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Changes for page IDL cheat sheet

Last modified by fwilde on 2025/07/15 17:44
From version 61.1
edited by fwilde
on 2025/07/15 10:48
Change comment: There is no comment for this version
To version 45.1
edited by fwilde
on 2020/10/10 12:16
Change comment: Reverted from v. 43

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Content
... ... @@ -8,7 +8,7 @@
8 8  
9 9  === {{id name="IDLcheatsheet-Relativemovement"/}}Relative movement ===
10 10  
11 -(% class="fixed-table wrapped" %)
11 +(% class="wrapped fixed-table" %)
12 12  |=(((
13 13  IDL command
14 14  )))|=(((
... ... @@ -17,7 +17,7 @@
17 17  motion
18 18  )))
19 19  |(((
20 -##**s_stage_x/z, 1**##
20 +s_stage_x/z, 1
21 21  )))|(((
22 22  move rotation stage in x/z-direction by 1 mm
23 23  )))|(((
... ... @@ -24,7 +24,7 @@
24 24  relative [ mm ]
25 25  )))
26 26  |(((
27 -##**s_pos_x/y/z, 1**##
27 +s_pos_x/y/z, 1
28 28  )))|(((
29 29  move sample stage in x/y/z-direction by 1 mm (caution with directions: stage mount on rotation axis)
30 30  )))|(((
... ... @@ -31,7 +31,7 @@
31 31  relative [ mm ]
32 32  )))
33 33  |(((
34 -##**s_pos, 1**##
34 +s_pos_lateral, 1
35 35  )))|(((
36 36  move sample stage in x-direction by 1 mm, regardless of position of rotation axis
37 37  )))|(((
... ... @@ -38,7 +38,7 @@
38 38  relative [ mm ]
39 39  )))
40 40  |(((
41 -##**s_angle, 90**##
41 +s_angle, 90
42 42  )))|(((
43 43  rotate sample around z axis
44 44  )))|(((
... ... @@ -47,7 +47,7 @@
47 47  
48 48  === {{id name="IDLcheatsheet-Absolutemovement"/}}Absolute movement ===
49 49  
50 -(% class="relative-table wrapped" style="width:67.0892%" %)
50 +(% class="relative-table wrapped" style="width: 63.4026%;" %)
51 51  |=(((
52 52  IDL command
53 53  )))|=(((
... ... @@ -56,7 +56,7 @@
56 56  motion
57 57  )))
58 58  |(((
59 -##**goto_s_stage_x/z, 1**##
59 +goto_s_stage_x/z, 1
60 60  )))|(((
61 61  move rotation stage in x/z-direction to 1 mm
62 62  )))|(((
... ... @@ -63,7 +63,7 @@
63 63  absolute [ mm ]
64 64  )))
65 65  |(((
66 -##**goto_s_pos_x/y/z, 1**##
66 +goto_s_pos_x/y/z, 1
67 67  )))|(((
68 68  move sample stage in x/y/z-direction to 1  mm
69 69  )))|(((
... ... @@ -70,9 +70,9 @@
70 70  absolute [ mm ]
71 71  )))
72 72  |(((
73 -##**goto_s_angle, 90**##
73 +goto_s_angle, 90
74 74  )))|(((
75 -rotate sample around z axis to 90° (**alias command: s_rot**)
75 +rotate sample around z axis to 90° (alias command: s_rot)
76 76  )))|(((
77 77  absolute [ deg ]
78 78  )))
... ... @@ -79,7 +79,7 @@
79 79  
80 80  === {{id name="IDLcheatsheet-Getcurrentposition"/}}Get current position ===
81 81  
82 -(% class="relative-table wrapped" style="width:54.0627%" %)
82 +(% class="relative-table wrapped" style="width: 51.477%;" %)
83 83  |=(((
84 84  IDL command
85 85  )))|=(((
... ... @@ -86,17 +86,17 @@
86 86  description
87 87  )))
88 88  |(((
89 -##**pos_s_stage_x/z()**##
89 +pos_s_stage_x/z()
90 90  )))|(((
91 91  return current rotation stage in x/z position
92 92  )))
93 93  |(((
94 -##**pos_s_pos_x/y/z()**##
94 +pos_s_pos_x/y/z()
95 95  )))|(((
96 96  return current sample stage in x/y/z position
97 97  )))
98 98  |(((
99 -##**pos_s_angle()**##
99 +pos_s_angle()
100 100  )))|(((
101 101  return current rotation stage angle
102 102  )))
... ... @@ -103,7 +103,7 @@
103 103  
104 104  === {{id name="IDLcheatsheet-Predefinedpositions"/}}Predefined positions ===
105 105  
106 -(% class="relative-table wrapped" style="width:55.721%" %)
106 +(% class="relative-table wrapped" style="width: 55.721%;" %)
107 107  |=(((
108 108  IDL command
109 109  )))|=(((
... ... @@ -110,27 +110,27 @@
110 110  description
111 111  )))
112 112  |(((
113 -##**s_in**##
113 +s_in
114 114  )))|(((
115 115  move sample to "in" position
116 116  )))
117 117  |(((
118 -##**s_out**##
118 +s_out
119 119  )))|(((
120 120  move sample to "out" position
121 121  )))
122 122  |(((
123 -##**s_change**##
123 +s_change
124 124  )))|(((
125 125  move sample to "change" position
126 126  )))
127 127  |(((
128 -##**set_s_in_pos(, 0)**##
128 +set_s_in_pos, 0
129 129  )))|(((
130 -set s_in position to current stage position, or optionally to e.g. 0.0 mm
130 +set s_in position to 0.0 mm
131 131  )))
132 132  |(((
133 -##**set_s_out_dist, 10**##
133 +set_s_out_dist, 10
134 134  )))|(((
135 135  set s_out distance to 10.0 mm
136 136  )))
... ... @@ -144,19 +144,19 @@
144 144  description
145 145  )))
146 146  |(((
147 -##**save_magn_set(, name_add)**##
147 +save_magn_set, 'dmm_11000ev_cmos_10x'
148 148  )))|(((
149 -save current magnification set, optionally add something to the automatically generated name
149 +save current magnification set
150 150  )))
151 151  |(((
152 -##**restore_magn_set(, name)**##
152 +restore_magn_set, 'dmm_11000ev_cmos_10x'
153 153  )))|(((
154 -restore last magnification set, or optionally load a file with a specific name
154 +restore magnification set with the name 'dmm_11000ev_cmos_10x'
155 155  )))
156 156  
157 157  == {{id name="IDLcheatsheet-Detectorpositioning"/}}Detector positioning ==
158 158  
159 -(% class="fixed-table wrapped" %)
159 +(% class="wrapped fixed-table" %)
160 160  |=(((
161 161  IDL command
162 162  )))|=(((
... ... @@ -165,25 +165,25 @@
165 165  motion
166 166  )))
167 167  |(((
168 -##**o_ccd_dist, 5**##
168 +pressure_on
169 169  )))|(((
170 -move detector in y direction relative by 5 mm
170 +enable detector y movement
171 171  )))|(((
172 -relative [ mm ]
172 +\\
173 173  )))
174 174  |(((
175 -##**goto_o_ccd_dist, 30**##
175 +o_ccd_dist, 5
176 176  )))|(((
177 -move detector in y direction absoilute to 30 mm
177 +move detector in y direction
178 178  )))|(((
179 -
179 +relative [ mm ]
180 180  )))
181 181  |(((
182 -##**pos_o_ccd_dist()**##
182 +pressure_off
183 183  )))|(((
184 -return current of the camera stage distance
184 +disable detector movement
185 185  )))|(((
186 -
186 +\\
187 187  )))
188 188  
189 189  == {{id name="IDLcheatsheet-Slitpositioning"/}}Slit positioning ==
... ... @@ -195,36 +195,26 @@
195 195  description
196 196  )))
197 197  |(((
198 -##**slit_oh, rx=1 (rz=1)**##
198 +slit_eh2, rx=1 (rz=1)
199 199  )))|(((
200 -moves oh slit aperture horizontally (vertically) by 1mm
200 +moves eh2 slit aperture horizontally (vertically) by 1mm , **works analoguous for slit_oh and slit_ps2**
201 201  )))
202 202  |(((
203 -##**slit_oh, rdx=1 (rdz=1)**##
203 +slit_eh2, rdz=1 (rdz=1)
204 204  )))|(((
205 -opens oh the slit aperture horizontally (vertically) by 1 mm
205 +opens eh2 the slit aperture horizontally (vertically) by 1 mm, **works analoguous for slit_oh and slit_ps2**
206 206  )))
207 207  |(((
208 -##**slit_eh2, rx=1 (rz=1)**##
208 +slit_info
209 209  )))|(((
210 -moves eh2 slit aperture horizontally (vertically) by 1 mm
211 -)))
212 -|(((
213 -##**slit_eh2, rdx=1 (rdz=1)**##
214 -)))|(((
215 -opens eh2 the slit aperture horizontally (vertically) by 1 mm
216 -)))
217 -|(((
218 -##**slit_info**##
219 -)))|(((
220 220  show all slit positions
221 221  )))
222 222  
223 223  rx, rdx, rz and rdz can be concatenated in one command (e.g. slit_oh, rx=1, rz=-2, rdx=0.5, rdz=0.5)
224 224  
225 -== {{id name="IDLcheatsheet-Makeandsaveimages"/}}Make and save images ==
215 +== {{id name="IDLcheatsheet-Makeimages"/}}Make images ==
226 226  
227 -(% class="fixed-table wrapped" %)
217 +(% class="wrapped fixed-table" %)
228 228  |=(((
229 229  IDL command
230 230  )))|=(((
... ... @@ -231,104 +231,47 @@
231 231  description
232 232  )))
233 233  |(((
234 -##**i=quick(100) & display_image, BYSTCL(i, 0, 4096)**##
224 +i=quick(100) & tv_quick, i & draw_box, [ x1, x2 ,z1 ,z2 ]
235 235  )))|(((
236 -make an image & scale image (eg. from 0 to 4096, usually from 0 to maximum value the camera can do)
226 +make an image & show image & draw box
237 237  )))
238 238  |(((
239 -##**a=quick_abs(100) & display_image, BYTSCL(a, 0, 2)**##
229 +a=quick_abs(100) & tv_quick, a & draw_box, [ x1, x2 ,z1 ,z2 ]
240 240  )))|(((
241 -make an absorption image & scale image (usually from 0 to to 2)
231 +make an absorption image & show image & draw box
242 242  )))
243 243  |(((
244 -##**write_tiff, '/gpfs/current/raw/test_projection.tif', i, /SHORT**##
234 +write_tiff, '/gpfs/current/raw/test.tif', i, /SHORT
245 245  )))|(((
246 -save i as 16-bit integer tiff in /gpfs/...
236 +save i as 16-bit tiff in /gpfs/...
247 247  )))
248 -|(((
249 -##**write_tiff, '/gpfs/current/raw/test_absorption.tif', a, /FLOAT**##
250 -)))|(((
251 -save a as 32-bit float tiff in /gpfs/...
252 -)))
253 253  
254 -== {{id name="IDLcheatsheet-Macrosmotion+images"/}}Macros motion  + images ==
239 +== {{id name="IDLcheatsheet-Monochromatorpositioning"/}}Monochromator positioning ==
255 255  
256 -These macros make images with predefined and internally saved values (like exposure time or display scale). Some move an axis first and then make an image (again with internally saved options likeexposure time, and image type). **You may use these macros to quickly align samples.**
257 -
258 -(% class="relative-table wrapped" style="width:114.69%" %)
241 +(% class="wrapped fixed-table" %)
259 259  |=(((
260 260  IDL command
261 261  )))|=(((
262 262  description
246 +)))|=(((
247 +motion
263 263  )))
264 264  |(((
265 -**{{code language="none"}}qt (, t=100, scale=[0,4096]){{/code}}**
250 +calc_dcm_energy, 10000, /set
266 266  )))|(((
267 -Quick **transmission** image at the current position. Options: set new exposure time, set new scale for image display,
268 -)))
269 -|(((
270 -**{{code language="none"}}qa (, t=100, scale=[0,2], /ref, /here){{/code}}**
252 +set DCM and undulator to 10 keV
271 271  )))|(((
272 -Quick **absorption** image at s_in position. Options: set new exposure time, set new scale for image display, make new reference image, make image at current position.
254 +\\
273 273  )))
274 274  |(((
275 -**{{code language="none"}}qp (, t=100, scale=[0,2], /ref, /here){{/code}}**
257 +dcm_pitch, 0.00001
276 276  )))|(((
277 -Quick **phase** image at s_in position. Options: set new exposure time, set new scale for image display, make new reference image, make image at current position
278 -)))
279 -|(((
280 -**{{code language="none"}}qr (, t=100, scale=[0,4096]){{/code}}**
281 -)))|(((
282 -Quick **reference image**. Options: set new exposure time,  set new scale for image display,
283 -)))
284 -|(((
285 -**{{code language="none"}}side, 90 (, t=100, /ref, /rel, /here, imgtype='a') {{/code}}**
286 -)))|(((
287 -**Rotate** (absolute degrees) and make an image at the new position. Options: set new exposure time, make new reference image, make image at current position, set image type ('a': absorption, 't': transmission, 'p' phase)
288 -)))
289 -|(((
290 -**{{code language="none"}}sshift, 2 (, t=100, /ref, /here, imgtype='a'){{/code}}**
291 -)))|(((
292 -Move **sample stage laterally** (relative, mm) and make an image at the new position. Options: set exposure time, make new reference image, , make image at current position, set image type ('a': absorption, 't': transmission, 'p' phase)
293 -)))
294 -|(((
295 -##**sz, 2 (, t=100, /ref, /here, imgtype='a')**##
296 -)))|(((
297 -Move **rotation stage up or down** (relative, mm) and make an image at the new position. Options: set exposure time, make reference image, make image at current position, set image type ('a': absorption, 't': transmission, 'p' phase)
298 -)))
299 -|(((
300 -**{{code language="none"}}zx, 2 (, t=100, /ref, /here, imgtype='a'){{/code}}**
301 -)))|(((
302 -Move **rotation stage left or right** (relative, mm) and make an image at the new position. Options: set exposure time, make reference image, make image at current position, set image type ('a': absorption, 't': transmission, 'p' phase)
303 -)))
304 -
305 -{{info title="
306 -
307 -Monochromator positioning"}}
308 -ATTENTION: Setting up a Monochromator as well as positioning front end slits is **only** done by the beamline staff!
309 -
310 -The commands above may be used by users to realign the beam should it beam profile drift with time.
311 -{{/info}}
312 -
313 -== {{id name="IDLcheatsheet-DCMpositioning"/}}DCM positioning ==
314 -
315 -(% class="fixed-table wrapped" %)
316 -|=(((
317 -IDL command
318 -)))|=(((
319 -description
320 -)))|=(((
321 -motion
322 -)))
323 -|(((
324 -##**dcm_pitch, 0.00001**##
325 -)))|(((
326 326  move 2nd crystal pitch by 0.00001 deg
327 327  )))|(((
328 328  relative [ deg ]
329 329  )))
330 330  |(((
331 -##**goto_dcm_pitch,  -0.03976**##
264 +goto_dcm_pitch,  -0.03976
332 332  )))|(((
333 333  move 2nd crystal pitch to -0.03976 deg
334 334  )))|(((
... ... @@ -335,43 +335,23 @@
335 335  absolute [ deg ]
336 336  )))
337 337  |(((
338 -##**reflex_opt_single**##
271 +reflex_opt
339 339  )))|(((
340 340  move 2nd crystal pitch to optimal flux position
341 341  )))|(((
342 -
275 +\\
343 343  )))
344 -
345 -== {{id name="IDLcheatsheet-DMMpositioning"/}}DMM positioning ==
346 -
347 -(% class="fixed-table wrapped" %)
348 -|=(((
349 -IDL command
350 -)))|=(((
351 -description
352 -)))|=(((
353 -motion
354 -)))
355 355  |(((
356 -##**dmm_x2_rot, 0.001**##
278 +gap, 0.01
357 357  )))|(((
358 -move 2nd crystal pitch by 0.00001 deg
280 +move undulator gap by 0.01 mm
359 359  )))|(((
360 -relative [ deg ]
282 +relative [ mm ]
361 361  )))
362 -|(((
363 -##**goto_dmm_x2_rot,  0.8923**##
364 -)))|(((
365 -move 2nd crystal pitch to 0.8923 deg
366 -)))|(((
367 -absolute [ deg ]
368 -)))
369 369  
370 -
371 -
372 372  == {{id name="IDLcheatsheet-Generalsyntax"/}}General syntax ==
373 373  
374 -(% class="relative-table wrapped" style="width:45.5603%" %)
287 +(% class="wrapped relative-table" style="width: 51.5317%;" %)
375 375  |=(((
376 376  Functionality
377 377  )))|=(((
... ... @@ -378,7 +378,7 @@
378 378  IDL syntax
379 379  )))
380 380  |(((
381 -chaining commands
294 +Chaining commands
382 382  )))|(((
383 383  command_1 **&** command_2 **&** ...
384 384  )))
... ... @@ -400,7 +400,7 @@
400 400  
401 401  == {{id name="IDLcheatsheet-BeamshutterandInterlockcontrol"/}}Beamshutter and Interlock control ==
402 402  
403 -(% class="relative-table wrapped" style="width:75.0455%" %)
316 +(% class="wrapped" %)
404 404  |=(((
405 405  IDL command
406 406  )))|=(((
... ... @@ -407,55 +407,42 @@
407 407  description
408 408  )))
409 409  |(((
410 -##**bs_info**##
323 +bs_info
411 411  )))|(((
412 412  prints an overview of the beamline beamshutter status
413 413  )))
414 414  |(((
415 -##**bsoh_open / bsoh_close**##
328 +bsoh_open / bsoh_close
416 416  )))|(((
417 417  opens / closes the optics hutch beamshutter. Closing the OH beamshutter will close all following beamshutters (EH1, EH2)
418 418  )))
419 419  |(((
420 -##**bseh1_open / bseh1_close**##
333 +bseh1_open / bseh1_close
421 421  )))|(((
422 422  opens / closes the EH1 beamshutter. Opening will open the OH beamshutter as well. Closing the OH beamshutter will the EH2 beamshutter as well
423 423  )))
424 424  |(((
425 -##**bseh2_open / bseh2_close**##
338 +bseh2_open / bseh2_close
426 426  )))|(((
427 427  opens / closes the EH2 beamshutter. Openening will open the OH and EH1 beamshutters as well.
428 428  )))
429 429  |(((
430 -##**ics_info**##
343 +ics_info
431 431  )))|(((
432 432  prints an overview of the beamline interlock status
433 433  )))
434 434  |(((
435 -##**oh_break_ics**##
348 +ics_break_oh
436 436  )))|(((
437 437  closes all P05 beamshutters and breaks OH door interlock. P06 beamshutter must be closed for this command to work!
438 438  )))
439 439  |(((
440 -##**eh1_break_ics**##
353 +ics_break_eh1
441 441  )))|(((
442 442  closes EH1 beamshutter (and EH2 beamshutter  if open) and breaks EH1 door interlock
443 443  )))
444 444  |(((
445 -##**eh2_break_ics**##
358 +ics_break_eh2
446 446  )))|(((
447 -closes EH2 beamshutter and breaks EH2 door interlock
360 +closes EH2 beshutter and breaks EH2 door interlock
448 448  )))
449 -
450 -== Serialscan Macros ==
451 -
452 -General remarks: The serialscan macros save
453 -
454 -|=IDL command|=Description
455 -|##**ss_init**##|Reset table and scan settings
456 -|**##ss_info##**|Print current stage positions and scan parameters
457 -|**##ss_pos, nr, name, dist, sz, sx, sy, dz, ndz, /fetch, /force, /all, /prot##**|Modify sample parameters
458 -|**##ss_insert, nr, /nosamplechanger##**|Insert sample with settings from table
459 -|**ss_remove**|Remove sample with sample changer
460 -
461 -
p05_uct.png
Author
... ... @@ -1,1 +1,0 @@
1 -XWiki.fwilde
Size
... ... @@ -1,1 +1,0 @@
1 -1022.2 KB
Content
Confluence.Code.ConfluencePageClass[0]
Id
... ... @@ -1,1 +1,1 @@
1 -87353119
1 +179783453
URL
... ... @@ -1,1 +1,1 @@
1 -https://confluence.desy.de/spaces/P5I/pages/87353119/IDL cheat sheet
1 +https://confluence.desy.de/spaces/P5I/pages/179783453/IDL cheat sheet