Changes for page CFEL TapeDrive: Serial Crystallography
Last modified by chatzies on 2025-11-27 11:35
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... ... @@ -1,17 +5,7 @@ 1 - 2 - 3 -{{toc/}} 4 - 5 5 [[image:attach:TapeDrive_beschriftet.PNG||height="400"]][[image:attach:TapeDrive scheme.png||height="400"]] 6 6 7 - \\3 +**14.1 Revert from Crystallography to TapeDrive (P11 staff/CFEL)** 8 8 9 -\\ 10 - 11 -\\ 12 - 13 -=== {{id name="14.SerialCrystallography:CFELTapeDrive-14.1RevertfromCrystallographytoTapeDrive(P11staff/CFEL)"/}}**14.1 Revert from Crystallography to TapeDrive (P11 staff/CFEL)** === 14 - 15 15 * remove vortex 16 16 * beamstop to out-position? 17 17 * remove goniometer. The airbearing should be stopped (p11/servermotor/eh.1.01) ... ... @@ -60,7 +60,7 @@ 60 60 61 61 \\ 62 62 63 - === {{id name="14.SerialCrystallography:CFELTapeDrive-14.2Samplecharacteristicsandpreparation"/}}**14.2 Sample characteristics and preparation**===53 +**14.2 Sample characteristics and preparation** 64 64 65 65 suspension of microcrystals, **at least** 200 µL with 20% crystal density(more is always better), size range: 2-30 µm, **tip:** bring some mother liquor for washing, filtering, diluting etc. 66 66 ... ... @@ -72,106 +72,33 @@ 72 72 73 73 \\ 74 74 75 - === {{id name="14.SerialCrystallography:CFELTapeDrive-14.3ConnectingsampletoElveFlow,sampleexchange"/}}**14.3 Connecting sample to ElveFlow, sample exchange76 -** ===65 +**14.3 Connecting sample to ElveFlow, sample exchange 66 +** 77 77 78 - After filtration, screwthe ElveFlowconnector to your Eppendorf or Falcontube.Make sure that theyellow-ish linegoes to the bottomof your tube. You can adjustthe lengthby unscrewingthe blue fittingontopand pushing/pullingtheyellow-ish line. **Don't forget to tigthenthe blue fitting afterwards!**68 +[[image:attach:20211201_095033.jpg||thumbnail="true" height="250"]][[image:attach:20211201_095205.jpg||height="250"]][[image:attach:20211201_095232.jpg||height="250"]] 79 79 80 -Be aware to which channel and nozzle line your sample is connected. 81 - 82 - Red → Channel 1, crystal line (nozzle capillary without marks) 83 - 84 - Green → Channel 2, substrate line (nozzle capillary is marked in black) 85 - 86 -[[image:attach:20211201_095033.jpg||thumbnail="true" height="250"]] 87 - 88 88 \\ 89 89 90 90 \\ 91 91 92 - === {{id name="14.SerialCrystallography:CFELTapeDrive-14.4TapeDriveoperation"/}}**14.4 TapeDrive operation93 -** ===74 +**14.4 TapeDrive operation 75 +** 94 94 95 -The TapeDrive is controlled through kamzik. To open kamzik, start the server. A terminal will open andshortly after a small window.77 +The TapeDrive is controlled through kamzik. To open kamzik, start the server. A terminal will open, shortly after a small window. 96 96 Now start the client. Same thing, a terminal will open, shortly after a small window. 97 97 98 -Click 'Devices' in the **client session** to open the control window. 99 -[[image:attach:screen.PNG||height="250"]][[image:attach:server client.PNG||height="250"]] 80 +* **Tape:** 81 +** Click on the 'main tape' icon 82 +** Change the velocity by typing anything from 0.3-3.0 mm/s 83 +** Common velocity is 1.0-1.5 mm/s 84 +** [[image:attach:kamzik_tape.PNG||height="400"]] 100 100 101 -**Tape** 102 - 103 -* Click on the 'main tape' icon 104 -* Change the velocity by typing anything from **0.3-3.0 mm/s** 105 -* Common velocity is 1.0-1.5 mm/s 106 -* kamzik displays the used tape in m and %. At 98% the tape will automatically stop since the rolls need to be exchanged at this point. 107 107 \\ 108 -* [[image:attach:kamzik_tape.PNG||height="400"]] 109 109 110 -==== {{id name="14.SerialCrystallography:CFELTapeDrive-Samplenozzle:"/}}**Sample nozzle:** ==== 111 - 112 -* Click an the 'nozzle' icon. 113 -* ((( 114 -The nozzle position can be adjusted in xyz by clicking on the arrows up and down. (Double arrow = 10 steps). Step size can be varied, 1mm steps are rather big and should be used carefully. 115 -The absolute position is **not calibrated** and therefore changes after each restart of kamzik. 116 -\\(% style="color: rgb(255,0,0);" %)**!!! **(% style="color: rgb(255, 0, 0); color: rgb(0, 0, 0)" %)**During data collection make sure in which direction you are moving, do not move nozzle into beam**(% style="color: rgb(255,0,0);" %)** !!!**(%%) 117 -\\Adjust the nozzle position by eye until it nearly touches the tape and roughly meets the X-ray interaction point. Then, move to the control hutch to use the on-axis microscope for fine adjustment. Move the nozzle tip to the beam position (red X) and write down the absolut nozzle position. From there move the nozzle in +x to your desired distance.Different distances combined with the tape speed result in several delay times for time-resolved experiments. 118 - 119 -(% class="wrapped" %) 120 -|=((( 121 121 \\ 122 -)))|=((( 123 -direction 124 -)))|=((( 125 -recommended step size 126 -for visual adjustment 127 -)))|=(% colspan="1" %)((( 128 -recommended step size 129 -during data collection 130 -))) 131 -|((( 132 -+x 133 -)))|((( 134 -away from X-ray interaction point 135 -)))|((( 136 -1.0 - 0.5 mm 137 -)))|(% colspan="1" %)((( 138 -0.1 - 0.2 mm 139 -))) 140 -|((( 141 -+y 142 -)))|((( 143 -up 144 -)))|((( 145 -1.0 - 0.5 mm 146 -)))|(% colspan="1" %)((( 147 -0.1 - 0.2 mm 148 -))) 149 -|((( 150 -+z 151 -)))|((( 152 -towards detector tower, away from tape 153 -)))|((( 154 -0.5 - 0.2 mm 155 -)))|(% colspan="1" %)((( 156 -0.1 - 0.2 mm 157 -be careful with -z, tape could be pushed out of focus 158 -))) 159 159 160 -** 161 -\\** 162 -))) 163 -* [[image:attach:kamzik_nozzle.PNG||height="400"]] 164 - 165 -==== {{id name="14.SerialCrystallography:CFELTapeDrive-Temperaturecontrol/Chiller"/}}**Temperature control/Chiller** ==== 166 - 167 167 \\ 168 168 169 -\\ 170 - 171 -\\ 172 - 173 -\\ 174 - 175 175 Once the hutch is interlocked, set remote control to the TapeDrive laptop by opening a terminal and executing the following command: 176 176 177 177 xfreerdp +clipboard /size:1920x1080 /u:Cfelusr /v:cfeld-pcx22611 ... ... @@ -182,24 +182,10 @@ 182 182 183 183 \\ 184 184 185 - ==== {{id name="14.SerialCrystallography:CFELTapeDrive-14.5Taperollexchange"/}}**14.5 Tape roll exchange**====102 +**14.5 Tape roll exchange** 186 186 187 - The tapestopsautomatically at98% used length, if you need to changethe rolls for orther reasons, stopthetape (velocity=0.0 mm/s).104 +**[[image:attach:20211201_094111.jpg||height="250"]][[image:attach:20211201_094101.jpg||height="250"]]** 188 188 189 -* Remove the (almost) empty feeder roll by pulling it upwards. 190 -* Cut the tape with some cm overlap to glue to the new roll. **Do not discard empty roll!** 191 -* Get a new tape roll (bottom left on the cart). **Polypropylen 15 µm** 192 -* Cut the first cm of the new tape roll, directly before the black sticky part. 193 -* Use this sticky part to attach the end of the old tape to the new roll. Place new roll on roll holder. 194 -* Open magnetic tape stabilizer. 195 -* Start the tape (3mm/s). Once the connetion side (black sticky part) has arrived at the collector roll, stop the tape (0mm/s). 196 -* Again, cut the tape directly in front of the black mark. Replace the the old roll with the **empty **one. Old roll can be discarded. 197 -* Attach new tape to the empty roll by using the black sticky part. 198 -* Close tape stabilizer. 199 - 200 -**[[image:attach:20211201_094101.jpg||height="250"]][[image:attach:20211201_094111.jpg||height="250"]] 201 -** 202 - 203 203 \\ 204 204 205 205 \\
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... ... @@ -1,1 +1,1 @@ 1 -23503 94641 +235036643 - URL
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... ... @@ -1,1 +1,1 @@ 1 -https://confluence.desy.de/spaces/11/pages/23503 9464/14. Serial Crystallography: CFEL TapeDrive1 +https://confluence.desy.de/spaces/11/pages/235036643/14. Serial Crystallography: CFEL TapeDrive