ATTENTION: Setting up a Monochromator as well as positioning front end slits is **only** done by the beamline staff!
--
--The commands above may be used by users to realign the beam should it beam profile drift with time.
--{{/info}}
--
--== {{id name="IDLcheatsheet-DCMpositioning"/}}DCM positioning ==
--
--(% class="wrapped fixed-table" %)
--|=(((
--IDL command
--)))|=(((
--description
--)))|=(((
--motion
  )))
  |(((
  ##**dcm_pitch, 0.00001**##
@@ -334,41 +334,27 @@
  absolute [ deg ]
  )))
  |(((
--##**reflex_opt_single**##
++##**reflex_opt**##
  )))|(((
  move 2nd crystal pitch to optimal flux position
  )))|(((
  \\
  )))
--
--== {{id name="IDLcheatsheet-DMMpositioning"/}}DMM positioning ==
--
--(% class="fixed-table wrapped" %)
--|=(((
--IDL command
--)))|=(((
--description
--)))|=(((
--motion
--)))
  |(((
--##**dmm_x2_rot, 0.001**##
++##**gap, 0.01**##
  )))|(((
--move 2nd crystal pitch by 0.00001 deg
++move undulator gap relative by 0.01 mm
  )))|(((
--relative [ deg ]
++relative [ mm ]
  )))
  |(((
--##**goto_dmm_x2_rot,  0.8923
--**##
++##**goto_gap, 10.0**##
  )))|(((
--move 2nd crystal pitch to 0.8923 deg
++move undulator gap absolute to 10.0 mm
  )))|(((
--absolute [ deg ]
++absolute [ mm ]
  )))
--\\
--
  == {{id name="IDLcheatsheet-Generalsyntax"/}}General syntax ==
  (% class="wrapped relative-table" style="width: 45.5603%;" %)
@@ -432,68 +432,17 @@
  prints an overview of the beamline interlock status
  )))
  |(((
--##**oh_break_ics**##
++##**ics_break_oh**##
  )))|(((
  closes all P05 beamshutters and breaks OH door interlock. P06 beamshutter must be closed for this command to work!
  )))
  |(((
--##**eh1_break_ics**##
++##**ics_break_eh1**##
  )))|(((
  closes EH1 beamshutter (and EH2 beamshutter  if open) and breaks EH1 door interlock
  )))
  |(((
--##**eh2_break_ics**##
++##**ics_break_eh2**##
  )))|(((
  closes EH2 beshutter and breaks EH2 door interlock
  )))
--
--== {{id name="IDLcheatsheet-Helpermacros"/}}Helper macros ==
--
--The helper macros may help to align a sample quickly. Mainly, these are motion commands which subsequently make an image with predefined values.
--
--(% class="wrapped" %)
--|=(((
--IDL command
--)))|=(((
--description
--)))
--|(((
--helper_object, /info
--)))|(((
--show predefined values
--)))
--|(((
--\\
--)))|(((
--\\
--)))
--|(((
--\\
--)))|(((
--\\
--)))
--|(((
--\\
--)))|(((
--\\
--)))
--|(((
--\\
--)))|(((
--\\
--)))
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--\\
--)))|(((
--\\
--)))
--|(((
--\\
--)))|(((
--\\
--)))
--|(((
--\\
--)))|(((
--\\
--)))

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Id

@@ -1,1 +1,1 @@
--365835132
++179783458

URL

@@ -1,1 +1,1 @@
--https://confluence.desy.de/spaces/P5I/pages/365835132/IDL cheat sheet
++https://confluence.desy.de/spaces/P5I/pages/179783458/IDL cheat sheet

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